RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
ATG4B-203ENST00000400772 CROCC2H7BZ55 1655 aa24.64■■□□□ 1.53
ATG4B-203ENST00000400772 FAM135AQ9P2D6 1515 aa24.64■■□□□ 1.53
ATG4B-203ENST00000400772 DNMT1P26358 1616 aaKnown RBP24.64■■□□□ 1.53
ATG4B-203ENST00000400772 FBXO31Q5XUX0 539 aaPredicted RBP24.63■■□□□ 1.53
ATG4B-203ENST00000400772 RRP7BPQ9NSQ0 103 aa24.63■■□□□ 1.53
ATG4B-203ENST00000400772 DUOX2Q9NRD8 1548 aa24.62■■□□□ 1.53
ATG4B-203ENST00000400772 RNF17Q9BXT8 1623 aaKnown RBP24.62■■□□□ 1.53
ATG4B-203ENST00000400772 KIF15Q9NS87 1388 aa24.61■■□□□ 1.53
ATG4B-203ENST00000400772 EIF2AK4Q9P2K8 1649 aaKnown RBP24.61■■□□□ 1.53
ATG4B-203ENST00000400772 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
ATG4B-203ENST00000400772 PZPP20742 1482 aa24.59■■□□□ 1.53
ATG4B-203ENST00000400772 CHIC2Q9UKJ5 165 aa24.59■■□□□ 1.53
ATG4B-203ENST00000400772 MYO3AQ8NEV4 1616 aa24.59■■□□□ 1.53
ATG4B-203ENST00000400772 NCOA1Q15788 1441 aa24.59■■□□□ 1.53
ATG4B-203ENST00000400772 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
ATG4B-203ENST00000400772 FAM50AQ14320 339 aaKnown RBP24.57■■□□□ 1.52
ATG4B-203ENST00000400772 CAMSAP1Q5T5Y3 1602 aa24.57■■□□□ 1.52
ATG4B-203ENST00000400772 ABCC3O15438 1527 aa24.56■■□□□ 1.52
ATG4B-203ENST00000400772 CEP170BQ9Y4F5 1589 aaPredicted RBP24.55■■□□□ 1.52
ATG4B-203ENST00000400772 PTPRTO14522 1441 aa24.55■■□□□ 1.52
ATG4B-203ENST00000400772 ERBINQ96RT1 1412 aa24.55■■□□□ 1.52
ATG4B-203ENST00000400772 ZNF142P52746 1687 aaPredicted RBP24.55■■□□□ 1.52
ATG4B-203ENST00000400772 TNRQ92752 1358 aa24.54■■□□□ 1.52
ATG4B-203ENST00000400772 ANKRD30AQ9BXX3 1397 aa24.54■■□□□ 1.52
ATG4B-203ENST00000400772 A2ML1A8K2U0 1454 aa24.52■■□□□ 1.52
ATG4B-203ENST00000400772 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
ATG4B-203ENST00000400772 FBXO41Q8TF61 875 aa24.52■■□□□ 1.52
ATG4B-203ENST00000400772 NCKAP5LQ9HCH0 1330 aa24.52■■□□□ 1.52
ATG4B-203ENST00000400772 ZC3H13Q5T200 1668 aaKnown RBP24.5■■□□□ 1.51
ATG4B-203ENST00000400772 CERKQ8TCT0 537 aa24.49■■□□□ 1.51
ATG4B-203ENST00000400772 ADGRL2O95490 1459 aa24.49■■□□□ 1.51
ATG4B-203ENST00000400772 PLA2R1Q13018 1463 aa24.49■■□□□ 1.51
ATG4B-203ENST00000400772 PRDM15P57071 1507 aaPredicted RBP24.47■■□□□ 1.51
ATG4B-203ENST00000400772 PKD2Q13563 968 aa24.46■■□□□ 1.51
ATG4B-203ENST00000400772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.511e-13■□□□□ 11.2
ATG4B-203ENST00000400772 CEP152O94986 1710 aa24.46■■□□□ 1.51
ATG4B-203ENST00000400772 SPATA31D1Q6ZQQ2 1576 aa24.44■■□□□ 1.5
ATG4B-203ENST00000400772 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
ATG4B-203ENST00000400772 ERVK-7P63135 1459 aa24.43■■□□□ 1.5
ATG4B-203ENST00000400772 NLRP1Q9C000 1473 aa24.42■■□□□ 1.5
ATG4B-203ENST00000400772 ARHGAP31Q2M1Z3 1444 aa24.41■■□□□ 1.5
ATG4B-203ENST00000400772 VWDEQ8N2E2 1590 aa24.37■■□□□ 1.49
ATG4B-203ENST00000400772 CFAP65Q6ZU64 1925 aaKnown RBP24.37■■□□□ 1.49
ATG4B-203ENST00000400772 ANKRD50Q9ULJ7 1429 aa24.37■■□□□ 1.49
ATG4B-203ENST00000400772 LTBP4Q8N2S1 1624 aa24.37■■□□□ 1.49
ATG4B-203ENST00000400772 THEMISQ8N1K5 641 aaPredicted RBP24.37■■□□□ 1.49
ATG4B-203ENST00000400772 KANK1Q14678 1352 aa24.37■■□□□ 1.49
ATG4B-203ENST00000400772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.37■■□□□ 1.494e-7■□□□□ 8.1
ATG4B-203ENST00000400772 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
ATG4B-203ENST00000400772 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
ATG4B-203ENST00000400772 ROCK1Q13464 1354 aa24.33■■□□□ 1.49
ATG4B-203ENST00000400772 ANKLE2Q86XL3 938 aa24.32■■□□□ 1.48
ATG4B-203ENST00000400772 ZNF335Q9H4Z2 1342 aaPredicted RBP24.32■■□□□ 1.48
ATG4B-203ENST00000400772 ITGAEP38570 1179 aa24.31■■□□□ 1.48
ATG4B-203ENST00000400772 NEURL4Q96JN8 1562 aa24.31■■□□□ 1.48
ATG4B-203ENST00000400772 POLR1AO95602 1720 aaPredicted RBP24.27■■□□□ 1.48
ATG4B-203ENST00000400772 RRBP1Q9P2E9 1410 aaKnown RBP24.26■■□□□ 1.47
ATG4B-203ENST00000400772 MED14O60244 1454 aa24.25■■□□□ 1.47
ATG4B-203ENST00000400772 EFCAB6Q5THR3 1501 aa24.25■■□□□ 1.47
ATG4B-203ENST00000400772 UBR1Q8IWV7 1749 aa24.24■■□□□ 1.47
ATG4B-203ENST00000400772 IDI1Q13907 227 aa24.23■■□□□ 1.47
ATG4B-203ENST00000400772 NOS1P29475 1434 aa24.23■■□□□ 1.47
ATG4B-203ENST00000400772 NPHP4O75161 1426 aaPredicted RBP24.22■■□□□ 1.47
ATG4B-203ENST00000400772 UNC13BO14795 1591 aa24.2■■□□□ 1.47
ATG4B-203ENST00000400772 SYNMO15061 1565 aa24.2■■□□□ 1.47
ATG4B-203ENST00000400772 IQSEC2Q5JU85 1478 aa24.19■■□□□ 1.46
ATG4B-203ENST00000400772 LTKP29376 864 aa24.19■■□□□ 1.46
ATG4B-203ENST00000400772 PIK3C2BO00750 1634 aa24.19■■□□□ 1.46
ATG4B-203ENST00000400772 ARHGAP23Q9P227 1491 aa24.19■■□□□ 1.46
ATG4B-203ENST00000400772 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
ATG4B-203ENST00000400772 SLIT1O75093 1534 aa24.17■■□□□ 1.46
ATG4B-203ENST00000400772 TET3O43151 1660 aa24.16■■□□□ 1.46
ATG4B-203ENST00000400772 TXNDC2Q86VQ3 553 aa24.16■■□□□ 1.46
ATG4B-203ENST00000400772 SLC52A1Q9NWF4 448 aa24.15■■□□□ 1.46
ATG4B-203ENST00000400772 IQGAP1P46940 1657 aa24.15■■□□□ 1.46
ATG4B-203ENST00000400772 SCAF11Q99590 1463 aaKnown RBP24.14■■□□□ 1.46
ATG4B-203ENST00000400772 STAG3Q9UJ98 1225 aa24.14■■□□□ 1.45
ATG4B-203ENST00000400772 TMEM2Q9UHN6 1383 aa24.14■■□□□ 1.45
ATG4B-203ENST00000400772 NUP155O75694 1391 aa24.13■■□□□ 1.45
ATG4B-203ENST00000400772 IQGAP3Q86VI3 1631 aa24.11■■□□□ 1.45
ATG4B-203ENST00000400772 GCC2Q8IWJ2 1684 aa24.11■■□□□ 1.45
ATG4B-203ENST00000400772 EID1Q9Y6B2 187 aa24.1■■□□□ 1.45
ATG4B-203ENST00000400772 KDM5AP29375 1690 aaKnown RBP24.1■■□□□ 1.45
ATG4B-203ENST00000400772 CPS1P31327 1500 aa24.08■■□□□ 1.45
ATG4B-203ENST00000400772 E9PCH4 1651 aa24.08■■□□□ 1.44
ATG4B-203ENST00000400772 ADGRB3O60242 1522 aa24.07■■□□□ 1.44
ATG4B-203ENST00000400772 NAIPQ13075 1403 aa24.07■■□□□ 1.44
ATG4B-203ENST00000400772 STRCP1A6NGW2 1772 aa24.03■■□□□ 1.44
ATG4B-203ENST00000400772 UBAP1LF5GYI3 381 aa24.03■■□□□ 1.44
ATG4B-203ENST00000400772 TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
ATG4B-203ENST00000400772 HFM1A2PYH4 1435 aa23.99■■□□□ 1.43
ATG4B-203ENST00000400772 ZFYVE9O95405 1425 aa23.98■■□□□ 1.43
ATG4B-203ENST00000400772 MYO5BQ9ULV0 1848 aa23.98■■□□□ 1.43
ATG4B-203ENST00000400772 LRRC7Q96NW7 1537 aa23.97■■□□□ 1.43
ATG4B-203ENST00000400772 CHGAP10645 457 aaKnown RBP23.96■■□□□ 1.43
ATG4B-203ENST00000400772 SLC26A8Q96RN1 970 aa23.95■■□□□ 1.42
ATG4B-203ENST00000400772 RIMS2Q9UQ26 1411 aa23.94■■□□□ 1.42
ATG4B-203ENST00000400772 TOM1O60784 492 aa23.92■■□□□ 1.42
ATG4B-203ENST00000400772 HDGFP51858 240 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms