RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
ITSN1-207ENST00000399338 UQCRHLA0A096LP55 91 aa14.08□□□□□ -0.15
ITSN1-207ENST00000399338 UQCRHP07919 91 aa14.08□□□□□ -0.15
ITSN1-207ENST00000399338 FTSJ3Q8IY81 847 aaKnown RBP14.08□□□□□ -0.15
ITSN1-207ENST00000399338 ANP32BQ92688 251 aaKnown RBP14.08□□□□□ -0.15
ITSN1-207ENST00000399338 LETM1O95202 739 aaPredicted RBP14.08□□□□□ -0.16
ITSN1-207ENST00000399338 C20orf194Q5TEA3 1177 aa14.08□□□□□ -0.16
ITSN1-207ENST00000399338 CCDC173Q0VFZ6 552 aa14.07□□□□□ -0.16
ITSN1-207ENST00000399338 GAS2L3Q86XJ1 694 aa14.07□□□□□ -0.16
ITSN1-207ENST00000399338 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
ITSN1-207ENST00000399338 VGLL3A8MV65 326 aa14.07□□□□□ -0.16
ITSN1-207ENST00000399338 SEC24BO95487 1268 aa14.06□□□□□ -0.16
ITSN1-207ENST00000399338 BRD4O60885 1362 aaPredicted RBP14.06□□□□□ -0.16
ITSN1-207ENST00000399338 ARID3AQ99856 593 aa14.06□□□□□ -0.16
ITSN1-207ENST00000399338 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
ITSN1-207ENST00000399338 NAIPQ13075 1403 aa14.06□□□□□ -0.16
ITSN1-207ENST00000399338 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
ITSN1-207ENST00000399338 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
ITSN1-207ENST00000399338 PTPRKQ15262 1439 aa14.05□□□□□ -0.16
ITSN1-207ENST00000399338 L3MBTL2Q969R5 705 aa14.05□□□□□ -0.16
ITSN1-207ENST00000399338 CUX1P39880 1505 aa14.04□□□□□ -0.16
ITSN1-207ENST00000399338 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
ITSN1-207ENST00000399338 FMN1Q68DA7 1419 aa14.03□□□□□ -0.16
ITSN1-207ENST00000399338 ZNF500O60304 480 aaPredicted RBP14.03□□□□□ -0.16
ITSN1-207ENST00000399338 NBPF8Q3BBV2 869 aa14.03□□□□□ -0.16
ITSN1-207ENST00000399338 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
ITSN1-207ENST00000399338 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
ITSN1-207ENST00000399338 DDX11L8A8MPP1 907 aa14.02□□□□□ -0.16
ITSN1-207ENST00000399338 TAF3Q5VWG9 929 aa14.02□□□□□ -0.16
ITSN1-207ENST00000399338 HECW1Q76N89 1606 aa14.02□□□□□ -0.17
ITSN1-207ENST00000399338 CHRM1P11229 460 aaPredicted RBP14.01□□□□□ -0.17
ITSN1-207ENST00000399338 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
ITSN1-207ENST00000399338 BCORL1Q5H9F3 1711 aa14.01□□□□□ -0.17
ITSN1-207ENST00000399338 KIF27Q86VH2 1401 aa14.01□□□□□ -0.17
ITSN1-207ENST00000399338 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
ITSN1-207ENST00000399338 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
ITSN1-207ENST00000399338 HS1BP3Q53T59 392 aa14□□□□□ -0.17
ITSN1-207ENST00000399338 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
ITSN1-207ENST00000399338 TEX2Q8IWB9 1127 aa13.99□□□□□ -0.17
ITSN1-207ENST00000399338 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
ITSN1-207ENST00000399338 MYBBP1AQ9BQG0 1328 aaKnown RBP13.99□□□□□ -0.17
ITSN1-207ENST00000399338 TBC1D32Q96NH3 1257 aa13.99□□□□□ -0.17
ITSN1-207ENST00000399338 NOL7Q9UMY1 257 aaKnown RBP13.98□□□□□ -0.17
ITSN1-207ENST00000399338 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
ITSN1-207ENST00000399338 SASS6Q6UVJ0 657 aa13.97□□□□□ -0.17
ITSN1-207ENST00000399338 CFTRP13569 1480 aa13.96□□□□□ -0.17
ITSN1-207ENST00000399338 KIF15Q9NS87 1388 aa13.96□□□□□ -0.17
ITSN1-207ENST00000399338 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.17
ITSN1-207ENST00000399338 NASPP49321 788 aaPredicted RBP13.95□□□□□ -0.18
ITSN1-207ENST00000399338 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
ITSN1-207ENST00000399338 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
ITSN1-207ENST00000399338 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
ITSN1-207ENST00000399338 PCF11O94913 1555 aaKnown RBP13.94□□□□□ -0.18
ITSN1-207ENST00000399338 ZBTB22O15209 634 aa13.94□□□□□ -0.18
ITSN1-207ENST00000399338 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
ITSN1-207ENST00000399338 CBX1P83916 185 aa13.93□□□□□ -0.18
ITSN1-207ENST00000399338 RALBP1Q15311 655 aa13.93□□□□□ -0.18
ITSN1-207ENST00000399338 INSRP06213 1382 aa13.93□□□□□ -0.18
ITSN1-207ENST00000399338 SCAPERQ9BY12 1400 aa13.92□□□□□ -0.18
ITSN1-207ENST00000399338 ZMYM4Q5VZL5 1548 aa13.92□□□□□ -0.18
ITSN1-207ENST00000399338 SKOR2Q2VWA4 1001 aaPredicted RBP13.92□□□□□ -0.18
ITSN1-207ENST00000399338 SECISBP2LQ93073 1101 aaKnown RBP13.92□□□□□ -0.18
ITSN1-207ENST00000399338 CTTNBP2Q8WZ74 1663 aa13.92□□□□□ -0.18
ITSN1-207ENST00000399338 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
ITSN1-207ENST00000399338 BRD2P25440 801 aaKnown RBP13.91□□□□□ -0.18
ITSN1-207ENST00000399338 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-207ENST00000399338 DDIT3P35638 169 aa13.91□□□□□ -0.18
ITSN1-207ENST00000399338 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
ITSN1-207ENST00000399338 ZNF710Q8N1W2 664 aa13.91□□□□□ -0.18
ITSN1-207ENST00000399338 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
ITSN1-207ENST00000399338 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
ITSN1-207ENST00000399338 EIF3AQ14152 1382 aaKnown RBP13.9□□□□□ -0.18
ITSN1-207ENST00000399338 SLC20A2Q08357 652 aa13.9□□□□□ -0.18
ITSN1-207ENST00000399338 DNTTIP2Q5QJE6 756 aaKnown RBP13.9□□□□□ -0.18
ITSN1-207ENST00000399338 UPF2Q9HAU5 1272 aaKnown RBP13.9□□□□□ -0.18
ITSN1-207ENST00000399338 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-207ENST00000399338 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.19
ITSN1-207ENST00000399338 CCDC144AA2RUR9 1427 aa13.89□□□□□ -0.19
ITSN1-207ENST00000399338 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
ITSN1-207ENST00000399338 PANK3Q9H999 370 aa13.89□□□□□ -0.19
ITSN1-207ENST00000399338 NCOA3Q9Y6Q9 1424 aa13.89□□□□□ -0.19
ITSN1-207ENST00000399338 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
ITSN1-207ENST00000399338 PDLIM2Q96JY6 352 aa13.89□□□□□ -0.19
ITSN1-207ENST00000399338 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
ITSN1-207ENST00000399338 IGHDP01880 384 aa13.88□□□□□ -0.19
ITSN1-207ENST00000399338 MCM5P33992 734 aa13.88□□□□□ -0.19
ITSN1-207ENST00000399338 IRX5P78411 483 aaPredicted RBP13.88□□□□□ -0.19
ITSN1-207ENST00000399338 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
ITSN1-207ENST00000399338 RGS22Q8NE09 1264 aa13.88□□□□□ -0.19
ITSN1-207ENST00000399338 MYRIPQ8NFW9 859 aa13.88□□□□□ -0.19
ITSN1-207ENST00000399338 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
ITSN1-207ENST00000399338 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
ITSN1-207ENST00000399338 PTMSP20962 102 aa13.86□□□□□ -0.19
ITSN1-207ENST00000399338 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
ITSN1-207ENST00000399338 POLR3GLQ9BT43 218 aa13.86□□□□□ -0.19
ITSN1-207ENST00000399338 KDM5CP41229 1560 aa13.86□□□□□ -0.19
ITSN1-207ENST00000399338 E9PCH4 1651 aa13.86□□□□□ -0.19
ITSN1-207ENST00000399338 USP47Q96K76 1375 aa13.86□□□□□ -0.19
ITSN1-207ENST00000399338 IRX3P78415 501 aaPredicted RBP13.86□□□□□ -0.19
ITSN1-207ENST00000399338 TNPO1Q92973 898 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms