RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CCNB3Q8WWL7 1395 aa21.13■□□□□ 0.97
CHRNA1-203ENST00000409219 TNRQ92752 1358 aa21.12■□□□□ 0.97
CHRNA1-203ENST00000409219 PZPP20742 1482 aa21.11■□□□□ 0.97
CHRNA1-203ENST00000409219 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
CHRNA1-203ENST00000409219 KDM5DQ9BY66 1539 aa21.1■□□□□ 0.97
CHRNA1-203ENST00000409219 MBD5Q9P267 1494 aa21.09■□□□□ 0.97
CHRNA1-203ENST00000409219 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
CHRNA1-203ENST00000409219 FBXO31Q5XUX0 539 aaPredicted RBP21.08■□□□□ 0.97
CHRNA1-203ENST00000409219 PHF23Q9BUL5 403 aaPredicted RBP21.08■□□□□ 0.97
CHRNA1-203ENST00000409219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.08■□□□□ 0.97
CHRNA1-203ENST00000409219 DEPDC5O75140 1603 aa21.08■□□□□ 0.97
CHRNA1-203ENST00000409219 RTEL1-TNFRSF6BF6WH68 1400 aa21.08■□□□□ 0.96
CHRNA1-203ENST00000409219 ZNF644Q9H582 1327 aaPredicted RBP21.07■□□□□ 0.96
CHRNA1-203ENST00000409219 DHX29Q7Z478 1369 aaKnown RBP21.06■□□□□ 0.96
CHRNA1-203ENST00000409219 MED14O60244 1454 aa21.06■□□□□ 0.96
CHRNA1-203ENST00000409219 STRCP1A6NGW2 1772 aa21.06■□□□□ 0.96
CHRNA1-203ENST00000409219 IQGAP1P46940 1657 aa21.05■□□□□ 0.96
CHRNA1-203ENST00000409219 UGGT1Q9NYU2 1555 aa21.05■□□□□ 0.96
CHRNA1-203ENST00000409219 NPHP4O75161 1426 aaPredicted RBP21.04■□□□□ 0.96
CHRNA1-203ENST00000409219 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
CHRNA1-203ENST00000409219 NLRP1Q9C000 1473 aa21.03■□□□□ 0.96
CHRNA1-203ENST00000409219 RNF17Q9BXT8 1623 aaKnown RBP21.03■□□□□ 0.96
CHRNA1-203ENST00000409219 ANKLE2Q86XL3 938 aa21.03■□□□□ 0.96
CHRNA1-203ENST00000409219 SYNMO15061 1565 aa21.01■□□□□ 0.95
CHRNA1-203ENST00000409219 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
CHRNA1-203ENST00000409219 KIF3BO15066 747 aa21.01■□□□□ 0.95
CHRNA1-203ENST00000409219 EHBP1L1Q8N3D4 1523 aa21■□□□□ 0.95
CHRNA1-203ENST00000409219 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
CHRNA1-203ENST00000409219 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
CHRNA1-203ENST00000409219 THEMISQ8N1K5 641 aaPredicted RBP20.99■□□□□ 0.95
CHRNA1-203ENST00000409219 CCDC141Q6ZP82 1450 aa20.97■□□□□ 0.95
CHRNA1-203ENST00000409219 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
CHRNA1-203ENST00000409219 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
CHRNA1-203ENST00000409219 ZC3H13Q5T200 1668 aaKnown RBP20.95■□□□□ 0.94
CHRNA1-203ENST00000409219 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
CHRNA1-203ENST00000409219 CAMSAP2Q08AD1 1489 aa20.93■□□□□ 0.94
CHRNA1-203ENST00000409219 RGS17Q9UGC6 210 aaPredicted RBP20.9■□□□□ 0.94
CHRNA1-203ENST00000409219 ABCC3O15438 1527 aa20.89■□□□□ 0.93
CHRNA1-203ENST00000409219 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
CHRNA1-203ENST00000409219 UBR1Q8IWV7 1749 aa20.87■□□□□ 0.93
CHRNA1-203ENST00000409219 ERVK-7P63135 1459 aa20.87■□□□□ 0.93
CHRNA1-203ENST00000409219 ARHGEF5Q12774 1597 aa20.87■□□□□ 0.93
CHRNA1-203ENST00000409219 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
CHRNA1-203ENST00000409219 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
CHRNA1-203ENST00000409219 MROH1Q8NDA8 1641 aa20.84■□□□□ 0.93
CHRNA1-203ENST00000409219 CEP152O94986 1710 aa20.82■□□□□ 0.92
CHRNA1-203ENST00000409219 RSPH4AQ5TD94 716 aa20.81■□□□□ 0.92
CHRNA1-203ENST00000409219 EIF2AK4Q9P2K8 1649 aaKnown RBP20.81■□□□□ 0.92
CHRNA1-203ENST00000409219 ARHGAP23Q9P227 1491 aa20.79■□□□□ 0.92
CHRNA1-203ENST00000409219 MAST1Q9Y2H9 1570 aa20.79■□□□□ 0.92
CHRNA1-203ENST00000409219 SLIT1O75093 1534 aa20.78■□□□□ 0.92
CHRNA1-203ENST00000409219 CFAP65Q6ZU64 1925 aaKnown RBP20.78■□□□□ 0.92
CHRNA1-203ENST00000409219 POTEAQ6S8J7 498 aa20.75■□□□□ 0.91
CHRNA1-203ENST00000409219 LTKP29376 864 aa20.75■□□□□ 0.91
CHRNA1-203ENST00000409219 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
CHRNA1-203ENST00000409219 TSPY4P0CV99 314 aa20.74■□□□□ 0.91
CHRNA1-203ENST00000409219 TSPY10P0CW01 314 aa20.74■□□□□ 0.91
CHRNA1-203ENST00000409219 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
CHRNA1-203ENST00000409219 ROBO1Q9Y6N7 1651 aa20.73■□□□□ 0.91
CHRNA1-203ENST00000409219 MAP3K1Q13233 1512 aa20.71■□□□□ 0.91
CHRNA1-203ENST00000409219 TXNDC2Q86VQ3 553 aa20.7■□□□□ 0.9
CHRNA1-203ENST00000409219 PIK3C2BO00750 1634 aa20.7■□□□□ 0.9
CHRNA1-203ENST00000409219 PRDM15P57071 1507 aaPredicted RBP20.68■□□□□ 0.9
CHRNA1-203ENST00000409219 TMEM94Q12767 1356 aa20.67■□□□□ 0.9
CHRNA1-203ENST00000409219 ARHGAP31Q2M1Z3 1444 aa20.67■□□□□ 0.9
CHRNA1-203ENST00000409219 DUOX2Q9NRD8 1548 aa20.65■□□□□ 0.9
CHRNA1-203ENST00000409219 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
CHRNA1-203ENST00000409219 TMEM2Q9UHN6 1383 aa20.63■□□□□ 0.89
CHRNA1-203ENST00000409219 LRRC9Q6ZRR7 1453 aa20.63■□□□□ 0.89
CHRNA1-203ENST00000409219 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
CHRNA1-203ENST00000409219 NWD1Q149M9 1564 aa20.61■□□□□ 0.89
CHRNA1-203ENST00000409219 EFCAB6Q5THR3 1501 aa20.6■□□□□ 0.89
CHRNA1-203ENST00000409219 TET3O43151 1660 aa20.6■□□□□ 0.89
CHRNA1-203ENST00000409219 PHLPP1O60346 1717 aa20.6■□□□□ 0.89
CHRNA1-203ENST00000409219 NKTRP30414 1462 aaKnown RBP20.59■□□□□ 0.89
CHRNA1-203ENST00000409219 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.88
CHRNA1-203ENST00000409219 KCNA6P17658 529 aa20.57■□□□□ 0.88
CHRNA1-203ENST00000409219 RBM33Q96EV2 1170 aaKnown RBP20.57■□□□□ 0.88
CHRNA1-203ENST00000409219 ERBINQ96RT1 1412 aa20.57■□□□□ 0.88
CHRNA1-203ENST00000409219 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
CHRNA1-203ENST00000409219 MYOM3Q5VTT5 1437 aa20.55■□□□□ 0.88
CHRNA1-203ENST00000409219 COL16A1Q07092 1604 aaPredicted RBP20.54■□□□□ 0.88
CHRNA1-203ENST00000409219 PROSER2Q86WR7 435 aaPredicted RBP20.54■□□□□ 0.88
CHRNA1-203ENST00000409219 SLC26A8Q96RN1 970 aa20.54■□□□□ 0.88
CHRNA1-203ENST00000409219 JCADQ9P266 1359 aa20.54■□□□□ 0.88
CHRNA1-203ENST00000409219 STAG3Q9UJ98 1225 aa20.53■□□□□ 0.88
CHRNA1-203ENST00000409219 ADGRB3O60242 1522 aa20.52■□□□□ 0.88
CHRNA1-203ENST00000409219 MSH6P52701 1360 aa20.51■□□□□ 0.87
CHRNA1-203ENST00000409219 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
CHRNA1-203ENST00000409219 LRP6O75581 1613 aa20.5■□□□□ 0.87
CHRNA1-203ENST00000409219 IDI1Q13907 227 aa20.5■□□□□ 0.87
CHRNA1-203ENST00000409219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRNA1-203ENST00000409219 ABCC5O15440 1437 aa20.47■□□□□ 0.87
CHRNA1-203ENST00000409219 SLAIN2Q9P270 581 aa20.47■□□□□ 0.87
CHRNA1-203ENST00000409219 CHD2O14647 1828 aaKnown RBP20.47■□□□□ 0.87
CHRNA1-203ENST00000409219 NOS1P29475 1434 aa20.46■□□□□ 0.87
CHRNA1-203ENST00000409219 VPS8Q8N3P4 1428 aa20.46■□□□□ 0.87
CHRNA1-203ENST00000409219 KANK1Q14678 1352 aa20.46■□□□□ 0.87
CHRNA1-203ENST00000409219 RRP7BPQ9NSQ0 103 aa20.46■□□□□ 0.87
CHRNA1-203ENST00000409219 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms