RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ADGRL2O95490 1459 aa31.79■■■□□ 2.68
PDGFA-204ENST00000405692 ERBINQ96RT1 1412 aa31.79■■■□□ 2.68
PDGFA-204ENST00000405692 ZMYM3Q14202 1370 aa31.78■■■□□ 2.68
PDGFA-204ENST00000405692 WASHC2CQ9Y4E1 1318 aa31.75■■■□□ 2.67
PDGFA-204ENST00000405692 RRBP1Q9P2E9 1410 aaKnown RBP31.75■■■□□ 2.67
PDGFA-204ENST00000405692 C3P01024 1663 aa31.75■■■□□ 2.67
PDGFA-204ENST00000405692 CLTCQ00610 1675 aaKnown RBP31.75■■■□□ 2.67
PDGFA-204ENST00000405692 KDM5DQ9BY66 1539 aa31.73■■■□□ 2.67
PDGFA-204ENST00000405692 RNF17Q9BXT8 1623 aaKnown RBP31.72■■■□□ 2.67
PDGFA-204ENST00000405692 NPATQ14207 1427 aa31.69■■■□□ 2.66
PDGFA-204ENST00000405692 ITGAEP38570 1179 aa31.69■■■□□ 2.66
PDGFA-204ENST00000405692 ROCK1Q13464 1354 aa31.68■■■□□ 2.66
PDGFA-204ENST00000405692 PTPRKQ15262 1439 aa31.67■■■□□ 2.66
PDGFA-204ENST00000405692 LMTK3Q96Q04 1460 aa31.66■■■□□ 2.66
PDGFA-204ENST00000405692 SETD1BQ9UPS6 1966 aaKnown RBP31.65■■■□□ 2.66
PDGFA-204ENST00000405692 UHRF1BP1Q6BDS2 1440 aa31.65■■■□□ 2.66
PDGFA-204ENST00000405692 PREX1Q8TCU6 1659 aa31.64■■■□□ 2.65
PDGFA-204ENST00000405692 ANKRD50Q9ULJ7 1429 aa31.63■■■□□ 2.65
PDGFA-204ENST00000405692 KANK1Q14678 1352 aa31.62■■■□□ 2.65
PDGFA-204ENST00000405692 ZC3H13Q5T200 1668 aaKnown RBP31.62■■■□□ 2.65
PDGFA-204ENST00000405692 MROH1Q8NDA8 1641 aa31.59■■■□□ 2.65
PDGFA-204ENST00000405692 ABCC3O15438 1527 aa31.59■■■□□ 2.65
PDGFA-204ENST00000405692 PRDM15P57071 1507 aaPredicted RBP31.59■■■□□ 2.65
PDGFA-204ENST00000405692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.58■■■□□ 2.65
PDGFA-204ENST00000405692 PZPP20742 1482 aa31.58■■■□□ 2.65
PDGFA-204ENST00000405692 DEPDC5O75140 1603 aa31.56■■■□□ 2.64
PDGFA-204ENST00000405692 HSPA2P54652 639 aa31.51■■■□□ 2.63
PDGFA-204ENST00000405692 FBXO31Q5XUX0 539 aaPredicted RBP31.48■■■□□ 2.63
PDGFA-204ENST00000405692 CEP152O94986 1710 aa31.47■■■□□ 2.63
PDGFA-204ENST00000405692 TNRQ92752 1358 aa31.47■■■□□ 2.63
PDGFA-204ENST00000405692 CAMSAP1Q5T5Y3 1602 aa31.46■■■□□ 2.63
PDGFA-204ENST00000405692 ARHGAP31Q2M1Z3 1444 aa31.45■■■□□ 2.63
PDGFA-204ENST00000405692 LMTK2Q8IWU2 1503 aa31.44■■■□□ 2.62
PDGFA-204ENST00000405692 VWDEQ8N2E2 1590 aa31.44■■■□□ 2.62
PDGFA-204ENST00000405692 MYO3AQ8NEV4 1616 aa31.42■■■□□ 2.62
PDGFA-204ENST00000405692 UNC13BO14795 1591 aa31.39■■■□□ 2.61
PDGFA-204ENST00000405692 SPATA31D1Q6ZQQ2 1576 aa31.39■■■□□ 2.61
PDGFA-204ENST00000405692 ERVK-7P63135 1459 aa31.38■■■□□ 2.61
PDGFA-204ENST00000405692 CEP170BQ9Y4F5 1589 aaPredicted RBP31.38■■■□□ 2.61
PDGFA-204ENST00000405692 A2ML1A8K2U0 1454 aa31.37■■■□□ 2.61
PDGFA-204ENST00000405692 NLRP1Q9C000 1473 aa31.37■■■□□ 2.61
PDGFA-204ENST00000405692 ZNF142P52746 1687 aaPredicted RBP31.37■■■□□ 2.61
PDGFA-204ENST00000405692 NAIPQ13075 1403 aa31.34■■■□□ 2.61
PDGFA-204ENST00000405692 HFM1A2PYH4 1435 aa31.33■■■□□ 2.61
PDGFA-204ENST00000405692 DMRT2Q9Y5R5 561 aa31.33■■■□□ 2.61
PDGFA-204ENST00000405692 EFCAB6Q5THR3 1501 aa31.32■■■□□ 2.6
PDGFA-204ENST00000405692 NUP155O75694 1391 aa31.31■■■□□ 2.6
PDGFA-204ENST00000405692 GCC2Q8IWJ2 1684 aa31.3■■■□□ 2.6
PDGFA-204ENST00000405692 RPRD2Q5VT52 1461 aaKnown RBP31.29■■■□□ 2.6
PDGFA-204ENST00000405692 TET3O43151 1660 aa31.28■■■□□ 2.6
PDGFA-204ENST00000405692 THEMISQ8N1K5 641 aaPredicted RBP31.27■■■□□ 2.6
PDGFA-204ENST00000405692 IQGAP3Q86VI3 1631 aa31.26■■■□□ 2.59
PDGFA-204ENST00000405692 PLA2R1Q13018 1463 aa31.26■■■□□ 2.59
PDGFA-204ENST00000405692 UGGT1Q9NYU2 1555 aa31.24■■■□□ 2.59
PDGFA-204ENST00000405692 PKD2Q13563 968 aa31.23■■■□□ 2.59
PDGFA-204ENST00000405692 CFAP65Q6ZU64 1925 aaKnown RBP31.23■■■□□ 2.59
PDGFA-204ENST00000405692 STRCQ7RTU9 1775 aa31.2■■■□□ 2.59
PDGFA-204ENST00000405692 NOS1P29475 1434 aa31.2■■■□□ 2.59
PDGFA-204ENST00000405692 SLC52A1Q9NWF4 448 aa31.18■■■□□ 2.58
PDGFA-204ENST00000405692 PTPRTO14522 1441 aa31.17■■■□□ 2.58
PDGFA-204ENST00000405692 TRIM52Q96A61 297 aa31.16■■■□□ 2.58
PDGFA-204ENST00000405692 ACIN1Q9UKV3 1341 aaKnown RBP31.16■■■□□ 2.58
PDGFA-204ENST00000405692 STAG3Q9UJ98 1225 aa31.15■■■□□ 2.58
PDGFA-204ENST00000405692 ANKLE2Q86XL3 938 aa31.14■■■□□ 2.58
PDGFA-204ENST00000405692 NCKAP5LQ9HCH0 1330 aa31.14■■■□□ 2.58
PDGFA-204ENST00000405692 IDI1Q13907 227 aa31.12■■■□□ 2.57
PDGFA-204ENST00000405692 E9PCH4 1651 aa31.11■■■□□ 2.57
PDGFA-204ENST00000405692 SYNMO15061 1565 aa31.11■■■□□ 2.57
PDGFA-204ENST00000405692 UBR1Q8IWV7 1749 aa31.07■■■□□ 2.56
PDGFA-204ENST00000405692 SETD5Q9C0A6 1442 aa31.07■■■□□ 2.56
PDGFA-204ENST00000405692 PIK3C2BO00750 1634 aa31.06■■■□□ 2.56
PDGFA-204ENST00000405692 KDM5AP29375 1690 aaKnown RBP31.05■■■□□ 2.56
PDGFA-204ENST00000405692 SLC4A1APQ9BWU0 796 aaKnown RBP31.03■■■□□ 2.56
PDGFA-204ENST00000405692 POLR1AO95602 1720 aaPredicted RBP31.02■■■□□ 2.56
PDGFA-204ENST00000405692 EID1Q9Y6B2 187 aa31.02■■■□□ 2.56
PDGFA-204ENST00000405692 ADGRB3O60242 1522 aa30.99■■■□□ 2.55
PDGFA-204ENST00000405692 SLIT1O75093 1534 aa30.99■■■□□ 2.55
PDGFA-204ENST00000405692 ARHGAP23Q9P227 1491 aa30.98■■■□□ 2.55
PDGFA-204ENST00000405692 TMEM2Q9UHN6 1383 aa30.98■■■□□ 2.55
PDGFA-204ENST00000405692 MED14O60244 1454 aa30.97■■■□□ 2.55
PDGFA-204ENST00000405692 TXNDC2Q86VQ3 553 aa30.97■■■□□ 2.55
PDGFA-204ENST00000405692 SCAF11Q99590 1463 aaKnown RBP30.95■■■□□ 2.55
PDGFA-204ENST00000405692 NPHP4O75161 1426 aaPredicted RBP30.95■■■□□ 2.54
PDGFA-204ENST00000405692 NEURL4Q96JN8 1562 aa30.95■■■□□ 2.54
PDGFA-204ENST00000405692 HDGFP51858 240 aaKnown RBP30.94■■■□□ 2.54
PDGFA-204ENST00000405692 SPHKAPQ2M3C7 1700 aa30.93■■■□□ 2.54
PDGFA-204ENST00000405692 CHGAP10645 457 aaKnown RBP30.93■■■□□ 2.54
PDGFA-204ENST00000405692 RAB3GAP2Q9H2M9 1393 aa30.92■■■□□ 2.54
PDGFA-204ENST00000405692 LTKP29376 864 aa30.9■■■□□ 2.54
PDGFA-204ENST00000405692 MPHOSPH9Q99550 1183 aa30.89■■■□□ 2.54
PDGFA-204ENST00000405692 HRCP23327 699 aa30.88■■■□□ 2.53
PDGFA-204ENST00000405692 TRPM2O94759 1503 aa30.88■■■□□ 2.53
PDGFA-204ENST00000405692 TMEM131LA2VDJ0 1609 aa30.87■■■□□ 2.53
PDGFA-204ENST00000405692 IQGAP1P46940 1657 aa30.86■■■□□ 2.53
PDGFA-204ENST00000405692 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.85■■■□□ 2.53
PDGFA-204ENST00000405692 CERKQ8TCT0 537 aa30.85■■■□□ 2.53
PDGFA-204ENST00000405692 ZNF335Q9H4Z2 1342 aaPredicted RBP30.82■■■□□ 2.52
PDGFA-204ENST00000405692 RIMS2Q9UQ26 1411 aa30.81■■■□□ 2.52
PDGFA-204ENST00000405692 PPP1R15AO75807 674 aaPredicted RBP30.81■■■□□ 2.52
PDGFA-204ENST00000405692 LTBP4Q8N2S1 1624 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms