RNA–Protein interactions for RNA: ENST00000400432.4

LINC00598-203, long intergenic non-protein coding RNA 598, humanhuman

TSL 5

Gene LINC00598, Length 1,297 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-203ENST00000400432 ADGBQ8N7X0 1667 aa17.15■□□□□ 0.34
LINC00598-203ENST00000400432 SPAG9O60271 1321 aaKnown RBP17.15■□□□□ 0.34
LINC00598-203ENST00000400432 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
LINC00598-203ENST00000400432 GGT6Q6P531 493 aa17.14■□□□□ 0.33
LINC00598-203ENST00000400432 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
LINC00598-203ENST00000400432 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
LINC00598-203ENST00000400432 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
LINC00598-203ENST00000400432 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
LINC00598-203ENST00000400432 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
LINC00598-203ENST00000400432 HNRNPMP52272 730 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC00598-203ENST00000400432 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.32
LINC00598-203ENST00000400432 SYNMO15061 1565 aa17.08■□□□□ 0.32
LINC00598-203ENST00000400432 CCDC18Q5T9S5 1454 aa17.07■□□□□ 0.32
LINC00598-203ENST00000400432 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
LINC00598-203ENST00000400432 NPHP4O75161 1426 aaPredicted RBP17.06■□□□□ 0.32
LINC00598-203ENST00000400432 TNRQ92752 1358 aa17.06■□□□□ 0.32
LINC00598-203ENST00000400432 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC00598-203ENST00000400432 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
LINC00598-203ENST00000400432 MED14O60244 1454 aa17.05■□□□□ 0.32
LINC00598-203ENST00000400432 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
LINC00598-203ENST00000400432 ANKLE2Q86XL3 938 aa17.05■□□□□ 0.32
LINC00598-203ENST00000400432 GPATCH8Q9UKJ3 1502 aaKnown RBP17.05■□□□□ 0.32
LINC00598-203ENST00000400432 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
LINC00598-203ENST00000400432 UBTFP17480 764 aaKnown RBP17.04■□□□□ 0.32
LINC00598-203ENST00000400432 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
LINC00598-203ENST00000400432 PZPP20742 1482 aa17.02■□□□□ 0.32
LINC00598-203ENST00000400432 POTEAQ6S8J7 498 aa17.02■□□□□ 0.32
LINC00598-203ENST00000400432 KIAA1107Q9UPP5 1409 aa17.02■□□□□ 0.31
LINC00598-203ENST00000400432 UGGT1Q9NYU2 1555 aa17.02■□□□□ 0.31
LINC00598-203ENST00000400432 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
LINC00598-203ENST00000400432 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
LINC00598-203ENST00000400432 ZC3H13Q5T200 1668 aaKnown RBP17■□□□□ 0.31
LINC00598-203ENST00000400432 THEMISQ8N1K5 641 aaPredicted RBP16.99■□□□□ 0.31
LINC00598-203ENST00000400432 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
LINC00598-203ENST00000400432 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
LINC00598-203ENST00000400432 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
LINC00598-203ENST00000400432 MIA2Q96PC5 1412 aa16.96■□□□□ 0.3
LINC00598-203ENST00000400432 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
LINC00598-203ENST00000400432 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
LINC00598-203ENST00000400432 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
LINC00598-203ENST00000400432 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
LINC00598-203ENST00000400432 KIF3BO15066 747 aa16.91■□□□□ 0.3
LINC00598-203ENST00000400432 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
LINC00598-203ENST00000400432 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
LINC00598-203ENST00000400432 RTEL1-TNFRSF6BF6WH68 1400 aa16.9■□□□□ 0.3
LINC00598-203ENST00000400432 UBR1Q8IWV7 1749 aa16.9■□□□□ 0.3
LINC00598-203ENST00000400432 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
LINC00598-203ENST00000400432 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
LINC00598-203ENST00000400432 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
LINC00598-203ENST00000400432 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
LINC00598-203ENST00000400432 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
LINC00598-203ENST00000400432 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
LINC00598-203ENST00000400432 KCNA4P22459 653 aa16.86■□□□□ 0.29
LINC00598-203ENST00000400432 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
LINC00598-203ENST00000400432 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
LINC00598-203ENST00000400432 CEP152O94986 1710 aa16.81■□□□□ 0.28
LINC00598-203ENST00000400432 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00598-203ENST00000400432 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
LINC00598-203ENST00000400432 ABCC3O15438 1527 aa16.79■□□□□ 0.28
LINC00598-203ENST00000400432 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
LINC00598-203ENST00000400432 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
LINC00598-203ENST00000400432 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
LINC00598-203ENST00000400432 SLIT1O75093 1534 aa16.77■□□□□ 0.28
LINC00598-203ENST00000400432 LTKP29376 864 aa16.77■□□□□ 0.28
LINC00598-203ENST00000400432 ARHGAP23Q9P227 1491 aa16.77■□□□□ 0.28
LINC00598-203ENST00000400432 MAP3K1Q13233 1512 aa16.76■□□□□ 0.27
LINC00598-203ENST00000400432 TMEM94Q12767 1356 aa16.76■□□□□ 0.27
LINC00598-203ENST00000400432 LRRC9Q6ZRR7 1453 aa16.74■□□□□ 0.27
LINC00598-203ENST00000400432 TXNDC2Q86VQ3 553 aa16.74■□□□□ 0.27
LINC00598-203ENST00000400432 EHBP1L1Q8N3D4 1523 aa16.73■□□□□ 0.27
LINC00598-203ENST00000400432 MROH1Q8NDA8 1641 aa16.73■□□□□ 0.27
LINC00598-203ENST00000400432 CAMSAP2Q08AD1 1489 aa16.73■□□□□ 0.27
LINC00598-203ENST00000400432 JCADQ9P266 1359 aa16.72■□□□□ 0.27
LINC00598-203ENST00000400432 PIK3C2BO00750 1634 aa16.71■□□□□ 0.27
LINC00598-203ENST00000400432 COL16A1Q07092 1604 aaPredicted RBP16.71■□□□□ 0.27
LINC00598-203ENST00000400432 EIF2AK4Q9P2K8 1649 aaKnown RBP16.71■□□□□ 0.27
LINC00598-203ENST00000400432 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
LINC00598-203ENST00000400432 LRP6O75581 1613 aa16.7■□□□□ 0.26
LINC00598-203ENST00000400432 ARHGEF5Q12774 1597 aa16.69■□□□□ 0.26
LINC00598-203ENST00000400432 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
LINC00598-203ENST00000400432 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
LINC00598-203ENST00000400432 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
LINC00598-203ENST00000400432 PROSER2Q86WR7 435 aaPredicted RBP16.67■□□□□ 0.26
LINC00598-203ENST00000400432 EID1Q9Y6B2 187 aa16.67■□□□□ 0.26
LINC00598-203ENST00000400432 KCNA6P17658 529 aa16.66■□□□□ 0.26
LINC00598-203ENST00000400432 NWD1Q149M9 1564 aa16.66■□□□□ 0.26
LINC00598-203ENST00000400432 RSPH4AQ5TD94 716 aa16.66■□□□□ 0.26
LINC00598-203ENST00000400432 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
LINC00598-203ENST00000400432 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
LINC00598-203ENST00000400432 TET3O43151 1660 aa16.65■□□□□ 0.26
LINC00598-203ENST00000400432 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
LINC00598-203ENST00000400432 NKTRP30414 1462 aaKnown RBP16.64■□□□□ 0.25
LINC00598-203ENST00000400432 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
LINC00598-203ENST00000400432 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
LINC00598-203ENST00000400432 MEX3CQ5U5Q3 659 aaKnown RBP16.63■□□□□ 0.25
LINC00598-203ENST00000400432 SLAIN2Q9P270 581 aa16.63■□□□□ 0.25
LINC00598-203ENST00000400432 MSH6P52701 1360 aa16.63■□□□□ 0.25
LINC00598-203ENST00000400432 CHD2O14647 1828 aaKnown RBP16.62■□□□□ 0.25
LINC00598-203ENST00000400432 TSPY4P0CV99 314 aa16.62■□□□□ 0.25
LINC00598-203ENST00000400432 TSPY10P0CW01 314 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms