RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 FBXO31Q5XUX0 539 aaPredicted RBP29.58■■■□□ 2.33
COL4A2-202ENST00000400163 TNRQ92752 1358 aa29.56■■■□□ 2.32
COL4A2-202ENST00000400163 POLR1AO95602 1720 aaPredicted RBP29.53■■■□□ 2.32
COL4A2-202ENST00000400163 CCDC141Q6ZP82 1450 aa29.53■■■□□ 2.32
COL4A2-202ENST00000400163 PZPP20742 1482 aa29.52■■■□□ 2.32
COL4A2-202ENST00000400163 NEURL4Q96JN8 1562 aa29.51■■■□□ 2.31
COL4A2-202ENST00000400163 KDM5DQ9BY66 1539 aa29.5■■■□□ 2.31
COL4A2-202ENST00000400163 RSPH4AQ5TD94 716 aa29.5■■■□□ 2.31
COL4A2-202ENST00000400163 WASHC2CQ9Y4E1 1318 aa29.49■■■□□ 2.31
COL4A2-202ENST00000400163 FAM135AQ9P2D6 1515 aa29.49■■■□□ 2.31
COL4A2-202ENST00000400163 CAMSAP2Q08AD1 1489 aa29.48■■■□□ 2.31
COL4A2-202ENST00000400163 NCOA2Q15596 1464 aa29.48■■■□□ 2.31
COL4A2-202ENST00000400163 CPS1P31327 1500 aa29.47■■■□□ 2.31
COL4A2-202ENST00000400163 SHANK2Q9UPX8 1470 aa29.46■■■□□ 2.31
COL4A2-202ENST00000400163 SCAF1Q9H7N4 1312 aaKnown RBP29.45■■■□□ 2.31
COL4A2-202ENST00000400163 ANKLE2Q86XL3 938 aa29.45■■■□□ 2.31
COL4A2-202ENST00000400163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.44■■■□□ 2.3
COL4A2-202ENST00000400163 HSPA1LP34931 641 aa29.44■■■□□ 2.3
COL4A2-202ENST00000400163 PIP4K2BP78356 416 aa29.44■■■□□ 2.3
COL4A2-202ENST00000400163 MIA2Q96PC5 1412 aa29.44■■■□□ 2.3
COL4A2-202ENST00000400163 TOM1O60784 492 aa29.43■■■□□ 2.3
COL4A2-202ENST00000400163 THEMISQ8N1K5 641 aaPredicted RBP29.43■■■□□ 2.3
COL4A2-202ENST00000400163 NLRP1Q9C000 1473 aa29.4■■■□□ 2.3
COL4A2-202ENST00000400163 TSPY4P0CV99 314 aa29.39■■■□□ 2.3
COL4A2-202ENST00000400163 TSPY10P0CW01 314 aa29.39■■■□□ 2.3
COL4A2-202ENST00000400163 ARHGEF5Q12774 1597 aa29.39■■■□□ 2.29
COL4A2-202ENST00000400163 VWDEQ8N2E2 1590 aa29.38■■■□□ 2.29
COL4A2-202ENST00000400163 UGGT1Q9NYU2 1555 aa29.38■■■□□ 2.29
COL4A2-202ENST00000400163 NPHP4O75161 1426 aaPredicted RBP29.36■■■□□ 2.29
COL4A2-202ENST00000400163 MED14O60244 1454 aa29.36■■■□□ 2.29
COL4A2-202ENST00000400163 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
COL4A2-202ENST00000400163 MED1Q15648 1581 aaPredicted RBP29.33■■■□□ 2.29
COL4A2-202ENST00000400163 RNF17Q9BXT8 1623 aaKnown RBP29.29■■■□□ 2.28
COL4A2-202ENST00000400163 IQGAP1P46940 1657 aa29.28■■■□□ 2.28
COL4A2-202ENST00000400163 ABCC3O15438 1527 aa29.28■■■□□ 2.28
COL4A2-202ENST00000400163 ALKQ9UM73 1620 aa29.26■■■□□ 2.27
COL4A2-202ENST00000400163 MAST1Q9Y2H9 1570 aa29.26■■■□□ 2.27
COL4A2-202ENST00000400163 ZC3H13Q5T200 1668 aaKnown RBP29.25■■■□□ 2.27
COL4A2-202ENST00000400163 LRRC9Q6ZRR7 1453 aa29.23■■■□□ 2.27
COL4A2-202ENST00000400163 STRCP1A6NGW2 1772 aa29.23■■■□□ 2.27
COL4A2-202ENST00000400163 CFAP65Q6ZU64 1925 aaKnown RBP29.22■■■□□ 2.27
COL4A2-202ENST00000400163 ERVK-7P63135 1459 aa29.22■■■□□ 2.27
COL4A2-202ENST00000400163 EIF2AK4Q9P2K8 1649 aaKnown RBP29.21■■■□□ 2.27
COL4A2-202ENST00000400163 LRRC7Q96NW7 1537 aa29.2■■■□□ 2.26
COL4A2-202ENST00000400163 MROH1Q8NDA8 1641 aa29.18■■■□□ 2.26
COL4A2-202ENST00000400163 VPS8Q8N3P4 1428 aa29.16■■■□□ 2.26
COL4A2-202ENST00000400163 CEP152O94986 1710 aa29.16■■■□□ 2.26
COL4A2-202ENST00000400163 UBR1Q8IWV7 1749 aa29.14■■■□□ 2.26
COL4A2-202ENST00000400163 KANK4Q5T7N3 995 aaPredicted RBP29.14■■■□□ 2.26
COL4A2-202ENST00000400163 PHF23Q9BUL5 403 aaPredicted RBP29.14■■■□□ 2.26
COL4A2-202ENST00000400163 SYNMO15061 1565 aa29.13■■■□□ 2.25
COL4A2-202ENST00000400163 SENP3Q9H4L4 574 aaPredicted RBP29.12■■■□□ 2.25
COL4A2-202ENST00000400163 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
COL4A2-202ENST00000400163 DUOX2Q9NRD8 1548 aa29.1■■■□□ 2.25
COL4A2-202ENST00000400163 SCAF11Q99590 1463 aaKnown RBP29.1■■■□□ 2.25
COL4A2-202ENST00000400163 LTKP29376 864 aa29.08■■■□□ 2.25
COL4A2-202ENST00000400163 MAP3K1Q13233 1512 aa29.07■■■□□ 2.24
COL4A2-202ENST00000400163 TXNDC2Q86VQ3 553 aa29.07■■■□□ 2.24
COL4A2-202ENST00000400163 ARHGAP23Q9P227 1491 aa29.05■■■□□ 2.24
COL4A2-202ENST00000400163 SLIT1O75093 1534 aa29.04■■■□□ 2.24
COL4A2-202ENST00000400163 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
COL4A2-202ENST00000400163 LOC105371045A0A1W2PR82 267 aa29.03■■■□□ 2.24
COL4A2-202ENST00000400163 KIF15Q9NS87 1388 aa29.01■■■□□ 2.24
COL4A2-202ENST00000400163 PRDM15P57071 1507 aaPredicted RBP29.01■■■□□ 2.23
COL4A2-202ENST00000400163 XIRP1Q702N8 1843 aaKnown RBP28.99■■■□□ 2.23
COL4A2-202ENST00000400163 RRP7BPQ9NSQ0 103 aa28.99■■■□□ 2.23
COL4A2-202ENST00000400163 EID1Q9Y6B2 187 aa28.99■■■□□ 2.23
COL4A2-202ENST00000400163 ERBINQ96RT1 1412 aa28.98■■■□□ 2.23
COL4A2-202ENST00000400163 ABCC5O15440 1437 aa28.97■■■□□ 2.23
COL4A2-202ENST00000400163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.97■■■□□ 2.23
COL4A2-202ENST00000400163 PIK3C2BO00750 1634 aa28.96■■■□□ 2.23
COL4A2-202ENST00000400163 CROCC2H7BZ55 1655 aa28.96■■■□□ 2.23
COL4A2-202ENST00000400163 TMEM2Q9UHN6 1383 aa28.93■■■□□ 2.22
COL4A2-202ENST00000400163 STAG3Q9UJ98 1225 aa28.92■■■□□ 2.22
COL4A2-202ENST00000400163 PTPN23Q9H3S7 1636 aa28.91■■■□□ 2.22
COL4A2-202ENST00000400163 KANK1Q14678 1352 aa28.89■■■□□ 2.22
COL4A2-202ENST00000400163 RGS17Q9UGC6 210 aaPredicted RBP28.89■■■□□ 2.22
COL4A2-202ENST00000400163 DAPK1P53355 1430 aa28.87■■■□□ 2.21
COL4A2-202ENST00000400163 IDI1Q13907 227 aa28.87■■■□□ 2.21
COL4A2-202ENST00000400163 EFCAB6Q5THR3 1501 aa28.86■■■□□ 2.21
COL4A2-202ENST00000400163 KDM5AP29375 1690 aaKnown RBP28.86■■■□□ 2.21
COL4A2-202ENST00000400163 FAM135BQ49AJ0 1406 aa28.86■■■□□ 2.21
COL4A2-202ENST00000400163 TMEM94Q12767 1356 aa28.85■■■□□ 2.21
COL4A2-202ENST00000400163 KCNA6P17658 529 aa28.83■■■□□ 2.21
COL4A2-202ENST00000400163 LMTK2Q8IWU2 1503 aa28.83■■■□□ 2.21
COL4A2-202ENST00000400163 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
COL4A2-202ENST00000400163 CHIC2Q9UKJ5 165 aa28.81■■■□□ 2.2
COL4A2-202ENST00000400163 TET3O43151 1660 aa28.8■■■□□ 2.2
COL4A2-202ENST00000400163 ANKRD30AQ9BXX3 1397 aa28.8■■■□□ 2.2
COL4A2-202ENST00000400163 APLP2Q06481 763 aa28.8■■■□□ 2.2
COL4A2-202ENST00000400163 FGD6Q6ZV73 1430 aa28.79■■■□□ 2.2
COL4A2-202ENST00000400163 PROSER2Q86WR7 435 aaPredicted RBP28.79■■■□□ 2.2
COL4A2-202ENST00000400163 RBM33Q96EV2 1170 aaKnown RBP28.77■■■□□ 2.2
COL4A2-202ENST00000400163 NOS1P29475 1434 aa28.77■■■□□ 2.2
COL4A2-202ENST00000400163 ROBO1Q9Y6N7 1651 aa28.74■■■□□ 2.19
COL4A2-202ENST00000400163 ADGRB3O60242 1522 aa28.73■■■□□ 2.19
COL4A2-202ENST00000400163 SLC52A1Q9NWF4 448 aa28.71■■■□□ 2.19
COL4A2-202ENST00000400163 POTEAQ6S8J7 498 aa28.7■■■□□ 2.18
COL4A2-202ENST00000400163 BCANQ96GW7 911 aa28.7■■■□□ 2.18
COL4A2-202ENST00000400163 NKTRP30414 1462 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms