RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.17■□□□□ 0.5
PCDHA11-201ENST00000398640 AMPHP49418 695 aa18.16■□□□□ 0.5
PCDHA11-201ENST00000398640 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
PCDHA11-201ENST00000398640 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
PCDHA11-201ENST00000398640 PLEKHH2Q8IVE3 1493 aa18.16■□□□□ 0.5
PCDHA11-201ENST00000398640 G3V3G9 751 aa18.15■□□□□ 0.5
PCDHA11-201ENST00000398640 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
PCDHA11-201ENST00000398640 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
PCDHA11-201ENST00000398640 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
PCDHA11-201ENST00000398640 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
PCDHA11-201ENST00000398640 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
PCDHA11-201ENST00000398640 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
PCDHA11-201ENST00000398640 CHMP3Q9Y3E7 222 aa18.13■□□□□ 0.49
PCDHA11-201ENST00000398640 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
PCDHA11-201ENST00000398640 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
PCDHA11-201ENST00000398640 MS4A1P11836 297 aa18.12■□□□□ 0.49
PCDHA11-201ENST00000398640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDHA11-201ENST00000398640 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
PCDHA11-201ENST00000398640 PSME1Q06323 249 aa18.12■□□□□ 0.49
PCDHA11-201ENST00000398640 THEMISQ8N1K5 641 aaPredicted RBP18.12■□□□□ 0.49
PCDHA11-201ENST00000398640 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
PCDHA11-201ENST00000398640 KIF21BO75037 1637 aa18.12■□□□□ 0.49
PCDHA11-201ENST00000398640 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
PCDHA11-201ENST00000398640 CUL7Q14999 1698 aa18.11■□□□□ 0.49
PCDHA11-201ENST00000398640 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
PCDHA11-201ENST00000398640 ZNF608Q9ULD9 1512 aaPredicted RBP18.1■□□□□ 0.49
PCDHA11-201ENST00000398640 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
PCDHA11-201ENST00000398640 SCAPERQ9BY12 1400 aa18.1■□□□□ 0.49
PCDHA11-201ENST00000398640 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
PCDHA11-201ENST00000398640 MSH5O43196 834 aa18.09■□□□□ 0.49
PCDHA11-201ENST00000398640 AMER1Q5JTC6 1135 aaPredicted RBP18.09■□□□□ 0.49
PCDHA11-201ENST00000398640 GOLGA6L6A8MZA4 724 aa18.09■□□□□ 0.49
PCDHA11-201ENST00000398640 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
PCDHA11-201ENST00000398640 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.49
PCDHA11-201ENST00000398640 KTN1Q86UP2 1357 aaKnown RBP18.07■□□□□ 0.48
PCDHA11-201ENST00000398640 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
PCDHA11-201ENST00000398640 PROSER2Q86WR7 435 aaPredicted RBP18.07■□□□□ 0.48
PCDHA11-201ENST00000398640 NAP1L5Q96NT1 182 aaPredicted RBP18.07■□□□□ 0.48
PCDHA11-201ENST00000398640 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
PCDHA11-201ENST00000398640 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
PCDHA11-201ENST00000398640 GNL2Q13823 731 aaKnown RBP18.06■□□□□ 0.48
PCDHA11-201ENST00000398640 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
PCDHA11-201ENST00000398640 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
PCDHA11-201ENST00000398640 HSCBQ8IWL3 235 aa18.05■□□□□ 0.48
PCDHA11-201ENST00000398640 U2AF1L5P0DN76 240 aaPredicted RBP18.05■□□□□ 0.48
PCDHA11-201ENST00000398640 U2AF1Q01081 240 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDHA11-201ENST00000398640 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
PCDHA11-201ENST00000398640 ANKLE2Q86XL3 938 aa18.04■□□□□ 0.48
PCDHA11-201ENST00000398640 GORABQ5T7V8 394 aa18.03■□□□□ 0.48
PCDHA11-201ENST00000398640 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
PCDHA11-201ENST00000398640 MCCP23508 829 aa18.03■□□□□ 0.48
PCDHA11-201ENST00000398640 COG3Q96JB2 828 aa18.02■□□□□ 0.48
PCDHA11-201ENST00000398640 GTF2E1P29083 439 aaPredicted RBP18.02■□□□□ 0.48
PCDHA11-201ENST00000398640 EHBP1L1Q8N3D4 1523 aa18.02■□□□□ 0.48
PCDHA11-201ENST00000398640 ANKRD50Q9ULJ7 1429 aa18.02■□□□□ 0.48
PCDHA11-201ENST00000398640 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.47
PCDHA11-201ENST00000398640 CALD1Q05682 793 aaKnown RBP18.01■□□□□ 0.47
PCDHA11-201ENST00000398640 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
PCDHA11-201ENST00000398640 DRC7Q8IY82 874 aa17.98■□□□□ 0.47
PCDHA11-201ENST00000398640 PIP4K2BP78356 416 aa17.97■□□□□ 0.47
PCDHA11-201ENST00000398640 KLHL34Q8N239 644 aa17.97■□□□□ 0.47
PCDHA11-201ENST00000398640 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
PCDHA11-201ENST00000398640 NRDCO43847 1150 aa17.97■□□□□ 0.47
PCDHA11-201ENST00000398640 FRAT2O75474 233 aaPredicted RBP17.96■□□□□ 0.47
PCDHA11-201ENST00000398640 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
PCDHA11-201ENST00000398640 ERICH6BQ5W0A0 696 aa17.95■□□□□ 0.46
PCDHA11-201ENST00000398640 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
PCDHA11-201ENST00000398640 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
PCDHA11-201ENST00000398640 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
PCDHA11-201ENST00000398640 STK31Q9BXU1 1019 aa17.94■□□□□ 0.46
PCDHA11-201ENST00000398640 PLB1Q6P1J6 1458 aa17.93■□□□□ 0.46
PCDHA11-201ENST00000398640 SLC4A10Q6U841 1118 aa17.92■□□□□ 0.46
PCDHA11-201ENST00000398640 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
PCDHA11-201ENST00000398640 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
PCDHA11-201ENST00000398640 PHLDB1Q86UU1 1377 aa17.91■□□□□ 0.46
PCDHA11-201ENST00000398640 ADGRL1O94910 1474 aa17.91■□□□□ 0.46
PCDHA11-201ENST00000398640 IPO8O15397 1037 aaKnown RBP17.91■□□□□ 0.46
PCDHA11-201ENST00000398640 GPRASP1Q5JY77 1395 aa17.91■□□□□ 0.46
PCDHA11-201ENST00000398640 CDK13Q14004 1512 aaKnown RBP17.91■□□□□ 0.46
PCDHA11-201ENST00000398640 RALBP1Q15311 655 aa17.9■□□□□ 0.46
PCDHA11-201ENST00000398640 AKNAQ7Z591 1439 aa17.9■□□□□ 0.46
PCDHA11-201ENST00000398640 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
PCDHA11-201ENST00000398640 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
PCDHA11-201ENST00000398640 KIF14Q15058 1648 aa17.89■□□□□ 0.45
PCDHA11-201ENST00000398640 TEX14Q8IWB6 1497 aa17.89■□□□□ 0.45
PCDHA11-201ENST00000398640 CGNL1Q0VF96 1302 aa17.89■□□□□ 0.45
PCDHA11-201ENST00000398640 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.45
PCDHA11-201ENST00000398640 RRBP1Q9P2E9 1410 aaKnown RBP17.88■□□□□ 0.45
PCDHA11-201ENST00000398640 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
PCDHA11-201ENST00000398640 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
PCDHA11-201ENST00000398640 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
PCDHA11-201ENST00000398640 LMOD3Q0VAK6 560 aa17.88■□□□□ 0.45
PCDHA11-201ENST00000398640 PRM3Q9NNZ6 103 aa17.88■□□□□ 0.45
PCDHA11-201ENST00000398640 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
PCDHA11-201ENST00000398640 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
PCDHA11-201ENST00000398640 NUTM2BA6NNL0 878 aaPredicted RBP17.87■□□□□ 0.45
PCDHA11-201ENST00000398640 NUTM2EB1AL46 878 aaPredicted RBP17.87■□□□□ 0.45
PCDHA11-201ENST00000398640 NUTM2AQ8IVF1 878 aaPredicted RBP17.87■□□□□ 0.45
PCDHA11-201ENST00000398640 VPS53Q5VIR6 699 aa17.87■□□□□ 0.45
PCDHA11-201ENST00000398640 DENND4BO75064 1496 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms