RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
LRRTM1-202ENST00000409148 SPAG9O60271 1321 aaKnown RBP24.02■■□□□ 1.44
LRRTM1-202ENST00000409148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.43
LRRTM1-202ENST00000409148 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
LRRTM1-202ENST00000409148 KDM5CP41229 1560 aa23.98■■□□□ 1.43
LRRTM1-202ENST00000409148 USP47Q96K76 1375 aa23.97■■□□□ 1.43
LRRTM1-202ENST00000409148 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
LRRTM1-202ENST00000409148 INO80Q9ULG1 1556 aaPredicted RBP23.96■■□□□ 1.43
LRRTM1-202ENST00000409148 C11orf95C9JLR9 678 aaPredicted RBP23.96■■□□□ 1.43
LRRTM1-202ENST00000409148 ADGRL1O94910 1474 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 ATP7AQ04656 1500 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 AFAP1Q8N556 730 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 ATP10AO60312 1499 aa23.95■■□□□ 1.42
LRRTM1-202ENST00000409148 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
LRRTM1-202ENST00000409148 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
LRRTM1-202ENST00000409148 DCAF11Q8TEB1 546 aa23.92■■□□□ 1.42
LRRTM1-202ENST00000409148 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
LRRTM1-202ENST00000409148 SCAPERQ9BY12 1400 aa23.91■■□□□ 1.42
LRRTM1-202ENST00000409148 KDM2AQ9Y2K7 1162 aa23.89■■□□□ 1.42
LRRTM1-202ENST00000409148 CARD11Q9BXL7 1154 aa23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 CFAP74Q9C0B2 1584 aa23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 BCORL1Q5H9F3 1711 aa23.88■■□□□ 1.41
LRRTM1-202ENST00000409148 EIF2AK4Q9P2K8 1649 aaKnown RBP23.86■■□□□ 1.41
LRRTM1-202ENST00000409148 TRPM1Q7Z4N2 1603 aa23.85■■□□□ 1.41
LRRTM1-202ENST00000409148 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
LRRTM1-202ENST00000409148 E9PCH4 1651 aa23.84■■□□□ 1.41
LRRTM1-202ENST00000409148 A2MP01023 1474 aa23.84■■□□□ 1.41
LRRTM1-202ENST00000409148 ROCK2O75116 1388 aaKnown RBP23.82■■□□□ 1.4
LRRTM1-202ENST00000409148 TET3O43151 1660 aa23.82■■□□□ 1.4
LRRTM1-202ENST00000409148 KANK1Q14678 1352 aa23.81■■□□□ 1.4
LRRTM1-202ENST00000409148 ZNF518AQ6AHZ1 1483 aa23.81■■□□□ 1.4
LRRTM1-202ENST00000409148 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
LRRTM1-202ENST00000409148 MYT1LQ9UL68 1186 aa23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 DHX29Q7Z478 1369 aaKnown RBP23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 VWDEQ8N2E2 1590 aa23.8■■□□□ 1.4
LRRTM1-202ENST00000409148 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
LRRTM1-202ENST00000409148 TRPM2O94759 1503 aa23.79■■□□□ 1.4
LRRTM1-202ENST00000409148 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 SPHKAPQ2M3C7 1700 aa23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 LAMC1P11047 1609 aa23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 KIDINS220Q9ULH0 1771 aa23.78■■□□□ 1.4
LRRTM1-202ENST00000409148 PRDM15P57071 1507 aaPredicted RBP23.77■■□□□ 1.4
LRRTM1-202ENST00000409148 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
LRRTM1-202ENST00000409148 PTPRTO14522 1441 aa23.74■■□□□ 1.39
LRRTM1-202ENST00000409148 CEP152O94986 1710 aa23.74■■□□□ 1.39
LRRTM1-202ENST00000409148 KIF3BO15066 747 aa23.73■■□□□ 1.39
LRRTM1-202ENST00000409148 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
LRRTM1-202ENST00000409148 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
LRRTM1-202ENST00000409148 POGZQ7Z3K3 1410 aa23.72■■□□□ 1.39
LRRTM1-202ENST00000409148 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
LRRTM1-202ENST00000409148 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
LRRTM1-202ENST00000409148 MLH3Q9UHC1 1453 aa23.68■■□□□ 1.38
LRRTM1-202ENST00000409148 HECW2Q9P2P5 1572 aa23.67■■□□□ 1.38
LRRTM1-202ENST00000409148 NEO1Q92859 1461 aa23.67■■□□□ 1.38
LRRTM1-202ENST00000409148 RNF17Q9BXT8 1623 aaKnown RBP23.67■■□□□ 1.38
LRRTM1-202ENST00000409148 STAC3Q96MF2 364 aa23.66■■□□□ 1.38
LRRTM1-202ENST00000409148 EFCAB6Q5THR3 1501 aa23.65■■□□□ 1.38
LRRTM1-202ENST00000409148 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
LRRTM1-202ENST00000409148 NEURL4Q96JN8 1562 aa23.64■■□□□ 1.38
LRRTM1-202ENST00000409148 MADDQ8WXG6 1647 aa23.64■■□□□ 1.37
LRRTM1-202ENST00000409148 LMTK2Q8IWU2 1503 aa23.64■■□□□ 1.37
LRRTM1-202ENST00000409148 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
LRRTM1-202ENST00000409148 SUPT16HQ9Y5B9 1047 aaKnown RBP23.63■■□□□ 1.37
LRRTM1-202ENST00000409148 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
LRRTM1-202ENST00000409148 CCDC184Q52MB2 194 aa23.6■■□□□ 1.37
LRRTM1-202ENST00000409148 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
LRRTM1-202ENST00000409148 FRMPD1Q5SYB0 1578 aa23.58■■□□□ 1.37
LRRTM1-202ENST00000409148 COL17A1Q9UMD9 1497 aaPredicted RBP23.57■■□□□ 1.36
LRRTM1-202ENST00000409148 ABCA6Q8N139 1617 aa23.57■■□□□ 1.36
LRRTM1-202ENST00000409148 MAP3K4Q9Y6R4 1608 aa23.57■■□□□ 1.36
LRRTM1-202ENST00000409148 KIF1BO60333 1816 aa23.56■■□□□ 1.36
LRRTM1-202ENST00000409148 KTN1Q86UP2 1357 aaKnown RBP23.54■■□□□ 1.36
LRRTM1-202ENST00000409148 GLI2P10070 1586 aa23.54■■□□□ 1.36
LRRTM1-202ENST00000409148 IQGAP1P46940 1657 aa23.53■■□□□ 1.36
LRRTM1-202ENST00000409148 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
LRRTM1-202ENST00000409148 KIAA1210Q9ULL0 1709 aa23.52■■□□□ 1.36
LRRTM1-202ENST00000409148 TESK2Q96S53 571 aa23.51■■□□□ 1.35
LRRTM1-202ENST00000409148 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
LRRTM1-202ENST00000409148 DIP2BQ9P265 1576 aa23.5■■□□□ 1.35
LRRTM1-202ENST00000409148 MYOM2P54296 1465 aa23.49■■□□□ 1.35
LRRTM1-202ENST00000409148 UGGT1Q9NYU2 1555 aa23.49■■□□□ 1.35
LRRTM1-202ENST00000409148 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
LRRTM1-202ENST00000409148 NEFLP07196 543 aa23.48■■□□□ 1.35
LRRTM1-202ENST00000409148 TMF1P82094 1093 aa23.48■■□□□ 1.35
LRRTM1-202ENST00000409148 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 DISP3Q9P2K9 1392 aa23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 SCAF11Q99590 1463 aaKnown RBP23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
LRRTM1-202ENST00000409148 RALBP1Q15311 655 aa23.46■■□□□ 1.35
LRRTM1-202ENST00000409148 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.35
LRRTM1-202ENST00000409148 ABCC3O15438 1527 aa23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 GGT6Q6P531 493 aa23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 MROH2AA6NES4 1674 aa23.45■■□□□ 1.34
LRRTM1-202ENST00000409148 KIF13AQ9H1H9 1805 aa23.44■■□□□ 1.34
LRRTM1-202ENST00000409148 NPATQ14207 1427 aa23.44■■□□□ 1.34
LRRTM1-202ENST00000409148 ZBED9Q6R2W3 1325 aa23.44■■□□□ 1.34
LRRTM1-202ENST00000409148 ADGRB3O60242 1522 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms