RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ABCC5O15440 1437 aa23.17■■□□□ 1.3
SMIM11A-203ENST00000399299 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
SMIM11A-203ENST00000399299 DUOX2Q9NRD8 1548 aa23.15■■□□□ 1.3
SMIM11A-203ENST00000399299 DAPK1P53355 1430 aa23.15■■□□□ 1.3
SMIM11A-203ENST00000399299 ZNF142P52746 1687 aaPredicted RBP23.14■■□□□ 1.29
SMIM11A-203ENST00000399299 MYO3AQ8NEV4 1616 aa23.14■■□□□ 1.29
SMIM11A-203ENST00000399299 STRCQ7RTU9 1775 aa23.14■■□□□ 1.29
SMIM11A-203ENST00000399299 ZC3H13Q5T200 1668 aaKnown RBP23.12■■□□□ 1.29
SMIM11A-203ENST00000399299 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
SMIM11A-203ENST00000399299 PZPP20742 1482 aa23.1■■□□□ 1.29
SMIM11A-203ENST00000399299 MROH1Q8NDA8 1641 aa23.09■■□□□ 1.29
SMIM11A-203ENST00000399299 WASHC2CQ9Y4E1 1318 aa23.08■■□□□ 1.29
SMIM11A-203ENST00000399299 CEP170BQ9Y4F5 1589 aaPredicted RBP23.08■■□□□ 1.29
SMIM11A-203ENST00000399299 ERBINQ96RT1 1412 aa23.08■■□□□ 1.28
SMIM11A-203ENST00000399299 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
SMIM11A-203ENST00000399299 ABCC3O15438 1527 aa23.06■■□□□ 1.28
SMIM11A-203ENST00000399299 NCOA1Q15788 1441 aa23.05■■□□□ 1.28
SMIM11A-203ENST00000399299 ADGRL2O95490 1459 aa23.04■■□□□ 1.28
SMIM11A-203ENST00000399299 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
SMIM11A-203ENST00000399299 PRDM15P57071 1507 aaPredicted RBP23.03■■□□□ 1.28
SMIM11A-203ENST00000399299 ANKRD30AQ9BXX3 1397 aa23.03■■□□□ 1.28
SMIM11A-203ENST00000399299 PTPRTO14522 1441 aa23.02■■□□□ 1.28
SMIM11A-203ENST00000399299 DEPDC5O75140 1603 aa23.02■■□□□ 1.28
SMIM11A-203ENST00000399299 ILDR1Q86SU0 546 aaPredicted RBP23.02■■□□□ 1.28
SMIM11A-203ENST00000399299 A2ML1A8K2U0 1454 aa23.01■■□□□ 1.27
SMIM11A-203ENST00000399299 PLA2R1Q13018 1463 aa23.01■■□□□ 1.27
SMIM11A-203ENST00000399299 CEP152O94986 1710 aa23.01■■□□□ 1.27
SMIM11A-203ENST00000399299 TNRQ92752 1358 aa23.01■■□□□ 1.27
SMIM11A-203ENST00000399299 RRP7BPQ9NSQ0 103 aa23■■□□□ 1.27
SMIM11A-203ENST00000399299 FAM50AQ14320 339 aaKnown RBP22.98■■□□□ 1.27
SMIM11A-203ENST00000399299 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
SMIM11A-203ENST00000399299 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
SMIM11A-203ENST00000399299 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
SMIM11A-203ENST00000399299 NLRP1Q9C000 1473 aa22.96■■□□□ 1.27
SMIM11A-203ENST00000399299 ERVK-7P63135 1459 aa22.92■■□□□ 1.26
SMIM11A-203ENST00000399299 ARHGAP31Q2M1Z3 1444 aa22.92■■□□□ 1.26
SMIM11A-203ENST00000399299 FBXO41Q8TF61 875 aa22.92■■□□□ 1.26
SMIM11A-203ENST00000399299 PKD2Q13563 968 aa22.91■■□□□ 1.26
SMIM11A-203ENST00000399299 VWDEQ8N2E2 1590 aa22.91■■□□□ 1.26
SMIM11A-203ENST00000399299 KANK1Q14678 1352 aa22.9■■□□□ 1.26
SMIM11A-203ENST00000399299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.9■■□□□ 1.26
SMIM11A-203ENST00000399299 LMTK2Q8IWU2 1503 aa22.89■■□□□ 1.26
SMIM11A-203ENST00000399299 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
SMIM11A-203ENST00000399299 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
SMIM11A-203ENST00000399299 CERKQ8TCT0 537 aa22.87■■□□□ 1.25
SMIM11A-203ENST00000399299 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
SMIM11A-203ENST00000399299 NCKAP5LQ9HCH0 1330 aa22.86■■□□□ 1.25
SMIM11A-203ENST00000399299 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
SMIM11A-203ENST00000399299 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
SMIM11A-203ENST00000399299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.25
SMIM11A-203ENST00000399299 LTBP4Q8N2S1 1624 aa22.83■■□□□ 1.25
SMIM11A-203ENST00000399299 THEMISQ8N1K5 641 aaPredicted RBP22.83■■□□□ 1.25
SMIM11A-203ENST00000399299 NEURL4Q96JN8 1562 aa22.82■■□□□ 1.24
SMIM11A-203ENST00000399299 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
SMIM11A-203ENST00000399299 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
SMIM11A-203ENST00000399299 UNC13BO14795 1591 aa22.8■■□□□ 1.24
SMIM11A-203ENST00000399299 UBR1Q8IWV7 1749 aa22.79■■□□□ 1.24
SMIM11A-203ENST00000399299 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
SMIM11A-203ENST00000399299 ANKLE2Q86XL3 938 aa22.76■■□□□ 1.23
SMIM11A-203ENST00000399299 MED14O60244 1454 aa22.76■■□□□ 1.23
SMIM11A-203ENST00000399299 IQSEC2Q5JU85 1478 aa22.76■■□□□ 1.23
SMIM11A-203ENST00000399299 TET3O43151 1660 aa22.76■■□□□ 1.23
SMIM11A-203ENST00000399299 KDM5AP29375 1690 aaKnown RBP22.75■■□□□ 1.23
SMIM11A-203ENST00000399299 RPRD2Q5VT52 1461 aaKnown RBP22.75■■□□□ 1.23
SMIM11A-203ENST00000399299 GCC2Q8IWJ2 1684 aa22.74■■□□□ 1.23
SMIM11A-203ENST00000399299 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
SMIM11A-203ENST00000399299 NOS1P29475 1434 aa22.73■■□□□ 1.23
SMIM11A-203ENST00000399299 SYNMO15061 1565 aa22.72■■□□□ 1.23
SMIM11A-203ENST00000399299 ZNF335Q9H4Z2 1342 aaPredicted RBP22.71■■□□□ 1.23
SMIM11A-203ENST00000399299 SLIT1O75093 1534 aa22.71■■□□□ 1.23
SMIM11A-203ENST00000399299 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
SMIM11A-203ENST00000399299 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
SMIM11A-203ENST00000399299 NPHP4O75161 1426 aaPredicted RBP22.7■■□□□ 1.22
SMIM11A-203ENST00000399299 ARHGAP23Q9P227 1491 aa22.7■■□□□ 1.22
SMIM11A-203ENST00000399299 ITGAEP38570 1179 aa22.69■■□□□ 1.22
SMIM11A-203ENST00000399299 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
SMIM11A-203ENST00000399299 E9PCH4 1651 aa22.65■■□□□ 1.22
SMIM11A-203ENST00000399299 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
SMIM11A-203ENST00000399299 CPS1P31327 1500 aa22.63■■□□□ 1.21
SMIM11A-203ENST00000399299 IDI1Q13907 227 aa22.63■■□□□ 1.21
SMIM11A-203ENST00000399299 SLC52A1Q9NWF4 448 aa22.63■■□□□ 1.21
SMIM11A-203ENST00000399299 TMEM2Q9UHN6 1383 aa22.62■■□□□ 1.21
SMIM11A-203ENST00000399299 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
SMIM11A-203ENST00000399299 NUP155O75694 1391 aa22.6■■□□□ 1.21
SMIM11A-203ENST00000399299 LTKP29376 864 aa22.58■■□□□ 1.21
SMIM11A-203ENST00000399299 EID1Q9Y6B2 187 aa22.58■■□□□ 1.21
SMIM11A-203ENST00000399299 NAIPQ13075 1403 aa22.57■■□□□ 1.2
SMIM11A-203ENST00000399299 TXNDC2Q86VQ3 553 aa22.57■■□□□ 1.2
SMIM11A-203ENST00000399299 TMEM131LA2VDJ0 1609 aa22.54■■□□□ 1.2
SMIM11A-203ENST00000399299 HFM1A2PYH4 1435 aa22.54■■□□□ 1.2
SMIM11A-203ENST00000399299 MYO5BQ9ULV0 1848 aa22.54■■□□□ 1.2
SMIM11A-203ENST00000399299 STRCP1A6NGW2 1772 aa22.53■■□□□ 1.2
SMIM11A-203ENST00000399299 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
SMIM11A-203ENST00000399299 ZFYVE9O95405 1425 aa22.48■■□□□ 1.19
SMIM11A-203ENST00000399299 UBAP1LF5GYI3 381 aa22.46■■□□□ 1.19
SMIM11A-203ENST00000399299 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.18
SMIM11A-203ENST00000399299 RIMS2Q9UQ26 1411 aa22.44■■□□□ 1.18
SMIM11A-203ENST00000399299 HDGFP51858 240 aaKnown RBP22.42■■□□□ 1.18
SMIM11A-203ENST00000399299 PLEKHG1Q9ULL1 1385 aa22.41■■□□□ 1.18
SMIM11A-203ENST00000399299 TRPM2O94759 1503 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms