RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 RNF17Q9BXT8 1623 aaKnown RBP19.31■□□□□ 0.68
KRT40-202ENST00000398486 PZPP20742 1482 aa19.3■□□□□ 0.68
KRT40-202ENST00000398486 PRDM15P57071 1507 aaPredicted RBP19.28■□□□□ 0.68
KRT40-202ENST00000398486 IQGAP3Q86VI3 1631 aa19.28■□□□□ 0.68
KRT40-202ENST00000398486 ATP10AO60312 1499 aa19.27■□□□□ 0.68
KRT40-202ENST00000398486 VWDEQ8N2E2 1590 aa19.26■□□□□ 0.67
KRT40-202ENST00000398486 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
KRT40-202ENST00000398486 AGLP35573 1532 aa19.23■□□□□ 0.67
KRT40-202ENST00000398486 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
KRT40-202ENST00000398486 NUP155O75694 1391 aa19.21■□□□□ 0.67
KRT40-202ENST00000398486 KIF3BO15066 747 aa19.21■□□□□ 0.67
KRT40-202ENST00000398486 CEP152O94986 1710 aa19.2■□□□□ 0.66
KRT40-202ENST00000398486 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
KRT40-202ENST00000398486 ACIN1Q9UKV3 1341 aaKnown RBP19.17■□□□□ 0.66
KRT40-202ENST00000398486 MPHOSPH9Q99550 1183 aa19.17■□□□□ 0.66
KRT40-202ENST00000398486 TET3O43151 1660 aa19.17■□□□□ 0.66
KRT40-202ENST00000398486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
KRT40-202ENST00000398486 E9PCH4 1651 aa19.15■□□□□ 0.66
KRT40-202ENST00000398486 ABCC3O15438 1527 aa19.15■□□□□ 0.66
KRT40-202ENST00000398486 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
KRT40-202ENST00000398486 ZC3H13Q5T200 1668 aaKnown RBP19.14■□□□□ 0.65
KRT40-202ENST00000398486 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
KRT40-202ENST00000398486 EFCAB6Q5THR3 1501 aa19.13■□□□□ 0.65
KRT40-202ENST00000398486 FOXD1Q16676 465 aa19.11■□□□□ 0.65
KRT40-202ENST00000398486 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
KRT40-202ENST00000398486 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
KRT40-202ENST00000398486 GGT6Q6P531 493 aa19.1■□□□□ 0.65
KRT40-202ENST00000398486 KANK1Q14678 1352 aa19.09■□□□□ 0.65
KRT40-202ENST00000398486 PKD2Q13563 968 aa19.09■□□□□ 0.65
KRT40-202ENST00000398486 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.64
KRT40-202ENST00000398486 CLTCQ00610 1675 aaKnown RBP19.07■□□□□ 0.64
KRT40-202ENST00000398486 SPHKAPQ2M3C7 1700 aa19.06■□□□□ 0.64
KRT40-202ENST00000398486 PLA2R1Q13018 1463 aa19.06■□□□□ 0.64
KRT40-202ENST00000398486 CFAP65Q6ZU64 1925 aaKnown RBP19.04■□□□□ 0.64
KRT40-202ENST00000398486 NPATQ14207 1427 aa19.03■□□□□ 0.64
KRT40-202ENST00000398486 SIN3AQ96ST3 1273 aa19.01■□□□□ 0.63
KRT40-202ENST00000398486 FER1L4A9Z1Z3 1794 aa19.01■□□□□ 0.63
KRT40-202ENST00000398486 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
KRT40-202ENST00000398486 TRPM2O94759 1503 aa19.01■□□□□ 0.63
KRT40-202ENST00000398486 MLECQ14165 292 aa19.01■□□□□ 0.63
KRT40-202ENST00000398486 RPRD2Q5VT52 1461 aaKnown RBP19■□□□□ 0.63
KRT40-202ENST00000398486 ARID4BQ4LE39 1312 aaPredicted RBP18.99■□□□□ 0.63
KRT40-202ENST00000398486 PTPRTO14522 1441 aa18.99■□□□□ 0.63
KRT40-202ENST00000398486 ARHGAP31Q2M1Z3 1444 aa18.99■□□□□ 0.63
KRT40-202ENST00000398486 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
KRT40-202ENST00000398486 MROH2AA6NES4 1674 aa18.98■□□□□ 0.63
KRT40-202ENST00000398486 PREX1Q8TCU6 1659 aa18.98■□□□□ 0.63
KRT40-202ENST00000398486 CLTCL1P53675 1640 aa18.97■□□□□ 0.63
KRT40-202ENST00000398486 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
KRT40-202ENST00000398486 SYNMO15061 1565 aa18.96■□□□□ 0.63
KRT40-202ENST00000398486 MADDQ8WXG6 1647 aa18.96■□□□□ 0.63
KRT40-202ENST00000398486 ADAMTSL3P82987 1691 aa18.96■□□□□ 0.63
KRT40-202ENST00000398486 UGGT1Q9NYU2 1555 aa18.96■□□□□ 0.63
KRT40-202ENST00000398486 NOS1P29475 1434 aa18.93■□□□□ 0.62
KRT40-202ENST00000398486 PIK3C2BO00750 1634 aa18.93■□□□□ 0.62
KRT40-202ENST00000398486 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
KRT40-202ENST00000398486 C3P01024 1663 aa18.92■□□□□ 0.62
KRT40-202ENST00000398486 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
KRT40-202ENST00000398486 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
KRT40-202ENST00000398486 SPATA31D1Q6ZQQ2 1576 aa18.91■□□□□ 0.62
KRT40-202ENST00000398486 CCDC144AA2RUR9 1427 aa18.91■□□□□ 0.62
KRT40-202ENST00000398486 RIMS1Q86UR5 1692 aaKnown RBP18.91■□□□□ 0.62
KRT40-202ENST00000398486 ZMYM3Q14202 1370 aa18.88■□□□□ 0.61
KRT40-202ENST00000398486 KIF1BO60333 1816 aa18.86■□□□□ 0.61
KRT40-202ENST00000398486 FBXO31Q5XUX0 539 aaPredicted RBP18.86■□□□□ 0.61
KRT40-202ENST00000398486 SPATA31E1Q6ZUB1 1445 aa18.85■□□□□ 0.61
KRT40-202ENST00000398486 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
KRT40-202ENST00000398486 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.61
KRT40-202ENST00000398486 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.61
KRT40-202ENST00000398486 TONSLQ96HA7 1378 aa18.83■□□□□ 0.6
KRT40-202ENST00000398486 ESF1Q9H501 851 aaKnown RBP18.83■□□□□ 0.6
KRT40-202ENST00000398486 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
KRT40-202ENST00000398486 TMEM131LA2VDJ0 1609 aa18.79■□□□□ 0.6
KRT40-202ENST00000398486 L3MBTL2Q969R5 705 aa18.78■□□□□ 0.6
KRT40-202ENST00000398486 TIMELESSQ9UNS1 1208 aa18.78■□□□□ 0.6
KRT40-202ENST00000398486 CEBPAP49715 358 aaPredicted RBP18.78■□□□□ 0.6
KRT40-202ENST00000398486 MYO3AQ8NEV4 1616 aa18.75■□□□□ 0.59
KRT40-202ENST00000398486 TNRQ92752 1358 aa18.75■□□□□ 0.59
KRT40-202ENST00000398486 IDI1Q13907 227 aa18.75■□□□□ 0.59
KRT40-202ENST00000398486 PPLO60437 1756 aa18.75■□□□□ 0.59
KRT40-202ENST00000398486 PTPRMP28827 1452 aa18.74■□□□□ 0.59
KRT40-202ENST00000398486 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
KRT40-202ENST00000398486 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
KRT40-202ENST00000398486 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
KRT40-202ENST00000398486 SLC52A1Q9NWF4 448 aa18.73■□□□□ 0.59
KRT40-202ENST00000398486 RGL3Q3MIN7 710 aa18.72■□□□□ 0.59
KRT40-202ENST00000398486 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
KRT40-202ENST00000398486 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
KRT40-202ENST00000398486 NLRP1Q9C000 1473 aa18.7■□□□□ 0.58
KRT40-202ENST00000398486 UHRF1BP1Q6BDS2 1440 aa18.69■□□□□ 0.58
KRT40-202ENST00000398486 ZNF142P52746 1687 aaPredicted RBP18.68■□□□□ 0.58
KRT40-202ENST00000398486 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
KRT40-202ENST00000398486 MYOM2P54296 1465 aa18.67■□□□□ 0.58
KRT40-202ENST00000398486 SETD1BQ9UPS6 1966 aaKnown RBP18.67■□□□□ 0.58
KRT40-202ENST00000398486 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
KRT40-202ENST00000398486 PRAG1Q86YV5 1406 aa18.66■□□□□ 0.58
KRT40-202ENST00000398486 KDM4FA0A1W2PPD8 638 aa18.66■□□□□ 0.58
KRT40-202ENST00000398486 NBPF8Q3BBV2 869 aa18.66■□□□□ 0.58
KRT40-202ENST00000398486 TRPM1Q7Z4N2 1603 aa18.66■□□□□ 0.58
KRT40-202ENST00000398486 CHGAP10645 457 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms