RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 HFM1A2PYH4 1435 aa19.64■□□□□ 0.73
CYLD-202ENST00000398568 ZNF644Q9H582 1327 aaPredicted RBP19.62■□□□□ 0.73
CYLD-202ENST00000398568 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
CYLD-202ENST00000398568 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
CYLD-202ENST00000398568 TROQ12816 1431 aaPredicted RBP19.6■□□□□ 0.73
CYLD-202ENST00000398568 PLEKHG5O94827 1062 aa19.59■□□□□ 0.73
CYLD-202ENST00000398568 CFDP1Q9UEE9 299 aaPredicted RBP19.59■□□□□ 0.73
CYLD-202ENST00000398568 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
CYLD-202ENST00000398568 KIF14Q15058 1648 aa19.57■□□□□ 0.72
CYLD-202ENST00000398568 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
CYLD-202ENST00000398568 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
CYLD-202ENST00000398568 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
CYLD-202ENST00000398568 FAM161AQ3B820 660 aa19.55■□□□□ 0.72
CYLD-202ENST00000398568 POGKQ9P215 609 aa19.54■□□□□ 0.72
CYLD-202ENST00000398568 TSPOAP1O95153 1857 aa19.54■□□□□ 0.72
CYLD-202ENST00000398568 NAIPQ13075 1403 aa19.54■□□□□ 0.72
CYLD-202ENST00000398568 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
CYLD-202ENST00000398568 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
CYLD-202ENST00000398568 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.72
CYLD-202ENST00000398568 ARXQ96QS3 562 aa19.51■□□□□ 0.71
CYLD-202ENST00000398568 CLCN1P35523 988 aa19.51■□□□□ 0.71
CYLD-202ENST00000398568 PDE3BQ13370 1112 aa19.51■□□□□ 0.71
CYLD-202ENST00000398568 CHIC2Q9UKJ5 165 aa19.51■□□□□ 0.71
CYLD-202ENST00000398568 RAPGEF3O95398 923 aa19.5■□□□□ 0.71
CYLD-202ENST00000398568 CRBNQ96SW2 442 aa19.5■□□□□ 0.71
CYLD-202ENST00000398568 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
CYLD-202ENST00000398568 RRP7BPQ9NSQ0 103 aa19.49■□□□□ 0.71
CYLD-202ENST00000398568 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
CYLD-202ENST00000398568 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
CYLD-202ENST00000398568 PLIN1O60240 522 aa19.47■□□□□ 0.71
CYLD-202ENST00000398568 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
CYLD-202ENST00000398568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
CYLD-202ENST00000398568 TTC37Q6PGP7 1564 aa19.47■□□□□ 0.71
CYLD-202ENST00000398568 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
CYLD-202ENST00000398568 KTN1Q86UP2 1357 aaKnown RBP19.46■□□□□ 0.71
CYLD-202ENST00000398568 GOLGA6L3A6NEY3 463 aa19.46■□□□□ 0.71
CYLD-202ENST00000398568 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
CYLD-202ENST00000398568 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
CYLD-202ENST00000398568 BECN1Q14457 450 aa19.44■□□□□ 0.7
CYLD-202ENST00000398568 CENPQQ7L2Z9 268 aaPredicted RBP19.44■□□□□ 0.7
CYLD-202ENST00000398568 MPHOSPH9Q99550 1183 aa19.44■□□□□ 0.7
CYLD-202ENST00000398568 ARHGAP5Q13017 1502 aa19.44■□□□□ 0.7
CYLD-202ENST00000398568 DIP2BQ9P265 1576 aa19.42■□□□□ 0.7
CYLD-202ENST00000398568 C8orf34Q49A92 452 aa19.42■□□□□ 0.7
CYLD-202ENST00000398568 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
CYLD-202ENST00000398568 SPATA31E1Q6ZUB1 1445 aa19.4■□□□□ 0.7
CYLD-202ENST00000398568 RGS3P49796 1198 aa19.39■□□□□ 0.7
CYLD-202ENST00000398568 FOXD1Q16676 465 aa19.39■□□□□ 0.69
CYLD-202ENST00000398568 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
CYLD-202ENST00000398568 BRD4O60885 1362 aaPredicted RBP19.39■□□□□ 0.69
CYLD-202ENST00000398568 SUPT6HQ7KZ85 1726 aaKnown RBP19.39■□□□□ 0.69
CYLD-202ENST00000398568 XRCC6P12956 609 aaKnown RBP eCLIP19.38■□□□□ 0.69
CYLD-202ENST00000398568 SLKQ9H2G2 1235 aaPredicted RBP19.38■□□□□ 0.69
CYLD-202ENST00000398568 FANCAO15360 1455 aa19.38■□□□□ 0.69
CYLD-202ENST00000398568 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
CYLD-202ENST00000398568 MYOM3Q5VTT5 1437 aa19.37■□□□□ 0.69
CYLD-202ENST00000398568 PLCH2O75038 1416 aa19.36■□□□□ 0.69
CYLD-202ENST00000398568 KIF15Q9NS87 1388 aa19.36■□□□□ 0.69
CYLD-202ENST00000398568 RALBP1Q15311 655 aa19.35■□□□□ 0.69
CYLD-202ENST00000398568 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
CYLD-202ENST00000398568 MIA2Q96PC5 1412 aa19.35■□□□□ 0.69
CYLD-202ENST00000398568 PDCL3Q9H2J4 239 aa19.35■□□□□ 0.69
CYLD-202ENST00000398568 KIF13AQ9H1H9 1805 aa19.34■□□□□ 0.69
CYLD-202ENST00000398568 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
CYLD-202ENST00000398568 ARID4BQ4LE39 1312 aaPredicted RBP19.34■□□□□ 0.69
CYLD-202ENST00000398568 TPM2P07951 284 aa19.34■□□□□ 0.69
CYLD-202ENST00000398568 SCAPERQ9BY12 1400 aa19.34■□□□□ 0.69
CYLD-202ENST00000398568 KDM2BQ8NHM5 1336 aa19.34■□□□□ 0.69
CYLD-202ENST00000398568 POLR1AO95602 1720 aaPredicted RBP19.33■□□□□ 0.68
CYLD-202ENST00000398568 ZNF326Q5BKZ1 582 aaKnown RBP19.32■□□□□ 0.68
CYLD-202ENST00000398568 A0A0U1RQG5 324 aaPredicted RBP19.32■□□□□ 0.68
CYLD-202ENST00000398568 SLC24A1O60721 1099 aa19.31■□□□□ 0.68
CYLD-202ENST00000398568 GZF1Q9H116 711 aaPredicted RBP19.31■□□□□ 0.68
CYLD-202ENST00000398568 TRIM44Q96DX7 344 aaPredicted RBP19.3■□□□□ 0.68
CYLD-202ENST00000398568 PANK2Q9BZ23 570 aa19.3■□□□□ 0.68
CYLD-202ENST00000398568 MYH16Q9H6N6 1097 aa19.3■□□□□ 0.68
CYLD-202ENST00000398568 ESPNB1AK53 854 aa19.3■□□□□ 0.68
CYLD-202ENST00000398568 USP47Q96K76 1375 aa19.3■□□□□ 0.68
CYLD-202ENST00000398568 ADGRL1O94910 1474 aa19.29■□□□□ 0.68
CYLD-202ENST00000398568 TSPY4P0CV99 314 aa19.29■□□□□ 0.68
CYLD-202ENST00000398568 TSPY10P0CW01 314 aa19.29■□□□□ 0.68
CYLD-202ENST00000398568 ABCA9Q8IUA7 1624 aa19.29■□□□□ 0.68
CYLD-202ENST00000398568 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
CYLD-202ENST00000398568 COL17A1Q9UMD9 1497 aaPredicted RBP19.28■□□□□ 0.68
CYLD-202ENST00000398568 MRE11P49959 708 aa19.28■□□□□ 0.68
CYLD-202ENST00000398568 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
CYLD-202ENST00000398568 CDC42BPAQ5VT25 1732 aa19.28■□□□□ 0.68
CYLD-202ENST00000398568 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
CYLD-202ENST00000398568 DENND4BO75064 1496 aaPredicted RBP19.27■□□□□ 0.68
CYLD-202ENST00000398568 TRAPPC8Q9Y2L5 1435 aa19.27■□□□□ 0.68
CYLD-202ENST00000398568 FSD2A1L4K1 749 aa19.27■□□□□ 0.68
CYLD-202ENST00000398568 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.68
CYLD-202ENST00000398568 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
CYLD-202ENST00000398568 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.67
CYLD-202ENST00000398568 CENPJQ9HC77 1338 aaPredicted RBP19.26■□□□□ 0.67
CYLD-202ENST00000398568 MLECQ14165 292 aa19.26■□□□□ 0.67
CYLD-202ENST00000398568 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
CYLD-202ENST00000398568 CDC42BPBQ9Y5S2 1711 aa19.26■□□□□ 0.67
CYLD-202ENST00000398568 CAMSAP2Q08AD1 1489 aa19.26■□□□□ 0.67
CYLD-202ENST00000398568 MYO5CQ9NQX4 1742 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms