RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 HSPA2P54652 639 aa21.63■■□□□ 1.05
HLA-DQB1-202ENST00000399079 PTPRKQ15262 1439 aa21.62■■□□□ 1.05
HLA-DQB1-202ENST00000399079 MROH2AA6NES4 1674 aa21.62■■□□□ 1.05
HLA-DQB1-202ENST00000399079 WASHC2CQ9Y4E1 1318 aa21.62■■□□□ 1.05
HLA-DQB1-202ENST00000399079 ITGAEP38570 1179 aa21.6■■□□□ 1.05
HLA-DQB1-202ENST00000399079 EIF2AK4Q9P2K8 1649 aaKnown RBP21.59■■□□□ 1.05
HLA-DQB1-202ENST00000399079 ERBINQ96RT1 1412 aa21.58■■□□□ 1.05
HLA-DQB1-202ENST00000399079 ADGRL2O95490 1459 aa21.58■■□□□ 1.05
HLA-DQB1-202ENST00000399079 KDM5DQ9BY66 1539 aa21.58■■□□□ 1.04
HLA-DQB1-202ENST00000399079 RNF17Q9BXT8 1623 aaKnown RBP21.58■■□□□ 1.04
HLA-DQB1-202ENST00000399079 PREX1Q8TCU6 1659 aa21.57■■□□□ 1.04
HLA-DQB1-202ENST00000399079 UHRF1BP1Q6BDS2 1440 aa21.56■■□□□ 1.04
HLA-DQB1-202ENST00000399079 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
HLA-DQB1-202ENST00000399079 MROH1Q8NDA8 1641 aa21.56■■□□□ 1.04
HLA-DQB1-202ENST00000399079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.54■■□□□ 1.04
HLA-DQB1-202ENST00000399079 NPATQ14207 1427 aa21.54■■□□□ 1.04
HLA-DQB1-202ENST00000399079 RRBP1Q9P2E9 1410 aaKnown RBP21.54■■□□□ 1.04
HLA-DQB1-202ENST00000399079 FBXO31Q5XUX0 539 aaPredicted RBP21.54■■□□□ 1.04
HLA-DQB1-202ENST00000399079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.54■■□□□ 1.04
HLA-DQB1-202ENST00000399079 FAM135AQ9P2D6 1515 aa21.52■■□□□ 1.04
HLA-DQB1-202ENST00000399079 ABCC3O15438 1527 aa21.52■■□□□ 1.03
HLA-DQB1-202ENST00000399079 PZPP20742 1482 aa21.49■■□□□ 1.03
HLA-DQB1-202ENST00000399079 ANKRD50Q9ULJ7 1429 aa21.49■■□□□ 1.03
HLA-DQB1-202ENST00000399079 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
HLA-DQB1-202ENST00000399079 PRDM15P57071 1507 aaPredicted RBP21.48■■□□□ 1.03
HLA-DQB1-202ENST00000399079 DEPDC5O75140 1603 aa21.46■■□□□ 1.03
HLA-DQB1-202ENST00000399079 CEP152O94986 1710 aa21.46■■□□□ 1.03
HLA-DQB1-202ENST00000399079 ZC3H13Q5T200 1668 aaKnown RBP21.46■■□□□ 1.03
HLA-DQB1-202ENST00000399079 KANK1Q14678 1352 aa21.44■■□□□ 1.02
HLA-DQB1-202ENST00000399079 TNRQ92752 1358 aa21.44■■□□□ 1.02
HLA-DQB1-202ENST00000399079 MYO3AQ8NEV4 1616 aa21.43■■□□□ 1.02
HLA-DQB1-202ENST00000399079 CAMSAP1Q5T5Y3 1602 aa21.42■■□□□ 1.02
HLA-DQB1-202ENST00000399079 VWDEQ8N2E2 1590 aa21.39■■□□□ 1.02
HLA-DQB1-202ENST00000399079 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.02
HLA-DQB1-202ENST00000399079 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
HLA-DQB1-202ENST00000399079 CFAP65Q6ZU64 1925 aaKnown RBP21.37■■□□□ 1.01
HLA-DQB1-202ENST00000399079 ARHGAP31Q2M1Z3 1444 aa21.36■■□□□ 1.01
HLA-DQB1-202ENST00000399079 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
HLA-DQB1-202ENST00000399079 A2ML1A8K2U0 1454 aa21.36■■□□□ 1.01
HLA-DQB1-202ENST00000399079 STRCQ7RTU9 1775 aa21.36■■□□□ 1.01
HLA-DQB1-202ENST00000399079 SPATA31D1Q6ZQQ2 1576 aa21.36■■□□□ 1.01
HLA-DQB1-202ENST00000399079 LMTK2Q8IWU2 1503 aa21.35■■□□□ 1.01
HLA-DQB1-202ENST00000399079 UNC13BO14795 1591 aa21.32■■□□□ 1
HLA-DQB1-202ENST00000399079 NLRP1Q9C000 1473 aa21.32■■□□□ 1
HLA-DQB1-202ENST00000399079 NAIPQ13075 1403 aa21.31■■□□□ 1
HLA-DQB1-202ENST00000399079 NCKAP5LQ9HCH0 1330 aa21.31■■□□□ 1
HLA-DQB1-202ENST00000399079 EFCAB6Q5THR3 1501 aa21.31■■□□□ 1
HLA-DQB1-202ENST00000399079 NUP155O75694 1391 aa21.3■■□□□ 1
HLA-DQB1-202ENST00000399079 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
HLA-DQB1-202ENST00000399079 UGGT1Q9NYU2 1555 aa21.29■■□□□ 1
HLA-DQB1-202ENST00000399079 PLA2R1Q13018 1463 aa21.27■■□□□ 1
HLA-DQB1-202ENST00000399079 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
HLA-DQB1-202ENST00000399079 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
HLA-DQB1-202ENST00000399079 TET3O43151 1660 aa21.25■□□□□ 0.99
HLA-DQB1-202ENST00000399079 IQGAP3Q86VI3 1631 aa21.24■□□□□ 0.99
HLA-DQB1-202ENST00000399079 NOS1P29475 1434 aa21.24■□□□□ 0.99
HLA-DQB1-202ENST00000399079 GCC2Q8IWJ2 1684 aa21.24■□□□□ 0.99
HLA-DQB1-202ENST00000399079 PKD2Q13563 968 aa21.24■□□□□ 0.99
HLA-DQB1-202ENST00000399079 PTPRTO14522 1441 aa21.23■□□□□ 0.99
HLA-DQB1-202ENST00000399079 IDI1Q13907 227 aa21.23■□□□□ 0.99
HLA-DQB1-202ENST00000399079 RPRD2Q5VT52 1461 aaKnown RBP21.23■□□□□ 0.99
HLA-DQB1-202ENST00000399079 SYNMO15061 1565 aa21.22■□□□□ 0.99
HLA-DQB1-202ENST00000399079 ANKLE2Q86XL3 938 aa21.19■□□□□ 0.98
HLA-DQB1-202ENST00000399079 E9PCH4 1651 aa21.19■□□□□ 0.98
HLA-DQB1-202ENST00000399079 UBR1Q8IWV7 1749 aa21.19■□□□□ 0.98
HLA-DQB1-202ENST00000399079 PIK3C2BO00750 1634 aa21.18■□□□□ 0.98
HLA-DQB1-202ENST00000399079 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
HLA-DQB1-202ENST00000399079 TRIM52Q96A61 297 aa21.17■□□□□ 0.98
HLA-DQB1-202ENST00000399079 SLC52A1Q9NWF4 448 aa21.16■□□□□ 0.98
HLA-DQB1-202ENST00000399079 NEURL4Q96JN8 1562 aa21.16■□□□□ 0.98
HLA-DQB1-202ENST00000399079 POLR1AO95602 1720 aaPredicted RBP21.13■□□□□ 0.97
HLA-DQB1-202ENST00000399079 LTKP29376 864 aa21.13■□□□□ 0.97
HLA-DQB1-202ENST00000399079 ZNF335Q9H4Z2 1342 aaPredicted RBP21.11■□□□□ 0.97
HLA-DQB1-202ENST00000399079 ARHGAP23Q9P227 1491 aa21.1■□□□□ 0.97
HLA-DQB1-202ENST00000399079 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
HLA-DQB1-202ENST00000399079 TXNDC2Q86VQ3 553 aa21.1■□□□□ 0.97
HLA-DQB1-202ENST00000399079 SLIT1O75093 1534 aa21.1■□□□□ 0.97
HLA-DQB1-202ENST00000399079 NPHP4O75161 1426 aaPredicted RBP21.1■□□□□ 0.97
HLA-DQB1-202ENST00000399079 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
HLA-DQB1-202ENST00000399079 ADGRB3O60242 1522 aa21.09■□□□□ 0.97
HLA-DQB1-202ENST00000399079 MED14O60244 1454 aa21.09■□□□□ 0.97
HLA-DQB1-202ENST00000399079 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB1-202ENST00000399079 SCAF11Q99590 1463 aaKnown RBP21.08■□□□□ 0.97
HLA-DQB1-202ENST00000399079 CHGAP10645 457 aaKnown RBP21.08■□□□□ 0.96
HLA-DQB1-202ENST00000399079 ILDR1Q86SU0 546 aaPredicted RBP21.07■□□□□ 0.96
HLA-DQB1-202ENST00000399079 EID1Q9Y6B2 187 aa21.07■□□□□ 0.96
HLA-DQB1-202ENST00000399079 SETD5Q9C0A6 1442 aa21.07■□□□□ 0.96
HLA-DQB1-202ENST00000399079 KDM5AP29375 1690 aaKnown RBP21.07■□□□□ 0.96
HLA-DQB1-202ENST00000399079 LTBP4Q8N2S1 1624 aa21.06■□□□□ 0.96
HLA-DQB1-202ENST00000399079 IQGAP1P46940 1657 aa21.04■□□□□ 0.96
HLA-DQB1-202ENST00000399079 TMEM131LA2VDJ0 1609 aa21.04■□□□□ 0.96
HLA-DQB1-202ENST00000399079 SPHKAPQ2M3C7 1700 aa21.03■□□□□ 0.96
HLA-DQB1-202ENST00000399079 FOXD1Q16676 465 aa21.03■□□□□ 0.96
HLA-DQB1-202ENST00000399079 MYO5BQ9ULV0 1848 aa21.02■□□□□ 0.96
HLA-DQB1-202ENST00000399079 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
HLA-DQB1-202ENST00000399079 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
HLA-DQB1-202ENST00000399079 FBXO41Q8TF61 875 aa20.99■□□□□ 0.95
HLA-DQB1-202ENST00000399079 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
HLA-DQB1-202ENST00000399079 ZFYVE9O95405 1425 aa20.99■□□□□ 0.95
HLA-DQB1-202ENST00000399079 NUTM2DQ5VT03 806 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms