RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 ERBINQ96RT1 1412 aa26.81■■□□□ 1.88
MBD1-208ENST00000398493 GGT6Q6P531 493 aa26.79■■□□□ 1.88
MBD1-208ENST00000398493 GCC2Q8IWJ2 1684 aa26.73■■□□□ 1.87
MBD1-208ENST00000398493 EIF2AK4Q9P2K8 1649 aaKnown RBP26.71■■□□□ 1.87
MBD1-208ENST00000398493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.71■■□□□ 1.87
MBD1-208ENST00000398493 BCORL1Q5H9F3 1711 aa26.7■■□□□ 1.86
MBD1-208ENST00000398493 MROH1Q8NDA8 1641 aa26.67■■□□□ 1.86
MBD1-208ENST00000398493 ZNF316A6NFI3 1004 aaPredicted RBP26.66■■□□□ 1.86
MBD1-208ENST00000398493 KDM4FA0A1W2PPD8 638 aa26.65■■□□□ 1.86
MBD1-208ENST00000398493 RNF17Q9BXT8 1623 aaKnown RBP26.65■■□□□ 1.86
MBD1-208ENST00000398493 DEPDC5O75140 1603 aa26.62■■□□□ 1.85
MBD1-208ENST00000398493 WASHC2CQ9Y4E1 1318 aa26.61■■□□□ 1.85
MBD1-208ENST00000398493 PRDM15P57071 1507 aaPredicted RBP26.61■■□□□ 1.85
MBD1-208ENST00000398493 ADAMTSL3P82987 1691 aa26.61■■□□□ 1.85
MBD1-208ENST00000398493 NUP155O75694 1391 aa26.6■■□□□ 1.85
MBD1-208ENST00000398493 TRIM52Q96A61 297 aa26.59■■□□□ 1.85
MBD1-208ENST00000398493 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
MBD1-208ENST00000398493 UNC13BO14795 1591 aa26.59■■□□□ 1.85
MBD1-208ENST00000398493 MADDQ8WXG6 1647 aa26.58■■□□□ 1.85
MBD1-208ENST00000398493 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.84
MBD1-208ENST00000398493 VWDEQ8N2E2 1590 aa26.56■■□□□ 1.84
MBD1-208ENST00000398493 ESF1Q9H501 851 aaKnown RBP26.55■■□□□ 1.84
MBD1-208ENST00000398493 KANK1Q14678 1352 aa26.55■■□□□ 1.84
MBD1-208ENST00000398493 ABCC3O15438 1527 aa26.55■■□□□ 1.84
MBD1-208ENST00000398493 KDM5DQ9BY66 1539 aa26.54■■□□□ 1.84
MBD1-208ENST00000398493 ACIN1Q9UKV3 1341 aaKnown RBP26.53■■□□□ 1.84
MBD1-208ENST00000398493 CEBPAP49715 358 aaPredicted RBP26.52■■□□□ 1.84
MBD1-208ENST00000398493 FER1L4A9Z1Z3 1794 aa26.52■■□□□ 1.84
MBD1-208ENST00000398493 CLTCQ00610 1675 aaKnown RBP26.52■■□□□ 1.84
MBD1-208ENST00000398493 DIEXFQ68CQ4 756 aaKnown RBP26.51■■□□□ 1.83
MBD1-208ENST00000398493 ZMYM3Q14202 1370 aa26.51■■□□□ 1.83
MBD1-208ENST00000398493 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
MBD1-208ENST00000398493 CEP152O94986 1710 aa26.5■■□□□ 1.83
MBD1-208ENST00000398493 FAM135AQ9P2D6 1515 aa26.49■■□□□ 1.83
MBD1-208ENST00000398493 PZPP20742 1482 aa26.49■■□□□ 1.83
MBD1-208ENST00000398493 RIMS1Q86UR5 1692 aaKnown RBP26.49■■□□□ 1.83
MBD1-208ENST00000398493 CNTLNQ9NXG0 1405 aa26.49■■□□□ 1.83
MBD1-208ENST00000398493 TIMELESSQ9UNS1 1208 aa26.49■■□□□ 1.83
MBD1-208ENST00000398493 LMTK2Q8IWU2 1503 aa26.48■■□□□ 1.83
MBD1-208ENST00000398493 IQGAP3Q86VI3 1631 aa26.48■■□□□ 1.83
MBD1-208ENST00000398493 SLC4A1APQ9BWU0 796 aaKnown RBP26.46■■□□□ 1.83
MBD1-208ENST00000398493 PTPRMP28827 1452 aa26.46■■□□□ 1.83
MBD1-208ENST00000398493 MPHOSPH9Q99550 1183 aa26.45■■□□□ 1.82
MBD1-208ENST00000398493 FBXO31Q5XUX0 539 aaPredicted RBP26.44■■□□□ 1.82
MBD1-208ENST00000398493 ZC3H13Q5T200 1668 aaKnown RBP26.44■■□□□ 1.82
MBD1-208ENST00000398493 NPATQ14207 1427 aa26.43■■□□□ 1.82
MBD1-208ENST00000398493 CAMSAP1Q5T5Y3 1602 aa26.42■■□□□ 1.82
MBD1-208ENST00000398493 PKD2Q13563 968 aa26.41■■□□□ 1.82
MBD1-208ENST00000398493 FOXD1Q16676 465 aa26.41■■□□□ 1.82
MBD1-208ENST00000398493 ARHGAP31Q2M1Z3 1444 aa26.4■■□□□ 1.82
MBD1-208ENST00000398493 EFCAB6Q5THR3 1501 aa26.4■■□□□ 1.82
MBD1-208ENST00000398493 MROH2AA6NES4 1674 aa26.39■■□□□ 1.82
MBD1-208ENST00000398493 TET3O43151 1660 aa26.39■■□□□ 1.81
MBD1-208ENST00000398493 C3P01024 1663 aa26.39■■□□□ 1.81
MBD1-208ENST00000398493 NEUROD1Q13562 356 aa26.38■■□□□ 1.81
MBD1-208ENST00000398493 SIN3AQ96ST3 1273 aa26.37■■□□□ 1.81
MBD1-208ENST00000398493 E9PCH4 1651 aa26.35■■□□□ 1.81
MBD1-208ENST00000398493 CFAP65Q6ZU64 1925 aaKnown RBP26.32■■□□□ 1.8
MBD1-208ENST00000398493 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
MBD1-208ENST00000398493 RPRD2Q5VT52 1461 aaKnown RBP26.3■■□□□ 1.8
MBD1-208ENST00000398493 NOS1P29475 1434 aa26.29■■□□□ 1.8
MBD1-208ENST00000398493 PLA2R1Q13018 1463 aa26.27■■□□□ 1.8
MBD1-208ENST00000398493 SPATA31D1Q6ZQQ2 1576 aa26.26■■□□□ 1.8
MBD1-208ENST00000398493 PREX1Q8TCU6 1659 aa26.26■■□□□ 1.79
MBD1-208ENST00000398493 TNRQ92752 1358 aa26.25■■□□□ 1.79
MBD1-208ENST00000398493 PTPRTO14522 1441 aa26.25■■□□□ 1.79
MBD1-208ENST00000398493 SYNMO15061 1565 aa26.22■■□□□ 1.79
MBD1-208ENST00000398493 TONSLQ96HA7 1378 aa26.22■■□□□ 1.79
MBD1-208ENST00000398493 UGGT1Q9NYU2 1555 aa26.21■■□□□ 1.79
MBD1-208ENST00000398493 PPP1R15AO75807 674 aaPredicted RBP26.2■■□□□ 1.78
MBD1-208ENST00000398493 IDI1Q13907 227 aa26.2■■□□□ 1.78
MBD1-208ENST00000398493 ANKRD30BQ9BXX2 1392 aa26.18■■□□□ 1.78
MBD1-208ENST00000398493 SPHKAPQ2M3C7 1700 aa26.16■■□□□ 1.78
MBD1-208ENST00000398493 TRPM2O94759 1503 aa26.15■■□□□ 1.78
MBD1-208ENST00000398493 SLC52A1Q9NWF4 448 aa26.15■■□□□ 1.78
MBD1-208ENST00000398493 SETD1BQ9UPS6 1966 aaKnown RBP26.14■■□□□ 1.78
MBD1-208ENST00000398493 MYO3AQ8NEV4 1616 aa26.11■■□□□ 1.77
MBD1-208ENST00000398493 NLRP1Q9C000 1473 aa26.11■■□□□ 1.77
MBD1-208ENST00000398493 CLTCL1P53675 1640 aa26.1■■□□□ 1.77
MBD1-208ENST00000398493 PIK3C2BO00750 1634 aa26.1■■□□□ 1.77
MBD1-208ENST00000398493 UHRF1BP1Q6BDS2 1440 aa26.1■■□□□ 1.77
MBD1-208ENST00000398493 CCDC144AA2RUR9 1427 aa26.09■■□□□ 1.77
MBD1-208ENST00000398493 CHGAP10645 457 aaKnown RBP26.07■■□□□ 1.76
MBD1-208ENST00000398493 A2ML1A8K2U0 1454 aa26.07■■□□□ 1.76
MBD1-208ENST00000398493 LMTK3Q96Q04 1460 aa26.06■■□□□ 1.76
MBD1-208ENST00000398493 CEP170BQ9Y4F5 1589 aaPredicted RBP26.06■■□□□ 1.76
MBD1-208ENST00000398493 HSPA2P54652 639 aa26.04■■□□□ 1.76
MBD1-208ENST00000398493 STAG3Q9UJ98 1225 aa26.04■■□□□ 1.76
MBD1-208ENST00000398493 ZNF142P52746 1687 aaPredicted RBP26■■□□□ 1.75
MBD1-208ENST00000398493 TMEM131LA2VDJ0 1609 aa25.99■■□□□ 1.75
MBD1-208ENST00000398493 ADGRB3O60242 1522 aa25.99■■□□□ 1.75
MBD1-208ENST00000398493 UBR1Q8IWV7 1749 aa25.98■■□□□ 1.75
MBD1-208ENST00000398493 RGL3Q3MIN7 710 aa25.98■■□□□ 1.75
MBD1-208ENST00000398493 THEMISQ8N1K5 641 aaPredicted RBP25.98■■□□□ 1.75
MBD1-208ENST00000398493 SPATA31E1Q6ZUB1 1445 aa25.97■■□□□ 1.75
MBD1-208ENST00000398493 MIER1Q8N108 512 aa25.97■■□□□ 1.75
MBD1-208ENST00000398493 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
MBD1-208ENST00000398493 MYO5BQ9ULV0 1848 aa25.94■■□□□ 1.74
MBD1-208ENST00000398493 NUTM2DQ5VT03 806 aaPredicted RBP25.93■■□□□ 1.74
MBD1-208ENST00000398493 TMEM2Q9UHN6 1383 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms