RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
SUMO3-203ENST00000397898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.2
SUMO3-203ENST00000397898 DEPDC5O75140 1603 aa22.57■■□□□ 1.2
SUMO3-203ENST00000397898 RNF17Q9BXT8 1623 aaKnown RBP22.57■■□□□ 1.2
SUMO3-203ENST00000397898 UNC13BO14795 1591 aa22.56■■□□□ 1.2
SUMO3-203ENST00000397898 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
SUMO3-203ENST00000397898 MROH1Q8NDA8 1641 aa22.54■■□□□ 1.2
SUMO3-203ENST00000397898 NUP155O75694 1391 aa22.54■■□□□ 1.2
SUMO3-203ENST00000397898 PRDM15P57071 1507 aaPredicted RBP22.53■■□□□ 1.2
SUMO3-203ENST00000397898 MLECQ14165 292 aa22.53■■□□□ 1.2
SUMO3-203ENST00000397898 KANK1Q14678 1352 aa22.51■■□□□ 1.19
SUMO3-203ENST00000397898 KDM5DQ9BY66 1539 aa22.5■■□□□ 1.19
SUMO3-203ENST00000397898 VWDEQ8N2E2 1590 aa22.48■■□□□ 1.19
SUMO3-203ENST00000397898 FAM135AQ9P2D6 1515 aa22.47■■□□□ 1.19
SUMO3-203ENST00000397898 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
SUMO3-203ENST00000397898 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
SUMO3-203ENST00000397898 PZPP20742 1482 aa22.46■■□□□ 1.19
SUMO3-203ENST00000397898 WASHC2CQ9Y4E1 1318 aa22.46■■□□□ 1.19
SUMO3-203ENST00000397898 MPHOSPH9Q99550 1183 aa22.45■■□□□ 1.18
SUMO3-203ENST00000397898 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
SUMO3-203ENST00000397898 ABCC3O15438 1527 aa22.43■■□□□ 1.18
SUMO3-203ENST00000397898 LMTK2Q8IWU2 1503 aa22.42■■□□□ 1.18
SUMO3-203ENST00000397898 CEP152O94986 1710 aa22.41■■□□□ 1.18
SUMO3-203ENST00000397898 ZC3H13Q5T200 1668 aaKnown RBP22.41■■□□□ 1.18
SUMO3-203ENST00000397898 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
SUMO3-203ENST00000397898 ESF1Q9H501 851 aaKnown RBP22.4■■□□□ 1.18
SUMO3-203ENST00000397898 TET3O43151 1660 aa22.38■■□□□ 1.17
SUMO3-203ENST00000397898 PKD2Q13563 968 aa22.38■■□□□ 1.17
SUMO3-203ENST00000397898 CLTCQ00610 1675 aaKnown RBP22.37■■□□□ 1.17
SUMO3-203ENST00000397898 CNTLNQ9NXG0 1405 aa22.36■■□□□ 1.17
SUMO3-203ENST00000397898 EFCAB6Q5THR3 1501 aa22.36■■□□□ 1.17
SUMO3-203ENST00000397898 ADAMTSL3P82987 1691 aa22.36■■□□□ 1.17
SUMO3-203ENST00000397898 CAMSAP1Q5T5Y3 1602 aa22.35■■□□□ 1.17
SUMO3-203ENST00000397898 FER1L4A9Z1Z3 1794 aa22.35■■□□□ 1.17
SUMO3-203ENST00000397898 FOXD1Q16676 465 aa22.34■■□□□ 1.17
SUMO3-203ENST00000397898 MADDQ8WXG6 1647 aa22.34■■□□□ 1.17
SUMO3-203ENST00000397898 E9PCH4 1651 aa22.32■■□□□ 1.16
SUMO3-203ENST00000397898 NPATQ14207 1427 aa22.32■■□□□ 1.16
SUMO3-203ENST00000397898 ARHGAP31Q2M1Z3 1444 aa22.32■■□□□ 1.16
SUMO3-203ENST00000397898 ZMYM3Q14202 1370 aa22.32■■□□□ 1.16
SUMO3-203ENST00000397898 MROH2AA6NES4 1674 aa22.3■■□□□ 1.16
SUMO3-203ENST00000397898 RPRD2Q5VT52 1461 aaKnown RBP22.3■■□□□ 1.16
SUMO3-203ENST00000397898 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
SUMO3-203ENST00000397898 RIMS1Q86UR5 1692 aaKnown RBP22.28■■□□□ 1.16
SUMO3-203ENST00000397898 ANKRD30BQ9BXX2 1392 aa22.24■■□□□ 1.15
SUMO3-203ENST00000397898 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
SUMO3-203ENST00000397898 FBXO31Q5XUX0 539 aaPredicted RBP22.24■■□□□ 1.15
SUMO3-203ENST00000397898 C3P01024 1663 aa22.23■■□□□ 1.15
SUMO3-203ENST00000397898 PLA2R1Q13018 1463 aa22.23■■□□□ 1.15
SUMO3-203ENST00000397898 KDM4FA0A1W2PPD8 638 aa22.22■■□□□ 1.15
SUMO3-203ENST00000397898 PTPRTO14522 1441 aa22.22■■□□□ 1.15
SUMO3-203ENST00000397898 NOS1P29475 1434 aa22.21■■□□□ 1.15
SUMO3-203ENST00000397898 ERVK-7P63135 1459 aa22.21■■□□□ 1.15
SUMO3-203ENST00000397898 PREX1Q8TCU6 1659 aa22.21■■□□□ 1.15
SUMO3-203ENST00000397898 CFAP65Q6ZU64 1925 aaKnown RBP22.2■■□□□ 1.15
SUMO3-203ENST00000397898 SPHKAPQ2M3C7 1700 aa22.2■■□□□ 1.14
SUMO3-203ENST00000397898 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
SUMO3-203ENST00000397898 CLSPNQ9HAW4 1339 aa22.2■■□□□ 1.14
SUMO3-203ENST00000397898 PTPRMP28827 1452 aa22.19■■□□□ 1.14
SUMO3-203ENST00000397898 TRPM2O94759 1503 aa22.19■■□□□ 1.14
SUMO3-203ENST00000397898 SPATA31D1Q6ZQQ2 1576 aa22.19■■□□□ 1.14
SUMO3-203ENST00000397898 SYNMO15061 1565 aa22.16■■□□□ 1.14
SUMO3-203ENST00000397898 CCDC144AA2RUR9 1427 aa22.15■■□□□ 1.14
SUMO3-203ENST00000397898 SIN3AQ96ST3 1273 aa22.15■■□□□ 1.14
SUMO3-203ENST00000397898 TNRQ92752 1358 aa22.13■■□□□ 1.13
SUMO3-203ENST00000397898 UGGT1Q9NYU2 1555 aa22.13■■□□□ 1.13
SUMO3-203ENST00000397898 SLC52A1Q9NWF4 448 aa22.12■■□□□ 1.13
SUMO3-203ENST00000397898 CLTCL1P53675 1640 aa22.11■■□□□ 1.13
SUMO3-203ENST00000397898 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
SUMO3-203ENST00000397898 IDI1Q13907 227 aa22.1■■□□□ 1.13
SUMO3-203ENST00000397898 PIK3C2BO00750 1634 aa22.09■■□□□ 1.13
SUMO3-203ENST00000397898 NLRP1Q9C000 1473 aa22.04■■□□□ 1.12
SUMO3-203ENST00000397898 MYO3AQ8NEV4 1616 aa22.03■■□□□ 1.12
SUMO3-203ENST00000397898 CHGAP10645 457 aaKnown RBP22.02■■□□□ 1.11
SUMO3-203ENST00000397898 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
SUMO3-203ENST00000397898 KIF1BO60333 1816 aa22.01■■□□□ 1.11
SUMO3-203ENST00000397898 SETD1BQ9UPS6 1966 aaKnown RBP22■■□□□ 1.11
SUMO3-203ENST00000397898 STAG3Q9UJ98 1225 aa21.99■■□□□ 1.11
SUMO3-203ENST00000397898 ADGRB3O60242 1522 aa21.99■■□□□ 1.11
SUMO3-203ENST00000397898 RGL3Q3MIN7 710 aa21.99■■□□□ 1.11
SUMO3-203ENST00000397898 TMEM131LA2VDJ0 1609 aa21.99■■□□□ 1.11
SUMO3-203ENST00000397898 NEURL4Q96JN8 1562 aa21.97■■□□□ 1.11
SUMO3-203ENST00000397898 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
SUMO3-203ENST00000397898 A2ML1A8K2U0 1454 aa21.97■■□□□ 1.11
SUMO3-203ENST00000397898 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
SUMO3-203ENST00000397898 CEP170BQ9Y4F5 1589 aaPredicted RBP21.96■■□□□ 1.11
SUMO3-203ENST00000397898 ZEB1P37275 1124 aaPredicted RBP21.95■■□□□ 1.1
SUMO3-203ENST00000397898 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
SUMO3-203ENST00000397898 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
SUMO3-203ENST00000397898 KDM5AP29375 1690 aaKnown RBP21.94■■□□□ 1.1
SUMO3-203ENST00000397898 L3MBTL2Q969R5 705 aa21.94■■□□□ 1.1
SUMO3-203ENST00000397898 TIMELESSQ9UNS1 1208 aa21.94■■□□□ 1.1
SUMO3-203ENST00000397898 ZNF142P52746 1687 aaPredicted RBP21.94■■□□□ 1.1
SUMO3-203ENST00000397898 MYO5BQ9ULV0 1848 aa21.93■■□□□ 1.1
SUMO3-203ENST00000397898 THEMISQ8N1K5 641 aaPredicted RBP21.9■■□□□ 1.1
SUMO3-203ENST00000397898 DCAF11Q8TEB1 546 aa21.89■■□□□ 1.1
SUMO3-203ENST00000397898 RPGRIP1LQ68CZ1 1315 aa21.89■■□□□ 1.09
SUMO3-203ENST00000397898 TMEM2Q9UHN6 1383 aa21.87■■□□□ 1.09
SUMO3-203ENST00000397898 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
SUMO3-203ENST00000397898 KDM2AQ9Y2K7 1162 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms