RNA–Protein interactions for RNA: ENST00000405531.7

C12orf40-202, Transcript of chromosome 12 open reading frame 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C12orf40, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-202ENST00000405531 PTPRKQ15262 1439 aa25.52■■□□□ 1.68
C12orf40-202ENST00000405531 MROH1Q8NDA8 1641 aa25.51■■□□□ 1.67
C12orf40-202ENST00000405531 ADGRL2O95490 1459 aa25.5■■□□□ 1.67
C12orf40-202ENST00000405531 PREX1Q8TCU6 1659 aa25.5■■□□□ 1.67
C12orf40-202ENST00000405531 KDM5DQ9BY66 1539 aa25.49■■□□□ 1.67
C12orf40-202ENST00000405531 NCOA1Q15788 1441 aa25.49■■□□□ 1.67
C12orf40-202ENST00000405531 ANKRD30AQ9BXX3 1397 aa25.49■■□□□ 1.67
C12orf40-202ENST00000405531 PPP6R1Q9UPN7 881 aa25.48■■□□□ 1.67
C12orf40-202ENST00000405531 ERBINQ96RT1 1412 aa25.48■■□□□ 1.67
C12orf40-202ENST00000405531 HSPA2P54652 639 aa25.47■■□□□ 1.67
C12orf40-202ENST00000405531 FAM135AQ9P2D6 1515 aa25.46■■□□□ 1.67
C12orf40-202ENST00000405531 NPATQ14207 1427 aa25.43■■□□□ 1.66
C12orf40-202ENST00000405531 UHRF1BP1Q6BDS2 1440 aa25.43■■□□□ 1.66
C12orf40-202ENST00000405531 RRBP1Q9P2E9 1410 aaKnown RBP25.43■■□□□ 1.66
C12orf40-202ENST00000405531 ABCC3O15438 1527 aa25.43■■□□□ 1.66
C12orf40-202ENST00000405531 WASHC2CQ9Y4E1 1318 aa25.42■■□□□ 1.66
C12orf40-202ENST00000405531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.42■■□□□ 1.66
C12orf40-202ENST00000405531 SETD1BQ9UPS6 1966 aaKnown RBP25.41■■□□□ 1.66
C12orf40-202ENST00000405531 PRDM15P57071 1507 aaPredicted RBP25.41■■□□□ 1.66
C12orf40-202ENST00000405531 ITGAEP38570 1179 aa25.4■■□□□ 1.66
C12orf40-202ENST00000405531 DEPDC5O75140 1603 aa25.39■■□□□ 1.66
C12orf40-202ENST00000405531 CEP152O94986 1710 aa25.39■■□□□ 1.65
C12orf40-202ENST00000405531 ZC3H13Q5T200 1668 aaKnown RBP25.38■■□□□ 1.65
C12orf40-202ENST00000405531 PZPP20742 1482 aa25.38■■□□□ 1.65
C12orf40-202ENST00000405531 MYO3AQ8NEV4 1616 aa25.36■■□□□ 1.65
C12orf40-202ENST00000405531 FBXO31Q5XUX0 539 aaPredicted RBP25.36■■□□□ 1.65
C12orf40-202ENST00000405531 ANKRD50Q9ULJ7 1429 aa25.35■■□□□ 1.65
C12orf40-202ENST00000405531 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
C12orf40-202ENST00000405531 ROCK1Q13464 1354 aa25.33■■□□□ 1.65
C12orf40-202ENST00000405531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.32■■□□□ 1.64
C12orf40-202ENST00000405531 VWDEQ8N2E2 1590 aa25.3■■□□□ 1.64
C12orf40-202ENST00000405531 ZNF142P52746 1687 aaPredicted RBP25.29■■□□□ 1.64
C12orf40-202ENST00000405531 CEP170BQ9Y4F5 1589 aaPredicted RBP25.29■■□□□ 1.64
C12orf40-202ENST00000405531 TNRQ92752 1358 aa25.28■■□□□ 1.64
C12orf40-202ENST00000405531 ERVK-7P63135 1459 aa25.25■■□□□ 1.63
C12orf40-202ENST00000405531 SPATA31D1Q6ZQQ2 1576 aa25.25■■□□□ 1.63
C12orf40-202ENST00000405531 STRCQ7RTU9 1775 aa25.24■■□□□ 1.63
C12orf40-202ENST00000405531 KANK1Q14678 1352 aa25.24■■□□□ 1.63
C12orf40-202ENST00000405531 LMTK2Q8IWU2 1503 aa25.24■■□□□ 1.63
C12orf40-202ENST00000405531 UNC13BO14795 1591 aa25.23■■□□□ 1.63
C12orf40-202ENST00000405531 A2ML1A8K2U0 1454 aa25.22■■□□□ 1.63
C12orf40-202ENST00000405531 ARHGAP31Q2M1Z3 1444 aa25.22■■□□□ 1.63
C12orf40-202ENST00000405531 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
C12orf40-202ENST00000405531 CFAP65Q6ZU64 1925 aaKnown RBP25.18■■□□□ 1.62
C12orf40-202ENST00000405531 NLRP1Q9C000 1473 aa25.16■■□□□ 1.62
C12orf40-202ENST00000405531 NAIPQ13075 1403 aa25.15■■□□□ 1.62
C12orf40-202ENST00000405531 GCC2Q8IWJ2 1684 aa25.14■■□□□ 1.61
C12orf40-202ENST00000405531 PLA2R1Q13018 1463 aa25.12■■□□□ 1.61
C12orf40-202ENST00000405531 TET3O43151 1660 aa25.12■■□□□ 1.61
C12orf40-202ENST00000405531 IQGAP3Q86VI3 1631 aa25.11■■□□□ 1.61
C12orf40-202ENST00000405531 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
C12orf40-202ENST00000405531 SYNMO15061 1565 aa25.1■■□□□ 1.61
C12orf40-202ENST00000405531 NCKAP5LQ9HCH0 1330 aa25.09■■□□□ 1.61
C12orf40-202ENST00000405531 HFM1A2PYH4 1435 aa25.08■■□□□ 1.61
C12orf40-202ENST00000405531 NUP155O75694 1391 aa25.08■■□□□ 1.61
C12orf40-202ENST00000405531 NOS1P29475 1434 aa25.08■■□□□ 1.6
C12orf40-202ENST00000405531 PTPRTO14522 1441 aa25.06■■□□□ 1.6
C12orf40-202ENST00000405531 RPRD2Q5VT52 1461 aaKnown RBP25.05■■□□□ 1.6
C12orf40-202ENST00000405531 E9PCH4 1651 aa25.05■■□□□ 1.6
C12orf40-202ENST00000405531 UBR1Q8IWV7 1749 aa25.05■■□□□ 1.6
C12orf40-202ENST00000405531 PIK3C2BO00750 1634 aa25.04■■□□□ 1.6
C12orf40-202ENST00000405531 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
C12orf40-202ENST00000405531 NEURL4Q96JN8 1562 aa25.02■■□□□ 1.6
C12orf40-202ENST00000405531 POLR1AO95602 1720 aaPredicted RBP25.01■■□□□ 1.59
C12orf40-202ENST00000405531 PKD2Q13563 968 aa25.01■■□□□ 1.59
C12orf40-202ENST00000405531 THEMISQ8N1K5 641 aaPredicted RBP25.01■■□□□ 1.59
C12orf40-202ENST00000405531 IDI1Q13907 227 aa24.97■■□□□ 1.59
C12orf40-202ENST00000405531 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
C12orf40-202ENST00000405531 ARHGAP23Q9P227 1491 aa24.93■■□□□ 1.58
C12orf40-202ENST00000405531 ANKLE2Q86XL3 938 aa24.93■■□□□ 1.58
C12orf40-202ENST00000405531 SLIT1O75093 1534 aa24.92■■□□□ 1.58
C12orf40-202ENST00000405531 KDM5AP29375 1690 aaKnown RBP24.91■■□□□ 1.58
C12orf40-202ENST00000405531 SLC52A1Q9NWF4 448 aa24.9■■□□□ 1.58
C12orf40-202ENST00000405531 MED14O60244 1454 aa24.9■■□□□ 1.58
C12orf40-202ENST00000405531 LTBP4Q8N2S1 1624 aa24.89■■□□□ 1.58
C12orf40-202ENST00000405531 NPHP4O75161 1426 aaPredicted RBP24.89■■□□□ 1.58
C12orf40-202ENST00000405531 TRIM52Q96A61 297 aa24.89■■□□□ 1.58
C12orf40-202ENST00000405531 STAG3Q9UJ98 1225 aa24.88■■□□□ 1.57
C12orf40-202ENST00000405531 TMEM2Q9UHN6 1383 aa24.88■■□□□ 1.57
C12orf40-202ENST00000405531 SCAF11Q99590 1463 aaKnown RBP24.88■■□□□ 1.57
C12orf40-202ENST00000405531 LTKP29376 864 aa24.88■■□□□ 1.57
C12orf40-202ENST00000405531 ZNF335Q9H4Z2 1342 aaPredicted RBP24.87■■□□□ 1.57
C12orf40-202ENST00000405531 IQGAP1P46940 1657 aa24.86■■□□□ 1.57
C12orf40-202ENST00000405531 SPHKAPQ2M3C7 1700 aa24.86■■□□□ 1.57
C12orf40-202ENST00000405531 TMEM131LA2VDJ0 1609 aa24.85■■□□□ 1.57
C12orf40-202ENST00000405531 MYO5BQ9ULV0 1848 aa24.85■■□□□ 1.57
C12orf40-202ENST00000405531 CERKQ8TCT0 537 aa24.84■■□□□ 1.57
C12orf40-202ENST00000405531 TXNDC2Q86VQ3 553 aa24.83■■□□□ 1.57
C12orf40-202ENST00000405531 SETD5Q9C0A6 1442 aa24.82■■□□□ 1.56
C12orf40-202ENST00000405531 ILDR1Q86SU0 546 aaPredicted RBP24.81■■□□□ 1.56
C12orf40-202ENST00000405531 SLC4A1APQ9BWU0 796 aaKnown RBP24.8■■□□□ 1.56
C12orf40-202ENST00000405531 TRPM2O94759 1503 aa24.79■■□□□ 1.56
C12orf40-202ENST00000405531 CHGAP10645 457 aaKnown RBP24.78■■□□□ 1.56
C12orf40-202ENST00000405531 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
C12orf40-202ENST00000405531 CLTCL1P53675 1640 aa24.78■■□□□ 1.56
C12orf40-202ENST00000405531 EID1Q9Y6B2 187 aa24.78■■□□□ 1.56
C12orf40-202ENST00000405531 RAB3GAP2Q9H2M9 1393 aa24.77■■□□□ 1.56
C12orf40-202ENST00000405531 FOXD1Q16676 465 aa24.75■■□□□ 1.55
C12orf40-202ENST00000405531 RIMS2Q9UQ26 1411 aa24.74■■□□□ 1.55
C12orf40-202ENST00000405531 FBXO41Q8TF61 875 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms