RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 RNF17Q9BXT8 1623 aaKnown RBP38.36■■■■□ 3.73
TMEM55B-202ENST00000398020 PLPPR3Q6T4P5 718 aa38.35■■■■□ 3.73
TMEM55B-202ENST00000398020 AEBP2Q6ZN18 517 aaPredicted RBP38.32■■■■□ 3.72
TMEM55B-202ENST00000398020 MROH1Q8NDA8 1641 aa38.31■■■■□ 3.72
TMEM55B-202ENST00000398020 CLTCQ00610 1675 aaKnown RBP38.31■■■■□ 3.72
TMEM55B-202ENST00000398020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.28■■■■□ 3.72
TMEM55B-202ENST00000398020 NAIPQ13075 1403 aa38.26■■■■□ 3.72
TMEM55B-202ENST00000398020 CEBPAP49715 358 aaPredicted RBP38.26■■■■□ 3.71
TMEM55B-202ENST00000398020 PPP6R1Q9UPN7 881 aa38.26■■■■□ 3.71
TMEM55B-202ENST00000398020 WASHC2CQ9Y4E1 1318 aa38.26■■■■□ 3.71
TMEM55B-202ENST00000398020 CNTLNQ9NXG0 1405 aa38.26■■■■□ 3.71
TMEM55B-202ENST00000398020 DEPDC5O75140 1603 aa38.25■■■■□ 3.71
TMEM55B-202ENST00000398020 GCC2Q8IWJ2 1684 aa38.24■■■■□ 3.71
TMEM55B-202ENST00000398020 KDM5DQ9BY66 1539 aa38.24■■■■□ 3.71
TMEM55B-202ENST00000398020 PRDM15P57071 1507 aaPredicted RBP38.23■■■■□ 3.71
TMEM55B-202ENST00000398020 HFM1A2PYH4 1435 aa38.23■■■■□ 3.71
TMEM55B-202ENST00000398020 C3P01024 1663 aa38.2■■■■□ 3.7
TMEM55B-202ENST00000398020 MROH2AA6NES4 1674 aa38.19■■■■□ 3.7
TMEM55B-202ENST00000398020 ZMYM3Q14202 1370 aa38.19■■■■□ 3.7
TMEM55B-202ENST00000398020 ABCC3O15438 1527 aa38.18■■■■□ 3.7
TMEM55B-202ENST00000398020 CEP152O94986 1710 aa38.17■■■■□ 3.7
TMEM55B-202ENST00000398020 FAM135AQ9P2D6 1515 aa38.16■■■■□ 3.7
TMEM55B-202ENST00000398020 ZC3H13Q5T200 1668 aaKnown RBP38.14■■■■□ 3.7
TMEM55B-202ENST00000398020 KANK1Q14678 1352 aa38.14■■■■□ 3.7
TMEM55B-202ENST00000398020 UNC13BO14795 1591 aa38.12■■■■□ 3.69
TMEM55B-202ENST00000398020 VWDEQ8N2E2 1590 aa38.09■■■■□ 3.69
TMEM55B-202ENST00000398020 CAMSAP1Q5T5Y3 1602 aa38.06■■■■□ 3.68
TMEM55B-202ENST00000398020 NUP155O75694 1391 aa38.03■■■■□ 3.68
TMEM55B-202ENST00000398020 LMTK2Q8IWU2 1503 aa38■■■■□ 3.67
TMEM55B-202ENST00000398020 FBXO31Q5XUX0 539 aaPredicted RBP38■■■■□ 3.67
TMEM55B-202ENST00000398020 PZPP20742 1482 aa38■■■■□ 3.67
TMEM55B-202ENST00000398020 SETD5Q9C0A6 1442 aa37.99■■■■□ 3.67
TMEM55B-202ENST00000398020 IQGAP3Q86VI3 1631 aa37.97■■■■□ 3.67
TMEM55B-202ENST00000398020 TRIM52Q96A61 297 aa37.95■■■■□ 3.66
TMEM55B-202ENST00000398020 CFAP65Q6ZU64 1925 aaKnown RBP37.93■■■■□ 3.66
TMEM55B-202ENST00000398020 EFCAB6Q5THR3 1501 aa37.93■■■■□ 3.66
TMEM55B-202ENST00000398020 NPATQ14207 1427 aa37.93■■■■□ 3.66
TMEM55B-202ENST00000398020 TRIM26Q12899 539 aaPredicted RBP37.92■■■■□ 3.66
TMEM55B-202ENST00000398020 TET3O43151 1660 aa37.91■■■■□ 3.66
TMEM55B-202ENST00000398020 RAB3GAP2Q9H2M9 1393 aa37.9■■■■□ 3.66
TMEM55B-202ENST00000398020 ARHGAP31Q2M1Z3 1444 aa37.9■■■■□ 3.66
TMEM55B-202ENST00000398020 PREX1Q8TCU6 1659 aa37.86■■■■□ 3.65
TMEM55B-202ENST00000398020 SETD1BQ9UPS6 1966 aaKnown RBP37.86■■■■□ 3.65
TMEM55B-202ENST00000398020 ERVK-7P63135 1459 aa37.85■■■■□ 3.65
TMEM55B-202ENST00000398020 TNRQ92752 1358 aa37.84■■■■□ 3.65
TMEM55B-202ENST00000398020 SPATA31D1Q6ZQQ2 1576 aa37.82■■■■□ 3.65
TMEM55B-202ENST00000398020 LMTK3Q96Q04 1460 aa37.82■■■■□ 3.65
TMEM55B-202ENST00000398020 E9PCH4 1651 aa37.82■■■■□ 3.64
TMEM55B-202ENST00000398020 UHRF1BP1Q6BDS2 1440 aa37.81■■■■□ 3.64
TMEM55B-202ENST00000398020 MYO3AQ8NEV4 1616 aa37.81■■■■□ 3.64
TMEM55B-202ENST00000398020 RPRD2Q5VT52 1461 aaKnown RBP37.76■■■■□ 3.64
TMEM55B-202ENST00000398020 SLC4A1APQ9BWU0 796 aaKnown RBP37.75■■■■□ 3.63
TMEM55B-202ENST00000398020 HSPA2P54652 639 aa37.72■■■■□ 3.63
TMEM55B-202ENST00000398020 SYNMO15061 1565 aa37.7■■■■□ 3.63
TMEM55B-202ENST00000398020 NOS1P29475 1434 aa37.7■■■■□ 3.63
TMEM55B-202ENST00000398020 PKD2Q13563 968 aa37.69■■■■□ 3.62
TMEM55B-202ENST00000398020 CEP170BQ9Y4F5 1589 aaPredicted RBP37.69■■■■□ 3.62
TMEM55B-202ENST00000398020 ZNF142P52746 1687 aaPredicted RBP37.67■■■■□ 3.62
TMEM55B-202ENST00000398020 MPHOSPH9Q99550 1183 aa37.66■■■■□ 3.62
TMEM55B-202ENST00000398020 NLRP1Q9C000 1473 aa37.66■■■■□ 3.62
TMEM55B-202ENST00000398020 A2ML1A8K2U0 1454 aa37.64■■■■□ 3.62
TMEM55B-202ENST00000398020 ACIN1Q9UKV3 1341 aaKnown RBP37.64■■■■□ 3.62
TMEM55B-202ENST00000398020 HRCP23327 699 aa37.63■■■■□ 3.62
TMEM55B-202ENST00000398020 FOXD1Q16676 465 aa37.63■■■■□ 3.61
TMEM55B-202ENST00000398020 SPHKAPQ2M3C7 1700 aa37.59■■■■□ 3.61
TMEM55B-202ENST00000398020 UGGT1Q9NYU2 1555 aa37.59■■■■□ 3.61
TMEM55B-202ENST00000398020 IDI1Q13907 227 aa37.58■■■■□ 3.61
TMEM55B-202ENST00000398020 PIK3C2BO00750 1634 aa37.56■■■■□ 3.6
TMEM55B-202ENST00000398020 PTPRTO14522 1441 aa37.54■■■■□ 3.6
TMEM55B-202ENST00000398020 PCGF6Q9BYE7 350 aa37.53■■■■□ 3.6
TMEM55B-202ENST00000398020 SLC52A1Q9NWF4 448 aa37.53■■■■□ 3.6
TMEM55B-202ENST00000398020 UBR1Q8IWV7 1749 aa37.5■■■■□ 3.59
TMEM55B-202ENST00000398020 PLA2R1Q13018 1463 aa37.5■■■■□ 3.59
TMEM55B-202ENST00000398020 STAG3Q9UJ98 1225 aa37.48■■■■□ 3.59
TMEM55B-202ENST00000398020 TRPM2O94759 1503 aa37.48■■■■□ 3.59
TMEM55B-202ENST00000398020 THEMISQ8N1K5 641 aaPredicted RBP37.46■■■■□ 3.59
TMEM55B-202ENST00000398020 CHGAP10645 457 aaKnown RBP37.43■■■■□ 3.58
TMEM55B-202ENST00000398020 ADGRB3O60242 1522 aa37.43■■■■□ 3.58
TMEM55B-202ENST00000398020 CLTCL1P53675 1640 aa37.42■■■■□ 3.58
TMEM55B-202ENST00000398020 STRCQ7RTU9 1775 aa37.4■■■■□ 3.58
TMEM55B-202ENST00000398020 MYO5BQ9ULV0 1848 aa37.39■■■■□ 3.58
TMEM55B-202ENST00000398020 KDM5AP29375 1690 aaKnown RBP37.38■■■■□ 3.57
TMEM55B-202ENST00000398020 TMEM131LA2VDJ0 1609 aa37.38■■■■□ 3.57
TMEM55B-202ENST00000398020 NCKAP5LQ9HCH0 1330 aa37.37■■■■□ 3.57
TMEM55B-202ENST00000398020 CCDC144AA2RUR9 1427 aa37.31■■■■□ 3.56
TMEM55B-202ENST00000398020 TMEM2Q9UHN6 1383 aa37.3■■■■□ 3.56
TMEM55B-202ENST00000398020 SLIT1O75093 1534 aa37.29■■■■□ 3.56
TMEM55B-202ENST00000398020 ANKLE2Q86XL3 938 aa37.28■■■■□ 3.56
TMEM55B-202ENST00000398020 ARHGAP23Q9P227 1491 aa37.28■■■■□ 3.56
TMEM55B-202ENST00000398020 POLR1AO95602 1720 aaPredicted RBP37.28■■■■□ 3.56
TMEM55B-202ENST00000398020 KIF1BO60333 1816 aa37.27■■■■□ 3.56
TMEM55B-202ENST00000398020 ANKRD30BQ9BXX2 1392 aa37.26■■■■□ 3.56
TMEM55B-202ENST00000398020 LTKP29376 864 aa37.25■■■■□ 3.55
TMEM55B-202ENST00000398020 TXNDC2Q86VQ3 553 aa37.23■■■■□ 3.55
TMEM55B-202ENST00000398020 NEURL4Q96JN8 1562 aa37.22■■■■□ 3.55
TMEM55B-202ENST00000398020 ZNF326Q5BKZ1 582 aaKnown RBP37.21■■■■□ 3.55
TMEM55B-202ENST00000398020 EID1Q9Y6B2 187 aa37.21■■■■□ 3.55
TMEM55B-202ENST00000398020 DHX57Q6P158 1386 aaKnown RBP37.2■■■■□ 3.55
TMEM55B-202ENST00000398020 SCAF11Q99590 1463 aaKnown RBP37.2■■■■□ 3.55
TMEM55B-202ENST00000398020 RIMS2Q9UQ26 1411 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms