RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 NGDNQ8NEJ9 315 aaKnown RBP16.48■□□□□ 0.23
ITSN1-208ENST00000399349 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
ITSN1-208ENST00000399349 WASHC2CQ9Y4E1 1318 aa16.47■□□□□ 0.23
ITSN1-208ENST00000399349 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
ITSN1-208ENST00000399349 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
ITSN1-208ENST00000399349 HMMRO75330 724 aa16.45■□□□□ 0.22
ITSN1-208ENST00000399349 AMPHP49418 695 aa16.45■□□□□ 0.22
ITSN1-208ENST00000399349 EIF3AQ14152 1382 aaKnown RBP16.45■□□□□ 0.22
ITSN1-208ENST00000399349 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
ITSN1-208ENST00000399349 FOXD4L6Q3SYB3 417 aaPredicted RBP16.44■□□□□ 0.22
ITSN1-208ENST00000399349 FOXD4L3Q6VB84 417 aaPredicted RBP16.44■□□□□ 0.22
ITSN1-208ENST00000399349 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
ITSN1-208ENST00000399349 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
ITSN1-208ENST00000399349 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
ITSN1-208ENST00000399349 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
ITSN1-208ENST00000399349 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
ITSN1-208ENST00000399349 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
ITSN1-208ENST00000399349 SYAP1Q96A49 352 aaPredicted RBP16.41■□□□□ 0.22
ITSN1-208ENST00000399349 PDE4AP27815 886 aa16.41■□□□□ 0.22
ITSN1-208ENST00000399349 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
ITSN1-208ENST00000399349 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
ITSN1-208ENST00000399349 ANKRD45Q5TZF3 282 aa16.39■□□□□ 0.21
ITSN1-208ENST00000399349 CREBRFQ8IUR6 639 aa16.39■□□□□ 0.21
ITSN1-208ENST00000399349 TOMM22Q9NS69 142 aa16.39■□□□□ 0.21
ITSN1-208ENST00000399349 APAF1O14727 1248 aa16.39■□□□□ 0.21
ITSN1-208ENST00000399349 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
ITSN1-208ENST00000399349 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
ITSN1-208ENST00000399349 GPATCH3Q96I76 525 aa16.38■□□□□ 0.21
ITSN1-208ENST00000399349 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
ITSN1-208ENST00000399349 PTMSP20962 102 aa16.38■□□□□ 0.21
ITSN1-208ENST00000399349 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
ITSN1-208ENST00000399349 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
ITSN1-208ENST00000399349 RRP1P56182 461 aaKnown RBP16.36■□□□□ 0.21
ITSN1-208ENST00000399349 USP35Q9P2H5 1018 aa16.35■□□□□ 0.21
ITSN1-208ENST00000399349 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
ITSN1-208ENST00000399349 ST18O60284 1047 aa16.35■□□□□ 0.21
ITSN1-208ENST00000399349 PDE4CQ08493 712 aa16.35■□□□□ 0.21
ITSN1-208ENST00000399349 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
ITSN1-208ENST00000399349 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
ITSN1-208ENST00000399349 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
ITSN1-208ENST00000399349 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
ITSN1-208ENST00000399349 RASSF8Q8NHQ8 419 aa16.34■□□□□ 0.21
ITSN1-208ENST00000399349 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
ITSN1-208ENST00000399349 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
ITSN1-208ENST00000399349 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
ITSN1-208ENST00000399349 MINK1Q8N4C8 1332 aaPredicted RBP16.33■□□□□ 0.21
ITSN1-208ENST00000399349 CHMP4AQ9BY43 222 aa16.33■□□□□ 0.2
ITSN1-208ENST00000399349 KIF16BQ96L93 1317 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 ZKSCAN2Q63HK3 967 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 NECTIN2Q92692 538 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
ITSN1-208ENST00000399349 PHLDB1Q86UU1 1377 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 USP47Q96K76 1375 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 FRAT2O75474 233 aaPredicted RBP16.32■□□□□ 0.2
ITSN1-208ENST00000399349 RSPH4AQ5TD94 716 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
ITSN1-208ENST00000399349 GSE1Q14687 1217 aa16.31■□□□□ 0.2
ITSN1-208ENST00000399349 HDAC5Q9UQL6 1122 aa16.31■□□□□ 0.2
ITSN1-208ENST00000399349 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
ITSN1-208ENST00000399349 MSH5O43196 834 aa16.3■□□□□ 0.2
ITSN1-208ENST00000399349 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
ITSN1-208ENST00000399349 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
ITSN1-208ENST00000399349 E9PSI1 815 aa16.3■□□□□ 0.2
ITSN1-208ENST00000399349 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
ITSN1-208ENST00000399349 WIZO95785 1651 aa16.29■□□□□ 0.2
ITSN1-208ENST00000399349 TPM4P67936 248 aa16.29■□□□□ 0.2
ITSN1-208ENST00000399349 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
ITSN1-208ENST00000399349 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
ITSN1-208ENST00000399349 COG3Q96JB2 828 aa16.28■□□□□ 0.2
ITSN1-208ENST00000399349 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
ITSN1-208ENST00000399349 HSP90AA2PQ14568 343 aaPredicted RBP16.26■□□□□ 0.19
ITSN1-208ENST00000399349 CSPP1Q1MSJ5 1256 aa16.25■□□□□ 0.19
ITSN1-208ENST00000399349 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
ITSN1-208ENST00000399349 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
ITSN1-208ENST00000399349 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
ITSN1-208ENST00000399349 H3BQV1 296 aa16.24■□□□□ 0.19
ITSN1-208ENST00000399349 TEFQ10587 303 aa16.24■□□□□ 0.19
ITSN1-208ENST00000399349 IFFO2Q5TF58 517 aa16.24■□□□□ 0.19
ITSN1-208ENST00000399349 DDX11L8A8MPP1 907 aa16.24■□□□□ 0.19
ITSN1-208ENST00000399349 PES1O00541 588 aaKnown RBP16.24■□□□□ 0.19
ITSN1-208ENST00000399349 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
ITSN1-208ENST00000399349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.23■□□□□ 0.19
ITSN1-208ENST00000399349 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
ITSN1-208ENST00000399349 RIPK4P57078 832 aa16.23■□□□□ 0.19
ITSN1-208ENST00000399349 TMX4Q9H1E5 349 aaPredicted RBP16.23■□□□□ 0.19
ITSN1-208ENST00000399349 FAM184AQ8NB25 1140 aa16.22■□□□□ 0.19
ITSN1-208ENST00000399349 ZNF644Q9H582 1327 aaPredicted RBP16.22■□□□□ 0.19
ITSN1-208ENST00000399349 G3V3G9 751 aa16.22■□□□□ 0.19
ITSN1-208ENST00000399349 DCAF8Q5TAQ9 597 aa16.22■□□□□ 0.19
ITSN1-208ENST00000399349 MCTP1Q6DN14 999 aa16.22■□□□□ 0.19
ITSN1-208ENST00000399349 PHF14O94880 888 aa16.21■□□□□ 0.19
ITSN1-208ENST00000399349 DIAPH3Q9NSV4 1193 aa16.21■□□□□ 0.18
ITSN1-208ENST00000399349 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
ITSN1-208ENST00000399349 C9orf78Q9NZ63 289 aaPredicted RBP16.2■□□□□ 0.18
ITSN1-208ENST00000399349 VPS53Q5VIR6 699 aa16.2■□□□□ 0.18
ITSN1-208ENST00000399349 DZIP1LQ8IYY4 767 aaKnown RBP16.2■□□□□ 0.18
ITSN1-208ENST00000399349 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
ITSN1-208ENST00000399349 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
ITSN1-208ENST00000399349 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms