RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 KDM5DQ9BY66 1539 aa25.47■■□□□ 1.67
CGREF1-205ENST00000404694 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
CGREF1-205ENST00000404694 NPATQ14207 1427 aa25.46■■□□□ 1.67
CGREF1-205ENST00000404694 KIF15Q9NS87 1388 aa25.43■■□□□ 1.66
CGREF1-205ENST00000404694 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
CGREF1-205ENST00000404694 FAM50AQ14320 339 aaKnown RBP25.41■■□□□ 1.66
CGREF1-205ENST00000404694 MROH1Q8NDA8 1641 aa25.41■■□□□ 1.66
CGREF1-205ENST00000404694 ERBINQ96RT1 1412 aa25.39■■□□□ 1.65
CGREF1-205ENST00000404694 ZC3H13Q5T200 1668 aaKnown RBP25.38■■□□□ 1.65
CGREF1-205ENST00000404694 RRP7BPQ9NSQ0 103 aa25.38■■□□□ 1.65
CGREF1-205ENST00000404694 MYO3AQ8NEV4 1616 aa25.38■■□□□ 1.65
CGREF1-205ENST00000404694 PPARGC1BQ86YN6 1023 aaKnown RBP25.37■■□□□ 1.65
CGREF1-205ENST00000404694 ADGRL2O95490 1459 aa25.37■■□□□ 1.65
CGREF1-205ENST00000404694 WASHC2CQ9Y4E1 1318 aa25.37■■□□□ 1.65
CGREF1-205ENST00000404694 ANKRD30AQ9BXX3 1397 aa25.37■■□□□ 1.65
CGREF1-205ENST00000404694 CHIC2Q9UKJ5 165 aa25.36■■□□□ 1.65
CGREF1-205ENST00000404694 ABCC3O15438 1527 aa25.35■■□□□ 1.65
CGREF1-205ENST00000404694 ZNF142P52746 1687 aaPredicted RBP25.35■■□□□ 1.65
CGREF1-205ENST00000404694 NCOA1Q15788 1441 aa25.35■■□□□ 1.65
CGREF1-205ENST00000404694 PZPP20742 1482 aa25.34■■□□□ 1.65
CGREF1-205ENST00000404694 PRDM15P57071 1507 aaPredicted RBP25.34■■□□□ 1.65
CGREF1-205ENST00000404694 CEP152O94986 1710 aa25.32■■□□□ 1.64
CGREF1-205ENST00000404694 DEPDC5O75140 1603 aa25.32■■□□□ 1.64
CGREF1-205ENST00000404694 STRCQ7RTU9 1775 aa25.32■■□□□ 1.64
CGREF1-205ENST00000404694 CEP170BQ9Y4F5 1589 aaPredicted RBP25.3■■□□□ 1.64
CGREF1-205ENST00000404694 CAMSAP1Q5T5Y3 1602 aa25.28■■□□□ 1.64
CGREF1-205ENST00000404694 FBXO31Q5XUX0 539 aaPredicted RBP25.27■■□□□ 1.64
CGREF1-205ENST00000404694 TNRQ92752 1358 aa25.24■■□□□ 1.63
CGREF1-205ENST00000404694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.24■■□□□ 1.63
CGREF1-205ENST00000404694 A2ML1A8K2U0 1454 aa25.22■■□□□ 1.63
CGREF1-205ENST00000404694 SPATA31D1Q6ZQQ2 1576 aa25.21■■□□□ 1.63
CGREF1-205ENST00000404694 VWDEQ8N2E2 1590 aa25.2■■□□□ 1.62
CGREF1-205ENST00000404694 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
CGREF1-205ENST00000404694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.19■■□□□ 1.62
CGREF1-205ENST00000404694 RRBP1Q9P2E9 1410 aaKnown RBP25.19■■□□□ 1.62
CGREF1-205ENST00000404694 ROCK1Q13464 1354 aa25.18■■□□□ 1.62
CGREF1-205ENST00000404694 KANK1Q14678 1352 aa25.18■■□□□ 1.62
CGREF1-205ENST00000404694 ERVK-7P63135 1459 aa25.18■■□□□ 1.62
CGREF1-205ENST00000404694 PLA2R1Q13018 1463 aa25.18■■□□□ 1.62
CGREF1-205ENST00000404694 NLRP1Q9C000 1473 aa25.17■■□□□ 1.62
CGREF1-205ENST00000404694 LMTK2Q8IWU2 1503 aa25.17■■□□□ 1.62
CGREF1-205ENST00000404694 ARHGAP31Q2M1Z3 1444 aa25.16■■□□□ 1.62
CGREF1-205ENST00000404694 DMRT2Q9Y5R5 561 aa25.16■■□□□ 1.62
CGREF1-205ENST00000404694 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
CGREF1-205ENST00000404694 PTPRTO14522 1441 aa25.15■■□□□ 1.62
CGREF1-205ENST00000404694 ITGAEP38570 1179 aa25.14■■□□□ 1.61
CGREF1-205ENST00000404694 UNC13BO14795 1591 aa25.11■■□□□ 1.61
CGREF1-205ENST00000404694 EFCAB6Q5THR3 1501 aa25.1■■□□□ 1.61
CGREF1-205ENST00000404694 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
CGREF1-205ENST00000404694 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.61
CGREF1-205ENST00000404694 POLR1AO95602 1720 aaPredicted RBP25.07■■□□□ 1.6
CGREF1-205ENST00000404694 PKD2Q13563 968 aa25.05■■□□□ 1.6
CGREF1-205ENST00000404694 TET3O43151 1660 aa25.04■■□□□ 1.6
CGREF1-205ENST00000404694 UBR1Q8IWV7 1749 aa25.03■■□□□ 1.6
CGREF1-205ENST00000404694 ILDR1Q86SU0 546 aaPredicted RBP25.03■■□□□ 1.6
CGREF1-205ENST00000404694 NEURL4Q96JN8 1562 aa25.02■■□□□ 1.6
CGREF1-205ENST00000404694 THEMISQ8N1K5 641 aaPredicted RBP25.02■■□□□ 1.6
CGREF1-205ENST00000404694 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.6
CGREF1-205ENST00000404694 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
CGREF1-205ENST00000404694 SYNMO15061 1565 aa25■■□□□ 1.59
CGREF1-205ENST00000404694 RPRD2Q5VT52 1461 aaKnown RBP24.99■■□□□ 1.59
CGREF1-205ENST00000404694 PIK3C2BO00750 1634 aa24.98■■□□□ 1.59
CGREF1-205ENST00000404694 NOS1P29475 1434 aa24.98■■□□□ 1.59
CGREF1-205ENST00000404694 LTBP4Q8N2S1 1624 aa24.96■■□□□ 1.59
CGREF1-205ENST00000404694 CERKQ8TCT0 537 aa24.96■■□□□ 1.59
CGREF1-205ENST00000404694 ANKLE2Q86XL3 938 aa24.94■■□□□ 1.58
CGREF1-205ENST00000404694 E9PCH4 1651 aa24.94■■□□□ 1.58
CGREF1-205ENST00000404694 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
CGREF1-205ENST00000404694 FBXO41Q8TF61 875 aa24.93■■□□□ 1.58
CGREF1-205ENST00000404694 NAIPQ13075 1403 aa24.93■■□□□ 1.58
CGREF1-205ENST00000404694 MED14O60244 1454 aa24.92■■□□□ 1.58
CGREF1-205ENST00000404694 NUP155O75694 1391 aa24.92■■□□□ 1.58
CGREF1-205ENST00000404694 SLIT1O75093 1534 aa24.91■■□□□ 1.58
CGREF1-205ENST00000404694 ARHGAP23Q9P227 1491 aa24.9■■□□□ 1.58
CGREF1-205ENST00000404694 HFM1A2PYH4 1435 aa24.89■■□□□ 1.58
CGREF1-205ENST00000404694 NPHP4O75161 1426 aaPredicted RBP24.89■■□□□ 1.58
CGREF1-205ENST00000404694 IDI1Q13907 227 aa24.89■■□□□ 1.57
CGREF1-205ENST00000404694 IQGAP1P46940 1657 aa24.89■■□□□ 1.57
CGREF1-205ENST00000404694 ZNF335Q9H4Z2 1342 aaPredicted RBP24.89■■□□□ 1.57
CGREF1-205ENST00000404694 ADGRB3O60242 1522 aa24.88■■□□□ 1.57
CGREF1-205ENST00000404694 SCAF11Q99590 1463 aaKnown RBP24.86■■□□□ 1.57
CGREF1-205ENST00000404694 SLC52A1Q9NWF4 448 aa24.85■■□□□ 1.57
CGREF1-205ENST00000404694 STAG3Q9UJ98 1225 aa24.84■■□□□ 1.57
CGREF1-205ENST00000404694 TMEM2Q9UHN6 1383 aa24.83■■□□□ 1.57
CGREF1-205ENST00000404694 IQSEC2Q5JU85 1478 aa24.81■■□□□ 1.56
CGREF1-205ENST00000404694 MYO5BQ9ULV0 1848 aa24.81■■□□□ 1.56
CGREF1-205ENST00000404694 LTKP29376 864 aa24.8■■□□□ 1.56
CGREF1-205ENST00000404694 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
CGREF1-205ENST00000404694 TMEM131LA2VDJ0 1609 aa24.79■■□□□ 1.56
CGREF1-205ENST00000404694 TXNDC2Q86VQ3 553 aa24.79■■□□□ 1.56
CGREF1-205ENST00000404694 SPHKAPQ2M3C7 1700 aa24.78■■□□□ 1.56
CGREF1-205ENST00000404694 EID1Q9Y6B2 187 aa24.77■■□□□ 1.56
CGREF1-205ENST00000404694 CPS1P31327 1500 aa24.75■■□□□ 1.55
CGREF1-205ENST00000404694 STRCP1A6NGW2 1772 aa24.72■■□□□ 1.55
CGREF1-205ENST00000404694 ZFYVE9O95405 1425 aa24.71■■□□□ 1.55
CGREF1-205ENST00000404694 TRIM52Q96A61 297 aa24.69■■□□□ 1.54
CGREF1-205ENST00000404694 TRPM2O94759 1503 aa24.68■■□□□ 1.54
CGREF1-205ENST00000404694 RIMS2Q9UQ26 1411 aa24.67■■□□□ 1.54
CGREF1-205ENST00000404694 CHGAP10645 457 aaKnown RBP24.67■■□□□ 1.54
CGREF1-205ENST00000404694 CLTCL1P53675 1640 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms