RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ROCK1Q13464 1354 aa24.86■■□□□ 1.57
TSPAN4-208ENST00000409531 ZMYM3Q14202 1370 aa24.86■■□□□ 1.57
TSPAN4-208ENST00000409531 ANKRD30AQ9BXX3 1397 aa24.86■■□□□ 1.57
TSPAN4-208ENST00000409531 KIF15Q9NS87 1388 aa24.83■■□□□ 1.57
TSPAN4-208ENST00000409531 NCOA1Q15788 1441 aa24.82■■□□□ 1.56
TSPAN4-208ENST00000409531 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
TSPAN4-208ENST00000409531 WASHC2CQ9Y4E1 1318 aa24.8■■□□□ 1.56
TSPAN4-208ENST00000409531 SETD1BQ9UPS6 1966 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-208ENST00000409531 C3P01024 1663 aa24.78■■□□□ 1.56
TSPAN4-208ENST00000409531 LMTK3Q96Q04 1460 aa24.78■■□□□ 1.56
TSPAN4-208ENST00000409531 GCC2Q8IWJ2 1684 aa24.76■■□□□ 1.55
TSPAN4-208ENST00000409531 HFM1A2PYH4 1435 aa24.76■■□□□ 1.55
TSPAN4-208ENST00000409531 MROH2AA6NES4 1674 aa24.76■■□□□ 1.55
TSPAN4-208ENST00000409531 CLTCQ00610 1675 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-208ENST00000409531 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
TSPAN4-208ENST00000409531 ERBINQ96RT1 1412 aa24.74■■□□□ 1.55
TSPAN4-208ENST00000409531 HSPA2P54652 639 aa24.73■■□□□ 1.55
TSPAN4-208ENST00000409531 NPATQ14207 1427 aa24.73■■□□□ 1.55
TSPAN4-208ENST00000409531 EIF2AK4Q9P2K8 1649 aaKnown RBP24.73■■□□□ 1.55
TSPAN4-208ENST00000409531 FAM135AQ9P2D6 1515 aa24.71■■□□□ 1.55
TSPAN4-208ENST00000409531 NAIPQ13075 1403 aa24.71■■□□□ 1.55
TSPAN4-208ENST00000409531 UHRF1BP1Q6BDS2 1440 aa24.7■■□□□ 1.54
TSPAN4-208ENST00000409531 KDM5DQ9BY66 1539 aa24.7■■□□□ 1.54
TSPAN4-208ENST00000409531 RNF17Q9BXT8 1623 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-208ENST00000409531 ANKRD50Q9ULJ7 1429 aa24.68■■□□□ 1.54
TSPAN4-208ENST00000409531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.67■■□□□ 1.54
TSPAN4-208ENST00000409531 PREX1Q8TCU6 1659 aa24.67■■□□□ 1.54
TSPAN4-208ENST00000409531 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
TSPAN4-208ENST00000409531 FBXO31Q5XUX0 539 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-208ENST00000409531 ACIN1Q9UKV3 1341 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-208ENST00000409531 PZPP20742 1482 aa24.62■■□□□ 1.53
TSPAN4-208ENST00000409531 MROH1Q8NDA8 1641 aa24.62■■□□□ 1.53
TSPAN4-208ENST00000409531 ABCC3O15438 1527 aa24.62■■□□□ 1.53
TSPAN4-208ENST00000409531 KANK1Q14678 1352 aa24.62■■□□□ 1.53
TSPAN4-208ENST00000409531 PRDM15P57071 1507 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-208ENST00000409531 TNRQ92752 1358 aa24.57■■□□□ 1.52
TSPAN4-208ENST00000409531 RAB3GAP2Q9H2M9 1393 aa24.57■■□□□ 1.52
TSPAN4-208ENST00000409531 ZC3H13Q5T200 1668 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-208ENST00000409531 HRCP23327 699 aa24.57■■□□□ 1.52
TSPAN4-208ENST00000409531 CERKQ8TCT0 537 aa24.56■■□□□ 1.52
TSPAN4-208ENST00000409531 DEPDC5O75140 1603 aa24.55■■□□□ 1.52
TSPAN4-208ENST00000409531 ARHGAP31Q2M1Z3 1444 aa24.53■■□□□ 1.52
TSPAN4-208ENST00000409531 UNC13BO14795 1591 aa24.52■■□□□ 1.52
TSPAN4-208ENST00000409531 DMRT2Q9Y5R5 561 aa24.51■■□□□ 1.51
TSPAN4-208ENST00000409531 CEP152O94986 1710 aa24.5■■□□□ 1.51
TSPAN4-208ENST00000409531 VWDEQ8N2E2 1590 aa24.49■■□□□ 1.51
TSPAN4-208ENST00000409531 CAMSAP1Q5T5Y3 1602 aa24.48■■□□□ 1.51
TSPAN4-208ENST00000409531 MYO3AQ8NEV4 1616 aa24.48■■□□□ 1.51
TSPAN4-208ENST00000409531 LMTK2Q8IWU2 1503 aa24.48■■□□□ 1.51
TSPAN4-208ENST00000409531 A2ML1A8K2U0 1454 aa24.48■■□□□ 1.51
TSPAN4-208ENST00000409531 ERVK-7P63135 1459 aa24.47■■□□□ 1.51
TSPAN4-208ENST00000409531 ILDR2Q71H61 639 aa24.47■■□□□ 1.51
TSPAN4-208ENST00000409531 CEP170BQ9Y4F5 1589 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-208ENST00000409531 TRIM52Q96A61 297 aa24.46■■□□□ 1.51
TSPAN4-208ENST00000409531 SPATA31D1Q6ZQQ2 1576 aa24.46■■□□□ 1.51
TSPAN4-208ENST00000409531 NLRP1Q9C000 1473 aa24.45■■□□□ 1.51
TSPAN4-208ENST00000409531 THEMISQ8N1K5 641 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-208ENST00000409531 IQGAP3Q86VI3 1631 aa24.43■■□□□ 1.5
TSPAN4-208ENST00000409531 NUP155O75694 1391 aa24.43■■□□□ 1.5
TSPAN4-208ENST00000409531 CFAP65Q6ZU64 1925 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-208ENST00000409531 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-208ENST00000409531 STRCQ7RTU9 1775 aa24.42■■□□□ 1.5
TSPAN4-208ENST00000409531 DISP3Q9P2K9 1392 aa24.41■■□□□ 1.5
TSPAN4-208ENST00000409531 PKD2Q13563 968 aa24.41■■□□□ 1.5
TSPAN4-208ENST00000409531 NCKAP5LQ9HCH0 1330 aa24.4■■□□□ 1.5
TSPAN4-208ENST00000409531 PLA2R1Q13018 1463 aa24.4■■□□□ 1.5
TSPAN4-208ENST00000409531 PTPRTO14522 1441 aa24.37■■□□□ 1.49
TSPAN4-208ENST00000409531 EFCAB6Q5THR3 1501 aa24.37■■□□□ 1.49
TSPAN4-208ENST00000409531 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
TSPAN4-208ENST00000409531 RPRD2Q5VT52 1461 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-208ENST00000409531 TET3O43151 1660 aa24.35■■□□□ 1.49
TSPAN4-208ENST00000409531 IDI1Q13907 227 aa24.35■■□□□ 1.49
TSPAN4-208ENST00000409531 ANKLE2Q86XL3 938 aa24.35■■□□□ 1.49
TSPAN4-208ENST00000409531 NOS1P29475 1434 aa24.34■■□□□ 1.49
TSPAN4-208ENST00000409531 SLC4A1APQ9BWU0 796 aaKnown RBP24.34■■□□□ 1.49
TSPAN4-208ENST00000409531 SLC52A1Q9NWF4 448 aa24.34■■□□□ 1.49
TSPAN4-208ENST00000409531 SOCS7O14512 581 aa24.32■■□□□ 1.48
TSPAN4-208ENST00000409531 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
TSPAN4-208ENST00000409531 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
TSPAN4-208ENST00000409531 DHX57Q6P158 1386 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-208ENST00000409531 E9PCH4 1651 aa24.25■■□□□ 1.47
TSPAN4-208ENST00000409531 SYNMO15061 1565 aa24.25■■□□□ 1.47
TSPAN4-208ENST00000409531 UBR1Q8IWV7 1749 aa24.22■■□□□ 1.47
TSPAN4-208ENST00000409531 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
TSPAN4-208ENST00000409531 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
TSPAN4-208ENST00000409531 EID1Q9Y6B2 187 aa24.21■■□□□ 1.47
TSPAN4-208ENST00000409531 LTKP29376 864 aa24.2■■□□□ 1.46
TSPAN4-208ENST00000409531 TMEM2Q9UHN6 1383 aa24.19■■□□□ 1.46
TSPAN4-208ENST00000409531 MED14O60244 1454 aa24.19■■□□□ 1.46
TSPAN4-208ENST00000409531 ARHGAP23Q9P227 1491 aa24.18■■□□□ 1.46
TSPAN4-208ENST00000409531 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-208ENST00000409531 SLIT1O75093 1534 aa24.18■■□□□ 1.46
TSPAN4-208ENST00000409531 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
TSPAN4-208ENST00000409531 KDM5AP29375 1690 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-208ENST00000409531 NEURL4Q96JN8 1562 aa24.16■■□□□ 1.46
TSPAN4-208ENST00000409531 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
TSPAN4-208ENST00000409531 CHGAP10645 457 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-208ENST00000409531 ZNF335Q9H4Z2 1342 aaPredicted RBP24.15■■□□□ 1.46
TSPAN4-208ENST00000409531 SCAF11Q99590 1463 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-208ENST00000409531 CCER1Q8TC90 406 aaPredicted RBP24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms