RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 ESF1Q9H501 851 aaKnown RBP27.55■■■□□ 2
SBF1-203ENST00000399627 CLTCQ00610 1675 aaKnown RBP27.53■■■□□ 2
SBF1-203ENST00000399627 PPP6R1Q9UPN7 881 aa27.52■■■□□ 2
SBF1-203ENST00000399627 CNTLNQ9NXG0 1405 aa27.51■■□□□ 1.99
SBF1-203ENST00000399627 ANKRD50Q9ULJ7 1429 aa27.51■■□□□ 1.99
SBF1-203ENST00000399627 MROH1Q8NDA8 1641 aa27.51■■□□□ 1.99
SBF1-203ENST00000399627 PLPPR3Q6T4P5 718 aa27.5■■□□□ 1.99
SBF1-203ENST00000399627 MROH2AA6NES4 1674 aa27.48■■□□□ 1.99
SBF1-203ENST00000399627 C3P01024 1663 aa27.47■■□□□ 1.99
SBF1-203ENST00000399627 DEPDC5O75140 1603 aa27.46■■□□□ 1.99
SBF1-203ENST00000399627 CEBPAP49715 358 aaPredicted RBP27.46■■□□□ 1.99
SBF1-203ENST00000399627 KDM5DQ9BY66 1539 aa27.46■■□□□ 1.99
SBF1-203ENST00000399627 FAM135AQ9P2D6 1515 aa27.45■■□□□ 1.98
SBF1-203ENST00000399627 PRDM15P57071 1507 aaPredicted RBP27.44■■□□□ 1.98
SBF1-203ENST00000399627 WASHC2CQ9Y4E1 1318 aa27.43■■□□□ 1.98
SBF1-203ENST00000399627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.98
SBF1-203ENST00000399627 CEP152O94986 1710 aa27.43■■□□□ 1.98
SBF1-203ENST00000399627 ZMYM3Q14202 1370 aa27.43■■□□□ 1.98
SBF1-203ENST00000399627 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
SBF1-203ENST00000399627 ABCC3O15438 1527 aa27.41■■□□□ 1.98
SBF1-203ENST00000399627 NAIPQ13075 1403 aa27.41■■□□□ 1.98
SBF1-203ENST00000399627 ZC3H13Q5T200 1668 aaKnown RBP27.4■■□□□ 1.98
SBF1-203ENST00000399627 HFM1A2PYH4 1435 aa27.38■■□□□ 1.97
SBF1-203ENST00000399627 KANK1Q14678 1352 aa27.37■■□□□ 1.97
SBF1-203ENST00000399627 UNC13BO14795 1591 aa27.36■■□□□ 1.97
SBF1-203ENST00000399627 SETD1BQ9UPS6 1966 aaKnown RBP27.36■■□□□ 1.97
SBF1-203ENST00000399627 VWDEQ8N2E2 1590 aa27.35■■□□□ 1.97
SBF1-203ENST00000399627 CAMSAP1Q5T5Y3 1602 aa27.34■■□□□ 1.97
SBF1-203ENST00000399627 CFAP65Q6ZU64 1925 aaKnown RBP27.33■■□□□ 1.97
SBF1-203ENST00000399627 PZPP20742 1482 aa27.3■■□□□ 1.96
SBF1-203ENST00000399627 LMTK2Q8IWU2 1503 aa27.29■■□□□ 1.96
SBF1-203ENST00000399627 NPATQ14207 1427 aa27.28■■□□□ 1.96
SBF1-203ENST00000399627 FBXO31Q5XUX0 539 aaPredicted RBP27.26■■□□□ 1.95
SBF1-203ENST00000399627 PREX1Q8TCU6 1659 aa27.26■■□□□ 1.95
SBF1-203ENST00000399627 NUP155O75694 1391 aa27.25■■□□□ 1.95
SBF1-203ENST00000399627 IQGAP3Q86VI3 1631 aa27.25■■□□□ 1.95
SBF1-203ENST00000399627 TET3O43151 1660 aa27.23■■□□□ 1.95
SBF1-203ENST00000399627 ARHGAP31Q2M1Z3 1444 aa27.23■■□□□ 1.95
SBF1-203ENST00000399627 EFCAB6Q5THR3 1501 aa27.21■■□□□ 1.95
SBF1-203ENST00000399627 LMTK3Q96Q04 1460 aa27.2■■□□□ 1.95
SBF1-203ENST00000399627 SETD5Q9C0A6 1442 aa27.2■■□□□ 1.94
SBF1-203ENST00000399627 TNRQ92752 1358 aa27.19■■□□□ 1.94
SBF1-203ENST00000399627 ERVK-7P63135 1459 aa27.19■■□□□ 1.94
SBF1-203ENST00000399627 UHRF1BP1Q6BDS2 1440 aa27.18■■□□□ 1.94
SBF1-203ENST00000399627 SPATA31D1Q6ZQQ2 1576 aa27.18■■□□□ 1.94
SBF1-203ENST00000399627 MYO3AQ8NEV4 1616 aa27.17■■□□□ 1.94
SBF1-203ENST00000399627 TRIM52Q96A61 297 aa27.17■■□□□ 1.94
SBF1-203ENST00000399627 E9PCH4 1651 aa27.14■■□□□ 1.94
SBF1-203ENST00000399627 RAB3GAP2Q9H2M9 1393 aa27.11■■□□□ 1.93
SBF1-203ENST00000399627 RPRD2Q5VT52 1461 aaKnown RBP27.11■■□□□ 1.93
SBF1-203ENST00000399627 ZNF142P52746 1687 aaPredicted RBP27.11■■□□□ 1.93
SBF1-203ENST00000399627 HSPA2P54652 639 aa27.1■■□□□ 1.93
SBF1-203ENST00000399627 CEP170BQ9Y4F5 1589 aaPredicted RBP27.09■■□□□ 1.93
SBF1-203ENST00000399627 NOS1P29475 1434 aa27.07■■□□□ 1.92
SBF1-203ENST00000399627 A2ML1A8K2U0 1454 aa27.07■■□□□ 1.92
SBF1-203ENST00000399627 TRIM26Q12899 539 aaPredicted RBP27.07■■□□□ 1.92
SBF1-203ENST00000399627 NLRP1Q9C000 1473 aa27.06■■□□□ 1.92
SBF1-203ENST00000399627 SYNMO15061 1565 aa27.06■■□□□ 1.92
SBF1-203ENST00000399627 SLC4A1APQ9BWU0 796 aaKnown RBP27.03■■□□□ 1.92
SBF1-203ENST00000399627 ACIN1Q9UKV3 1341 aaKnown RBP27.02■■□□□ 1.92
SBF1-203ENST00000399627 PKD2Q13563 968 aa27■■□□□ 1.91
SBF1-203ENST00000399627 SPHKAPQ2M3C7 1700 aa26.99■■□□□ 1.91
SBF1-203ENST00000399627 HRCP23327 699 aa26.98■■□□□ 1.91
SBF1-203ENST00000399627 PIK3C2BO00750 1634 aa26.98■■□□□ 1.91
SBF1-203ENST00000399627 UGGT1Q9NYU2 1555 aa26.97■■□□□ 1.91
SBF1-203ENST00000399627 MPHOSPH9Q99550 1183 aa26.97■■□□□ 1.91
SBF1-203ENST00000399627 IDI1Q13907 227 aa26.96■■□□□ 1.91
SBF1-203ENST00000399627 UBR1Q8IWV7 1749 aa26.96■■□□□ 1.91
SBF1-203ENST00000399627 PTPRTO14522 1441 aa26.94■■□□□ 1.9
SBF1-203ENST00000399627 SLC52A1Q9NWF4 448 aa26.94■■□□□ 1.9
SBF1-203ENST00000399627 STRCQ7RTU9 1775 aa26.93■■□□□ 1.9
SBF1-203ENST00000399627 THEMISQ8N1K5 641 aaPredicted RBP26.92■■□□□ 1.9
SBF1-203ENST00000399627 FOXD1Q16676 465 aa26.91■■□□□ 1.9
SBF1-203ENST00000399627 PLA2R1Q13018 1463 aa26.89■■□□□ 1.9
SBF1-203ENST00000399627 MYO5BQ9ULV0 1848 aa26.89■■□□□ 1.9
SBF1-203ENST00000399627 STAG3Q9UJ98 1225 aa26.89■■□□□ 1.9
SBF1-203ENST00000399627 KDM5AP29375 1690 aaKnown RBP26.89■■□□□ 1.89
SBF1-203ENST00000399627 ADGRB3O60242 1522 aa26.88■■□□□ 1.89
SBF1-203ENST00000399627 TRPM2O94759 1503 aa26.88■■□□□ 1.89
SBF1-203ENST00000399627 CLTCL1P53675 1640 aa26.85■■□□□ 1.89
SBF1-203ENST00000399627 NCKAP5LQ9HCH0 1330 aa26.85■■□□□ 1.89
SBF1-203ENST00000399627 TMEM131LA2VDJ0 1609 aa26.84■■□□□ 1.89
SBF1-203ENST00000399627 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
SBF1-203ENST00000399627 CHGAP10645 457 aaKnown RBP26.82■■□□□ 1.88
SBF1-203ENST00000399627 ARHGAP23Q9P227 1491 aa26.8■■□□□ 1.88
SBF1-203ENST00000399627 SLIT1O75093 1534 aa26.8■■□□□ 1.88
SBF1-203ENST00000399627 KIF1BO60333 1816 aa26.79■■□□□ 1.88
SBF1-203ENST00000399627 ANKLE2Q86XL3 938 aa26.79■■□□□ 1.88
SBF1-203ENST00000399627 TMEM2Q9UHN6 1383 aa26.78■■□□□ 1.88
SBF1-203ENST00000399627 NEURL4Q96JN8 1562 aa26.76■■□□□ 1.87
SBF1-203ENST00000399627 DMRT2Q9Y5R5 561 aa26.75■■□□□ 1.87
SBF1-203ENST00000399627 LTKP29376 864 aa26.73■■□□□ 1.87
SBF1-203ENST00000399627 TXNDC2Q86VQ3 553 aa26.73■■□□□ 1.87
SBF1-203ENST00000399627 PCGF6Q9BYE7 350 aa26.73■■□□□ 1.87
SBF1-203ENST00000399627 SCAF11Q99590 1463 aaKnown RBP26.73■■□□□ 1.87
SBF1-203ENST00000399627 CCDC144AA2RUR9 1427 aa26.73■■□□□ 1.87
SBF1-203ENST00000399627 EID1Q9Y6B2 187 aa26.71■■□□□ 1.87
SBF1-203ENST00000399627 RIMS2Q9UQ26 1411 aa26.71■■□□□ 1.87
SBF1-203ENST00000399627 ANKRD30BQ9BXX2 1392 aa26.7■■□□□ 1.86
SBF1-203ENST00000399627 MED14O60244 1454 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms