RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 RNF17Q9BXT8 1623 aaKnown RBP20.17■□□□□ 0.82
SUMO1-206ENST00000409368 ESF1Q9H501 851 aaKnown RBP20.16■□□□□ 0.82
SUMO1-206ENST00000409368 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
SUMO1-206ENST00000409368 DAPK1P53355 1430 aa20.15■□□□□ 0.82
SUMO1-206ENST00000409368 DUOX2Q9NRD8 1548 aa20.14■□□□□ 0.81
SUMO1-206ENST00000409368 ADRA2BP18089 450 aa20.14■□□□□ 0.81
SUMO1-206ENST00000409368 UHRF1BP1Q6BDS2 1440 aa20.13■□□□□ 0.81
SUMO1-206ENST00000409368 KDM5DQ9BY66 1539 aa20.12■□□□□ 0.81
SUMO1-206ENST00000409368 GGT6Q6P531 493 aa20.12■□□□□ 0.81
SUMO1-206ENST00000409368 KIF3BO15066 747 aa20.11■□□□□ 0.81
SUMO1-206ENST00000409368 PTPRKQ15262 1439 aa20.1■□□□□ 0.81
SUMO1-206ENST00000409368 MROH1Q8NDA8 1641 aa20.1■□□□□ 0.81
SUMO1-206ENST00000409368 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
SUMO1-206ENST00000409368 ZC3H13Q5T200 1668 aaKnown RBP20.09■□□□□ 0.81
SUMO1-206ENST00000409368 ERBINQ96RT1 1412 aa20.09■□□□□ 0.81
SUMO1-206ENST00000409368 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
SUMO1-206ENST00000409368 KIF15Q9NS87 1388 aa20.07■□□□□ 0.8
SUMO1-206ENST00000409368 HSPA2P54652 639 aa20.06■□□□□ 0.8
SUMO1-206ENST00000409368 NCOA1Q15788 1441 aa20.06■□□□□ 0.8
SUMO1-206ENST00000409368 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
SUMO1-206ENST00000409368 PZPP20742 1482 aa20.05■□□□□ 0.8
SUMO1-206ENST00000409368 STRCQ7RTU9 1775 aa20.05■□□□□ 0.8
SUMO1-206ENST00000409368 ABCC3O15438 1527 aa20.04■□□□□ 0.8
SUMO1-206ENST00000409368 PRDM15P57071 1507 aaPredicted RBP20.04■□□□□ 0.8
SUMO1-206ENST00000409368 MYO3AQ8NEV4 1616 aa20.04■□□□□ 0.8
SUMO1-206ENST00000409368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.04■□□□□ 0.81e-7■■■■■ 38.4
SUMO1-206ENST00000409368 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
SUMO1-206ENST00000409368 WASHC2CQ9Y4E1 1318 aa20.01■□□□□ 0.79
SUMO1-206ENST00000409368 CEP170BQ9Y4F5 1589 aaPredicted RBP20■□□□□ 0.79
SUMO1-206ENST00000409368 VWDEQ8N2E2 1590 aa19.98■□□□□ 0.79
SUMO1-206ENST00000409368 ARHGAP31Q2M1Z3 1444 aa19.97■□□□□ 0.79
SUMO1-206ENST00000409368 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
SUMO1-206ENST00000409368 CEP152O94986 1710 aa19.96■□□□□ 0.79
SUMO1-206ENST00000409368 SPATA31D1Q6ZQQ2 1576 aa19.96■□□□□ 0.79
SUMO1-206ENST00000409368 CAMSAP1Q5T5Y3 1602 aa19.96■□□□□ 0.79
SUMO1-206ENST00000409368 A2ML1A8K2U0 1454 aa19.96■□□□□ 0.79
SUMO1-206ENST00000409368 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
SUMO1-206ENST00000409368 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
SUMO1-206ENST00000409368 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
SUMO1-206ENST00000409368 ROCK1Q13464 1354 aa19.95■□□□□ 0.78
SUMO1-206ENST00000409368 PTPRTO14522 1441 aa19.94■□□□□ 0.78
SUMO1-206ENST00000409368 TNRQ92752 1358 aa19.94■□□□□ 0.78
SUMO1-206ENST00000409368 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
SUMO1-206ENST00000409368 RRBP1Q9P2E9 1410 aaKnown RBP19.93■□□□□ 0.78
SUMO1-206ENST00000409368 NLRP1Q9C000 1473 aa19.92■□□□□ 0.78
SUMO1-206ENST00000409368 FBXO31Q5XUX0 539 aaPredicted RBP19.92■□□□□ 0.78
SUMO1-206ENST00000409368 CHIC2Q9UKJ5 165 aa19.92■□□□□ 0.78
SUMO1-206ENST00000409368 ERVK-7P63135 1459 aa19.91■□□□□ 0.78
SUMO1-206ENST00000409368 ANKRD50Q9ULJ7 1429 aa19.9■□□□□ 0.78
SUMO1-206ENST00000409368 KANK1Q14678 1352 aa19.86■□□□□ 0.77
SUMO1-206ENST00000409368 UNC13BO14795 1591 aa19.86■□□□□ 0.77
SUMO1-206ENST00000409368 PKD2Q13563 968 aa19.85■□□□□ 0.77
SUMO1-206ENST00000409368 EFCAB6Q5THR3 1501 aa19.84■□□□□ 0.77
SUMO1-206ENST00000409368 CFAP65Q6ZU64 1925 aaKnown RBP19.83■□□□□ 0.77
SUMO1-206ENST00000409368 UGGT1Q9NYU2 1555 aa19.83■□□□□ 0.76
SUMO1-206ENST00000409368 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
SUMO1-206ENST00000409368 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
SUMO1-206ENST00000409368 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
SUMO1-206ENST00000409368 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
SUMO1-206ENST00000409368 TET3O43151 1660 aa19.8■□□□□ 0.76
SUMO1-206ENST00000409368 UBR1Q8IWV7 1749 aa19.79■□□□□ 0.76
SUMO1-206ENST00000409368 NEURL4Q96JN8 1562 aa19.79■□□□□ 0.76
SUMO1-206ENST00000409368 NOS1P29475 1434 aa19.79■□□□□ 0.76
SUMO1-206ENST00000409368 GCC2Q8IWJ2 1684 aa19.78■□□□□ 0.76
SUMO1-206ENST00000409368 LTBP4Q8N2S1 1624 aa19.78■□□□□ 0.76
SUMO1-206ENST00000409368 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
SUMO1-206ENST00000409368 MED14O60244 1454 aa19.78■□□□□ 0.76
SUMO1-206ENST00000409368 IQGAP3Q86VI3 1631 aa19.77■□□□□ 0.76
SUMO1-206ENST00000409368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.76
SUMO1-206ENST00000409368 SYNMO15061 1565 aa19.76■□□□□ 0.75
SUMO1-206ENST00000409368 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
SUMO1-206ENST00000409368 ARHGAP23Q9P227 1491 aa19.74■□□□□ 0.75
SUMO1-206ENST00000409368 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
SUMO1-206ENST00000409368 SLIT1O75093 1534 aa19.74■□□□□ 0.75
SUMO1-206ENST00000409368 CERKQ8TCT0 537 aa19.73■□□□□ 0.75
SUMO1-206ENST00000409368 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
SUMO1-206ENST00000409368 PIK3C2BO00750 1634 aa19.72■□□□□ 0.75
SUMO1-206ENST00000409368 NAIPQ13075 1403 aa19.7■□□□□ 0.74
SUMO1-206ENST00000409368 ANKLE2Q86XL3 938 aa19.7■□□□□ 0.74
SUMO1-206ENST00000409368 E9PCH4 1651 aa19.69■□□□□ 0.74
SUMO1-206ENST00000409368 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
SUMO1-206ENST00000409368 ITGAEP38570 1179 aa19.67■□□□□ 0.74
SUMO1-206ENST00000409368 SLC52A1Q9NWF4 448 aa19.67■□□□□ 0.74
SUMO1-206ENST00000409368 IQGAP1P46940 1657 aa19.67■□□□□ 0.74
SUMO1-206ENST00000409368 IDI1Q13907 227 aa19.66■□□□□ 0.74
SUMO1-206ENST00000409368 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
SUMO1-206ENST00000409368 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
SUMO1-206ENST00000409368 SCAF11Q99590 1463 aaKnown RBP19.65■□□□□ 0.74
SUMO1-206ENST00000409368 NUP155O75694 1391 aa19.64■□□□□ 0.73
SUMO1-206ENST00000409368 TMEM2Q9UHN6 1383 aa19.63■□□□□ 0.73
SUMO1-206ENST00000409368 ZNF335Q9H4Z2 1342 aaPredicted RBP19.62■□□□□ 0.73
SUMO1-206ENST00000409368 TMEM131LA2VDJ0 1609 aa19.6■□□□□ 0.73
SUMO1-206ENST00000409368 CPS1P31327 1500 aa19.6■□□□□ 0.73
SUMO1-206ENST00000409368 LTKP29376 864 aa19.59■□□□□ 0.73
SUMO1-206ENST00000409368 MYO5BQ9ULV0 1848 aa19.58■□□□□ 0.72
SUMO1-206ENST00000409368 SPHKAPQ2M3C7 1700 aa19.56■□□□□ 0.72
SUMO1-206ENST00000409368 ZFYVE9O95405 1425 aa19.56■□□□□ 0.72
SUMO1-206ENST00000409368 TXNDC2Q86VQ3 553 aa19.55■□□□□ 0.72
SUMO1-206ENST00000409368 STRCP1A6NGW2 1772 aa19.55■□□□□ 0.72
SUMO1-206ENST00000409368 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms