RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 DUOX2Q9NRD8 1548 aa13.05□□□□□ -0.32
USP16-202ENST00000399973 ABCC5O15440 1437 aa13.05□□□□□ -0.32
USP16-202ENST00000399973 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
USP16-202ENST00000399973 SETD1BQ9UPS6 1966 aaKnown RBP13.04□□□□□ -0.32
USP16-202ENST00000399973 KIF3BO15066 747 aa13.04□□□□□ -0.32
USP16-202ENST00000399973 HSPA2P54652 639 aa13.04□□□□□ -0.32
USP16-202ENST00000399973 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
USP16-202ENST00000399973 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
USP16-202ENST00000399973 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
USP16-202ENST00000399973 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
USP16-202ENST00000399973 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.32
USP16-202ENST00000399973 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
USP16-202ENST00000399973 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
USP16-202ENST00000399973 ZMYM3Q14202 1370 aa13.01□□□□□ -0.33
USP16-202ENST00000399973 NPATQ14207 1427 aa13.01□□□□□ -0.33
USP16-202ENST00000399973 DEPDC5O75140 1603 aa13□□□□□ -0.33
USP16-202ENST00000399973 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
USP16-202ENST00000399973 ABCC3O15438 1527 aa12.99□□□□□ -0.33
USP16-202ENST00000399973 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
USP16-202ENST00000399973 ERBINQ96RT1 1412 aa12.99□□□□□ -0.33
USP16-202ENST00000399973 STRCQ7RTU9 1775 aa12.99□□□□□ -0.33
USP16-202ENST00000399973 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
USP16-202ENST00000399973 CHIC2Q9UKJ5 165 aa12.98□□□□□ -0.33
USP16-202ENST00000399973 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
USP16-202ENST00000399973 ANKRD30AQ9BXX3 1397 aa12.97□□□□□ -0.33
USP16-202ENST00000399973 ADRA2BP18089 450 aa12.97□□□□□ -0.33
USP16-202ENST00000399973 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
USP16-202ENST00000399973 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
USP16-202ENST00000399973 PZPP20742 1482 aa12.97□□□□□ -0.33
USP16-202ENST00000399973 WASHC2CQ9Y4E1 1318 aa12.96□□□□□ -0.33
USP16-202ENST00000399973 POLR1AO95602 1720 aaPredicted RBP12.94□□□□□ -0.34
USP16-202ENST00000399973 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
USP16-202ENST00000399973 TNRQ92752 1358 aa12.93□□□□□ -0.34
USP16-202ENST00000399973 ITGAEP38570 1179 aa12.92□□□□□ -0.34
USP16-202ENST00000399973 SPATA31D1Q6ZQQ2 1576 aa12.91□□□□□ -0.34
USP16-202ENST00000399973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.343e-8■□□□□ 10.7
USP16-202ENST00000399973 KANK1Q14678 1352 aa12.91□□□□□ -0.34
USP16-202ENST00000399973 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
USP16-202ENST00000399973 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
USP16-202ENST00000399973 UNC13BO14795 1591 aa12.9□□□□□ -0.34
USP16-202ENST00000399973 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
USP16-202ENST00000399973 GCC2Q8IWJ2 1684 aa12.89□□□□□ -0.35
USP16-202ENST00000399973 ANKRD50Q9ULJ7 1429 aa12.88□□□□□ -0.35
USP16-202ENST00000399973 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
USP16-202ENST00000399973 VWDEQ8N2E2 1590 aa12.88□□□□□ -0.35
USP16-202ENST00000399973 UBR1Q8IWV7 1749 aa12.88□□□□□ -0.35
USP16-202ENST00000399973 TET3O43151 1660 aa12.87□□□□□ -0.35
USP16-202ENST00000399973 UGGT1Q9NYU2 1555 aa12.87□□□□□ -0.35
USP16-202ENST00000399973 NLRP1Q9C000 1473 aa12.87□□□□□ -0.35
USP16-202ENST00000399973 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
USP16-202ENST00000399973 PIK3C2BO00750 1634 aa12.86□□□□□ -0.35
USP16-202ENST00000399973 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
USP16-202ENST00000399973 RRBP1Q9P2E9 1410 aaKnown RBP12.86□□□□□ -0.35
USP16-202ENST00000399973 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
USP16-202ENST00000399973 ROCK1Q13464 1354 aa12.84□□□□□ -0.35
USP16-202ENST00000399973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP16-202ENST00000399973 NEURL4Q96JN8 1562 aa12.84□□□□□ -0.35
USP16-202ENST00000399973 SYNMO15061 1565 aa12.83□□□□□ -0.36
USP16-202ENST00000399973 PTPRTO14522 1441 aa12.83□□□□□ -0.36
USP16-202ENST00000399973 ARHGAP31Q2M1Z3 1444 aa12.83□□□□□ -0.36
USP16-202ENST00000399973 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
USP16-202ENST00000399973 DMRT2Q9Y5R5 561 aa12.83□□□□□ -0.36
USP16-202ENST00000399973 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
USP16-202ENST00000399973 E9PCH4 1651 aa12.83□□□□□ -0.36
USP16-202ENST00000399973 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
USP16-202ENST00000399973 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
USP16-202ENST00000399973 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
USP16-202ENST00000399973 ADGRB3O60242 1522 aa12.78□□□□□ -0.36
USP16-202ENST00000399973 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
USP16-202ENST00000399973 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
USP16-202ENST00000399973 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.36
USP16-202ENST00000399973 PKD2Q13563 968 aa12.77□□□□□ -0.37
USP16-202ENST00000399973 LTBP4Q8N2S1 1624 aa12.77□□□□□ -0.37
USP16-202ENST00000399973 THEMISQ8N1K5 641 aaPredicted RBP12.76□□□□□ -0.37
USP16-202ENST00000399973 NOS1P29475 1434 aa12.75□□□□□ -0.37
USP16-202ENST00000399973 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
USP16-202ENST00000399973 NAIPQ13075 1403 aa12.74□□□□□ -0.37
USP16-202ENST00000399973 NUP155O75694 1391 aa12.74□□□□□ -0.37
USP16-202ENST00000399973 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
USP16-202ENST00000399973 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
USP16-202ENST00000399973 SLIT1O75093 1534 aa12.73□□□□□ -0.37
USP16-202ENST00000399973 SCAF11Q99590 1463 aaKnown RBP12.73□□□□□ -0.37
USP16-202ENST00000399973 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
USP16-202ENST00000399973 ANKLE2Q86XL3 938 aa12.73□□□□□ -0.37
USP16-202ENST00000399973 FBXO41Q8TF61 875 aa12.72□□□□□ -0.37
USP16-202ENST00000399973 TMEM131LA2VDJ0 1609 aa12.72□□□□□ -0.37
USP16-202ENST00000399973 MED14O60244 1454 aa12.72□□□□□ -0.37
USP16-202ENST00000399973 ARHGAP23Q9P227 1491 aa12.72□□□□□ -0.37
USP16-202ENST00000399973 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
USP16-202ENST00000399973 STRCP1A6NGW2 1772 aa12.7□□□□□ -0.38
USP16-202ENST00000399973 IDI1Q13907 227 aa12.68□□□□□ -0.38
USP16-202ENST00000399973 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
USP16-202ENST00000399973 CPS1P31327 1500 aa12.67□□□□□ -0.38
USP16-202ENST00000399973 KIF1BO60333 1816 aa12.67□□□□□ -0.38
USP16-202ENST00000399973 IQSEC2Q5JU85 1478 aa12.67□□□□□ -0.38
USP16-202ENST00000399973 CLTCL1P53675 1640 aa12.67□□□□□ -0.38
USP16-202ENST00000399973 MSH5O43196 834 aa12.66□□□□□ -0.38
USP16-202ENST00000399973 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
USP16-202ENST00000399973 TXNDC2Q86VQ3 553 aa12.66□□□□□ -0.38
USP16-202ENST00000399973 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms