RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
PPME1-202ENST00000398427 RNF17Q9BXT8 1623 aaKnown RBP17.02■□□□□ 0.32
PPME1-202ENST00000398427 KIF3BO15066 747 aa17.02■□□□□ 0.32
PPME1-202ENST00000398427 UNC13BO14795 1591 aa17.02■□□□□ 0.32
PPME1-202ENST00000398427 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.31
PPME1-202ENST00000398427 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
PPME1-202ENST00000398427 ARID4BQ4LE39 1312 aaPredicted RBP16.97■□□□□ 0.31
PPME1-202ENST00000398427 GGT6Q6P531 493 aa16.96■□□□□ 0.31
PPME1-202ENST00000398427 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
PPME1-202ENST00000398427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.31e-9■■■■□ 19.6
PPME1-202ENST00000398427 VWDEQ8N2E2 1590 aa16.95■□□□□ 0.3
PPME1-202ENST00000398427 IQGAP3Q86VI3 1631 aa16.94■□□□□ 0.3
PPME1-202ENST00000398427 NUP155O75694 1391 aa16.94■□□□□ 0.3
PPME1-202ENST00000398427 MLECQ14165 292 aa16.94■□□□□ 0.3
PPME1-202ENST00000398427 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
PPME1-202ENST00000398427 CEP152O94986 1710 aa16.93■□□□□ 0.3
PPME1-202ENST00000398427 FAM135AQ9P2D6 1515 aa16.92■□□□□ 0.3
PPME1-202ENST00000398427 PZPP20742 1482 aa16.92■□□□□ 0.3
PPME1-202ENST00000398427 ABCC3O15438 1527 aa16.91■□□□□ 0.3
PPME1-202ENST00000398427 ZC3H13Q5T200 1668 aaKnown RBP16.9■□□□□ 0.3
PPME1-202ENST00000398427 KANK1Q14678 1352 aa16.9■□□□□ 0.3
PPME1-202ENST00000398427 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
PPME1-202ENST00000398427 CLTCQ00610 1675 aaKnown RBP16.89■□□□□ 0.29
PPME1-202ENST00000398427 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
PPME1-202ENST00000398427 FER1L4A9Z1Z3 1794 aa16.88■□□□□ 0.29
PPME1-202ENST00000398427 TET3O43151 1660 aa16.88■□□□□ 0.29
PPME1-202ENST00000398427 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
PPME1-202ENST00000398427 ADAMTSL3P82987 1691 aa16.87■□□□□ 0.29
PPME1-202ENST00000398427 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
PPME1-202ENST00000398427 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
PPME1-202ENST00000398427 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
PPME1-202ENST00000398427 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
PPME1-202ENST00000398427 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
PPME1-202ENST00000398427 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
PPME1-202ENST00000398427 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
PPME1-202ENST00000398427 E9PCH4 1651 aa16.84■□□□□ 0.29
PPME1-202ENST00000398427 MROH2AA6NES4 1674 aa16.83■□□□□ 0.28
PPME1-202ENST00000398427 RIMS1Q86UR5 1692 aaKnown RBP16.82■□□□□ 0.28
PPME1-202ENST00000398427 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
PPME1-202ENST00000398427 PKD2Q13563 968 aa16.81■□□□□ 0.28
PPME1-202ENST00000398427 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
PPME1-202ENST00000398427 NPATQ14207 1427 aa16.81■□□□□ 0.28
PPME1-202ENST00000398427 FOXD1Q16676 465 aa16.8■□□□□ 0.28
PPME1-202ENST00000398427 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
PPME1-202ENST00000398427 C3P01024 1663 aa16.79■□□□□ 0.28
PPME1-202ENST00000398427 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
PPME1-202ENST00000398427 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
PPME1-202ENST00000398427 RPRD2Q5VT52 1461 aaKnown RBP16.78■□□□□ 0.28
PPME1-202ENST00000398427 SPHKAPQ2M3C7 1700 aa16.76■□□□□ 0.27
PPME1-202ENST00000398427 PREX1Q8TCU6 1659 aa16.76■□□□□ 0.27
PPME1-202ENST00000398427 PLA2R1Q13018 1463 aa16.74■□□□□ 0.27
PPME1-202ENST00000398427 KDM4FA0A1W2PPD8 638 aa16.74■□□□□ 0.27
PPME1-202ENST00000398427 CEBPAP49715 358 aaPredicted RBP16.73■□□□□ 0.27
PPME1-202ENST00000398427 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
PPME1-202ENST00000398427 PTPRTO14522 1441 aa16.73■□□□□ 0.27
PPME1-202ENST00000398427 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
PPME1-202ENST00000398427 ANKRD30BQ9BXX2 1392 aa16.72■□□□□ 0.27
PPME1-202ENST00000398427 SPATA31D1Q6ZQQ2 1576 aa16.72■□□□□ 0.27
PPME1-202ENST00000398427 NOS1P29475 1434 aa16.72■□□□□ 0.27
PPME1-202ENST00000398427 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
PPME1-202ENST00000398427 PTPRMP28827 1452 aa16.72■□□□□ 0.27
PPME1-202ENST00000398427 SYNMO15061 1565 aa16.72■□□□□ 0.27
PPME1-202ENST00000398427 TRPM2O94759 1503 aa16.72■□□□□ 0.27
PPME1-202ENST00000398427 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
PPME1-202ENST00000398427 UGGT1Q9NYU2 1555 aa16.69■□□□□ 0.26
PPME1-202ENST00000398427 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
PPME1-202ENST00000398427 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
PPME1-202ENST00000398427 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
PPME1-202ENST00000398427 TNRQ92752 1358 aa16.65■□□□□ 0.26
PPME1-202ENST00000398427 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
PPME1-202ENST00000398427 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
PPME1-202ENST00000398427 MYO3AQ8NEV4 1616 aa16.62■□□□□ 0.25
PPME1-202ENST00000398427 IDI1Q13907 227 aa16.61■□□□□ 0.25
PPME1-202ENST00000398427 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
PPME1-202ENST00000398427 KIF1BO60333 1816 aa16.6■□□□□ 0.25
PPME1-202ENST00000398427 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
PPME1-202ENST00000398427 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
PPME1-202ENST00000398427 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
PPME1-202ENST00000398427 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
PPME1-202ENST00000398427 ADGRB3O60242 1522 aa16.58■□□□□ 0.24
PPME1-202ENST00000398427 TMEM131LA2VDJ0 1609 aa16.58■□□□□ 0.24
PPME1-202ENST00000398427 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
PPME1-202ENST00000398427 ZNF142P52746 1687 aaPredicted RBP16.57■□□□□ 0.24
PPME1-202ENST00000398427 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
PPME1-202ENST00000398427 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
PPME1-202ENST00000398427 KDM5AP29375 1690 aaKnown RBP16.55■□□□□ 0.24
PPME1-202ENST00000398427 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
PPME1-202ENST00000398427 A2ML1A8K2U0 1454 aa16.55■□□□□ 0.24
PPME1-202ENST00000398427 CHGAP10645 457 aaKnown RBP16.54■□□□□ 0.24
PPME1-202ENST00000398427 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
PPME1-202ENST00000398427 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
PPME1-202ENST00000398427 RGL3Q3MIN7 710 aa16.52■□□□□ 0.23
PPME1-202ENST00000398427 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
PPME1-202ENST00000398427 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
PPME1-202ENST00000398427 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
PPME1-202ENST00000398427 NEXMIFQ5QGS0 1516 aa16.48■□□□□ 0.23
PPME1-202ENST00000398427 PPLO60437 1756 aa16.48■□□□□ 0.23
PPME1-202ENST00000398427 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
PPME1-202ENST00000398427 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
PPME1-202ENST00000398427 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms