RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
HLA-DQB1-203ENST00000399082 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB1-203ENST00000399082 NAIPQ13075 1403 aa18.84■□□□□ 0.61
HLA-DQB1-203ENST00000399082 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB1-203ENST00000399082 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
HLA-DQB1-203ENST00000399082 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.6
HLA-DQB1-203ENST00000399082 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
HLA-DQB1-203ENST00000399082 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
HLA-DQB1-203ENST00000399082 KDM4FA0A1W2PPD8 638 aa18.81■□□□□ 0.6
HLA-DQB1-203ENST00000399082 KIF3BO15066 747 aa18.8■□□□□ 0.6
HLA-DQB1-203ENST00000399082 MLECQ14165 292 aa18.79■□□□□ 0.6
HLA-DQB1-203ENST00000399082 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
HLA-DQB1-203ENST00000399082 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
HLA-DQB1-203ENST00000399082 UNC13BO14795 1591 aa18.76■□□□□ 0.59
HLA-DQB1-203ENST00000399082 VWDEQ8N2E2 1590 aa18.76■□□□□ 0.59
HLA-DQB1-203ENST00000399082 RIMS1Q86UR5 1692 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-203ENST00000399082 GGT6Q6P531 493 aa18.75■□□□□ 0.59
HLA-DQB1-203ENST00000399082 KDM5DQ9BY66 1539 aa18.74■□□□□ 0.59
HLA-DQB1-203ENST00000399082 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-203ENST00000399082 ABCC3O15438 1527 aa18.73■□□□□ 0.59
HLA-DQB1-203ENST00000399082 FAM135AQ9P2D6 1515 aa18.72■□□□□ 0.59
HLA-DQB1-203ENST00000399082 CEP152O94986 1710 aa18.71■□□□□ 0.59
HLA-DQB1-203ENST00000399082 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-203ENST00000399082 MROH2AA6NES4 1674 aa18.7■□□□□ 0.58
HLA-DQB1-203ENST00000399082 ZC3H13Q5T200 1668 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB1-203ENST00000399082 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
HLA-DQB1-203ENST00000399082 PTPRMP28827 1452 aa18.69■□□□□ 0.58
HLA-DQB1-203ENST00000399082 LMTK2Q8IWU2 1503 aa18.68■□□□□ 0.58
HLA-DQB1-203ENST00000399082 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
HLA-DQB1-203ENST00000399082 CNTLNQ9NXG0 1405 aa18.67■□□□□ 0.58
HLA-DQB1-203ENST00000399082 C3P01024 1663 aa18.67■□□□□ 0.58
HLA-DQB1-203ENST00000399082 CAMSAP1Q5T5Y3 1602 aa18.66■□□□□ 0.58
HLA-DQB1-203ENST00000399082 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
HLA-DQB1-203ENST00000399082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
HLA-DQB1-203ENST00000399082 WASHC2CQ9Y4E1 1318 aa18.63■□□□□ 0.57
HLA-DQB1-203ENST00000399082 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
HLA-DQB1-203ENST00000399082 EFCAB6Q5THR3 1501 aa18.63■□□□□ 0.57
HLA-DQB1-203ENST00000399082 PZPP20742 1482 aa18.62■□□□□ 0.57
HLA-DQB1-203ENST00000399082 TET3O43151 1660 aa18.62■□□□□ 0.57
HLA-DQB1-203ENST00000399082 NUP155O75694 1391 aa18.61■□□□□ 0.57
HLA-DQB1-203ENST00000399082 KANK1Q14678 1352 aa18.61■□□□□ 0.57
HLA-DQB1-203ENST00000399082 CEBPAP49715 358 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-203ENST00000399082 NPATQ14207 1427 aa18.59■□□□□ 0.57
HLA-DQB1-203ENST00000399082 ARHGAP31Q2M1Z3 1444 aa18.59■□□□□ 0.57
HLA-DQB1-203ENST00000399082 E9PCH4 1651 aa18.58■□□□□ 0.57
HLA-DQB1-203ENST00000399082 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.56
HLA-DQB1-203ENST00000399082 PREX1Q8TCU6 1659 aa18.55■□□□□ 0.56
HLA-DQB1-203ENST00000399082 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
HLA-DQB1-203ENST00000399082 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
HLA-DQB1-203ENST00000399082 HRCP23327 699 aa18.54■□□□□ 0.56
HLA-DQB1-203ENST00000399082 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-203ENST00000399082 TRIM52Q96A61 297 aa18.53■□□□□ 0.56
HLA-DQB1-203ENST00000399082 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB1-203ENST00000399082 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.55
HLA-DQB1-203ENST00000399082 SYNMO15061 1565 aa18.51■□□□□ 0.55
HLA-DQB1-203ENST00000399082 NOS1P29475 1434 aa18.51■□□□□ 0.55
HLA-DQB1-203ENST00000399082 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
HLA-DQB1-203ENST00000399082 MYO3AQ8NEV4 1616 aa18.49■□□□□ 0.55
HLA-DQB1-203ENST00000399082 TNRQ92752 1358 aa18.47■□□□□ 0.55
HLA-DQB1-203ENST00000399082 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
HLA-DQB1-203ENST00000399082 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-203ENST00000399082 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
HLA-DQB1-203ENST00000399082 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.55
HLA-DQB1-203ENST00000399082 SETD1BQ9UPS6 1966 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-203ENST00000399082 PKD2Q13563 968 aa18.46■□□□□ 0.55
HLA-DQB1-203ENST00000399082 PTPRTO14522 1441 aa18.46■□□□□ 0.55
HLA-DQB1-203ENST00000399082 ACIN1Q9UKV3 1341 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-203ENST00000399082 UGGT1Q9NYU2 1555 aa18.45■□□□□ 0.54
HLA-DQB1-203ENST00000399082 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-203ENST00000399082 PIK3C2BO00750 1634 aa18.44■□□□□ 0.54
HLA-DQB1-203ENST00000399082 LMTK3Q96Q04 1460 aa18.44■□□□□ 0.54
HLA-DQB1-203ENST00000399082 TRPM2O94759 1503 aa18.42■□□□□ 0.54
HLA-DQB1-203ENST00000399082 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-203ENST00000399082 NLRP1Q9C000 1473 aa18.4■□□□□ 0.54
HLA-DQB1-203ENST00000399082 UHRF1BP1Q6BDS2 1440 aa18.4■□□□□ 0.54
HLA-DQB1-203ENST00000399082 A2ML1A8K2U0 1454 aa18.39■□□□□ 0.54
HLA-DQB1-203ENST00000399082 CLTCL1P53675 1640 aa18.39■□□□□ 0.53
HLA-DQB1-203ENST00000399082 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB1-203ENST00000399082 UBR1Q8IWV7 1749 aa18.37■□□□□ 0.53
HLA-DQB1-203ENST00000399082 IDI1Q13907 227 aa18.36■□□□□ 0.53
HLA-DQB1-203ENST00000399082 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-203ENST00000399082 ADGRB3O60242 1522 aa18.34■□□□□ 0.53
HLA-DQB1-203ENST00000399082 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
HLA-DQB1-203ENST00000399082 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
HLA-DQB1-203ENST00000399082 TMEM131LA2VDJ0 1609 aa18.34■□□□□ 0.53
HLA-DQB1-203ENST00000399082 SLC52A1Q9NWF4 448 aa18.33■□□□□ 0.52
HLA-DQB1-203ENST00000399082 HSPA2P54652 639 aa18.3■□□□□ 0.52
HLA-DQB1-203ENST00000399082 ARHGAP23Q9P227 1491 aa18.27■□□□□ 0.52
HLA-DQB1-203ENST00000399082 CCDC144AA2RUR9 1427 aa18.27■□□□□ 0.52
HLA-DQB1-203ENST00000399082 KIF1BO60333 1816 aa18.27■□□□□ 0.52
HLA-DQB1-203ENST00000399082 SLIT1O75093 1534 aa18.27■□□□□ 0.51
HLA-DQB1-203ENST00000399082 STRCQ7RTU9 1775 aa18.27■□□□□ 0.51
HLA-DQB1-203ENST00000399082 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
HLA-DQB1-203ENST00000399082 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
HLA-DQB1-203ENST00000399082 NEURL4Q96JN8 1562 aa18.23■□□□□ 0.51
HLA-DQB1-203ENST00000399082 TMEM2Q9UHN6 1383 aa18.23■□□□□ 0.51
HLA-DQB1-203ENST00000399082 THEMISQ8N1K5 641 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-203ENST00000399082 POLR1AO95602 1720 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-203ENST00000399082 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-203ENST00000399082 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms