RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TSPY4P0CV99 314 aa25.37■■□□□ 1.65
TSPAN4-205ENST00000397406 TSPY10P0CW01 314 aa25.37■■□□□ 1.65
TSPAN4-205ENST00000397406 ANKRD30AQ9BXX3 1397 aa25.34■■□□□ 1.65
TSPAN4-205ENST00000397406 PREX1Q8TCU6 1659 aa25.34■■□□□ 1.65
TSPAN4-205ENST00000397406 RRP7BPQ9NSQ0 103 aa25.33■■□□□ 1.65
TSPAN4-205ENST00000397406 CNTLNQ9NXG0 1405 aa25.33■■□□□ 1.65
TSPAN4-205ENST00000397406 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
TSPAN4-205ENST00000397406 DHX29Q7Z478 1369 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-205ENST00000397406 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
TSPAN4-205ENST00000397406 GGT6Q6P531 493 aa25.3■■□□□ 1.64
TSPAN4-205ENST00000397406 ESF1Q9H501 851 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-205ENST00000397406 UHRF1BP1Q6BDS2 1440 aa25.29■■□□□ 1.64
TSPAN4-205ENST00000397406 KIF15Q9NS87 1388 aa25.26■■□□□ 1.63
TSPAN4-205ENST00000397406 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
TSPAN4-205ENST00000397406 HRCP23327 699 aa25.24■■□□□ 1.63
TSPAN4-205ENST00000397406 CLTCQ00610 1675 aaKnown RBP25.24■■□□□ 1.63
TSPAN4-205ENST00000397406 STRCQ7RTU9 1775 aa25.23■■□□□ 1.63
TSPAN4-205ENST00000397406 NPATQ14207 1427 aa25.23■■□□□ 1.63
TSPAN4-205ENST00000397406 SETD1BQ9UPS6 1966 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-205ENST00000397406 DUOX2Q9NRD8 1548 aa25.22■■□□□ 1.63
TSPAN4-205ENST00000397406 KIF3BO15066 747 aa25.21■■□□□ 1.63
TSPAN4-205ENST00000397406 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
TSPAN4-205ENST00000397406 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.62
TSPAN4-205ENST00000397406 ERBINQ96RT1 1412 aa25.15■■□□□ 1.62
TSPAN4-205ENST00000397406 FBXO41Q8TF61 875 aa25.12■■□□□ 1.61
TSPAN4-205ENST00000397406 FBXO31Q5XUX0 539 aaPredicted RBP25.12■■□□□ 1.61
TSPAN4-205ENST00000397406 EIF2AK4Q9P2K8 1649 aaKnown RBP25.11■■□□□ 1.61
TSPAN4-205ENST00000397406 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
TSPAN4-205ENST00000397406 UNC13BO14795 1591 aa25.09■■□□□ 1.61
TSPAN4-205ENST00000397406 MYO3AQ8NEV4 1616 aa25.08■■□□□ 1.61
TSPAN4-205ENST00000397406 KDM5DQ9BY66 1539 aa25.08■■□□□ 1.61
TSPAN4-205ENST00000397406 ACIN1Q9UKV3 1341 aaKnown RBP25.08■■□□□ 1.61
TSPAN4-205ENST00000397406 CAMSAP1Q5T5Y3 1602 aa25.07■■□□□ 1.6
TSPAN4-205ENST00000397406 PTPRTO14522 1441 aa25.07■■□□□ 1.6
TSPAN4-205ENST00000397406 MROH1Q8NDA8 1641 aa25.06■■□□□ 1.6
TSPAN4-205ENST00000397406 WASHC2CQ9Y4E1 1318 aa25.05■■□□□ 1.6
TSPAN4-205ENST00000397406 CERKQ8TCT0 537 aa25.05■■□□□ 1.6
TSPAN4-205ENST00000397406 PZPP20742 1482 aa25.05■■□□□ 1.6
TSPAN4-205ENST00000397406 DEPDC5O75140 1603 aa25.05■■□□□ 1.6
TSPAN4-205ENST00000397406 RNF17Q9BXT8 1623 aaKnown RBP25.05■■□□□ 1.6
TSPAN4-205ENST00000397406 CEP170BQ9Y4F5 1589 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-205ENST00000397406 FAM135AQ9P2D6 1515 aa25.04■■□□□ 1.6
TSPAN4-205ENST00000397406 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-205ENST00000397406 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
TSPAN4-205ENST00000397406 NCKAP5LQ9HCH0 1330 aa25.03■■□□□ 1.6
TSPAN4-205ENST00000397406 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-205ENST00000397406 TRIM52Q96A61 297 aa25.01■■□□□ 1.59
TSPAN4-205ENST00000397406 ABCC3O15438 1527 aa25.01■■□□□ 1.59
TSPAN4-205ENST00000397406 TNRQ92752 1358 aa25■■□□□ 1.59
TSPAN4-205ENST00000397406 A2ML1A8K2U0 1454 aa24.99■■□□□ 1.59
TSPAN4-205ENST00000397406 IQGAP3Q86VI3 1631 aa24.99■■□□□ 1.59
TSPAN4-205ENST00000397406 PLA2R1Q13018 1463 aa24.97■■□□□ 1.59
TSPAN4-205ENST00000397406 PRDM15P57071 1507 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-205ENST00000397406 LTBP4Q8N2S1 1624 aa24.95■■□□□ 1.58
TSPAN4-205ENST00000397406 NUP155O75694 1391 aa24.95■■□□□ 1.58
TSPAN4-205ENST00000397406 VWDEQ8N2E2 1590 aa24.93■■□□□ 1.58
TSPAN4-205ENST00000397406 MPHOSPH9Q99550 1183 aa24.93■■□□□ 1.58
TSPAN4-205ENST00000397406 CLSPNQ9HAW4 1339 aa24.91■■□□□ 1.58
TSPAN4-205ENST00000397406 PKD2Q13563 968 aa24.9■■□□□ 1.58
TSPAN4-205ENST00000397406 SPATA31D1Q6ZQQ2 1576 aa24.89■■□□□ 1.57
TSPAN4-205ENST00000397406 ERVK-7P63135 1459 aa24.88■■□□□ 1.57
TSPAN4-205ENST00000397406 ZC3H13Q5T200 1668 aaKnown RBP24.88■■□□□ 1.57
TSPAN4-205ENST00000397406 SLC4A1APQ9BWU0 796 aaKnown RBP24.87■■□□□ 1.57
TSPAN4-205ENST00000397406 CEP152O94986 1710 aa24.87■■□□□ 1.57
TSPAN4-205ENST00000397406 ZNF335Q9H4Z2 1342 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-205ENST00000397406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.86■■□□□ 1.57
TSPAN4-205ENST00000397406 NLRP1Q9C000 1473 aa24.86■■□□□ 1.57
TSPAN4-205ENST00000397406 TET3O43151 1660 aa24.85■■□□□ 1.57
TSPAN4-205ENST00000397406 NEURL4Q96JN8 1562 aa24.84■■□□□ 1.57
TSPAN4-205ENST00000397406 ARHGAP31Q2M1Z3 1444 aa24.83■■□□□ 1.56
TSPAN4-205ENST00000397406 KANK1Q14678 1352 aa24.82■■□□□ 1.56
TSPAN4-205ENST00000397406 LMTK2Q8IWU2 1503 aa24.82■■□□□ 1.56
TSPAN4-205ENST00000397406 UGGT1Q9NYU2 1555 aa24.81■■□□□ 1.56
TSPAN4-205ENST00000397406 E9PCH4 1651 aa24.8■■□□□ 1.56
TSPAN4-205ENST00000397406 FOXD1Q16676 465 aa24.78■■□□□ 1.56
TSPAN4-205ENST00000397406 THEMISQ8N1K5 641 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-205ENST00000397406 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
TSPAN4-205ENST00000397406 ANKRD30BQ9BXX2 1392 aa24.76■■□□□ 1.55
TSPAN4-205ENST00000397406 ANKLE2Q86XL3 938 aa24.74■■□□□ 1.55
TSPAN4-205ENST00000397406 MED14O60244 1454 aa24.73■■□□□ 1.55
TSPAN4-205ENST00000397406 POLR1AO95602 1720 aaPredicted RBP24.72■■□□□ 1.55
TSPAN4-205ENST00000397406 ZEB1P37275 1124 aaPredicted RBP24.71■■□□□ 1.55
TSPAN4-205ENST00000397406 IQSEC2Q5JU85 1478 aa24.7■■□□□ 1.55
TSPAN4-205ENST00000397406 SPHKAPQ2M3C7 1700 aa24.7■■□□□ 1.54
TSPAN4-205ENST00000397406 CFAP65Q6ZU64 1925 aaKnown RBP24.7■■□□□ 1.54
TSPAN4-205ENST00000397406 SIN3AQ96ST3 1273 aa24.69■■□□□ 1.54
TSPAN4-205ENST00000397406 NPHP4O75161 1426 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-205ENST00000397406 UBR1Q8IWV7 1749 aa24.69■■□□□ 1.54
TSPAN4-205ENST00000397406 LTKP29376 864 aa24.67■■□□□ 1.54
TSPAN4-205ENST00000397406 NOS1P29475 1434 aa24.67■■□□□ 1.54
TSPAN4-205ENST00000397406 ARHGAP23Q9P227 1491 aa24.66■■□□□ 1.54
TSPAN4-205ENST00000397406 RPRD2Q5VT52 1461 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-205ENST00000397406 SYNMO15061 1565 aa24.66■■□□□ 1.54
TSPAN4-205ENST00000397406 IDI1Q13907 227 aa24.65■■□□□ 1.54
TSPAN4-205ENST00000397406 PIK3C2BO00750 1634 aa24.63■■□□□ 1.53
TSPAN4-205ENST00000397406 SLIT1O75093 1534 aa24.63■■□□□ 1.53
TSPAN4-205ENST00000397406 TRPM2O94759 1503 aa24.63■■□□□ 1.53
TSPAN4-205ENST00000397406 NEUROD1Q13562 356 aa24.61■■□□□ 1.53
TSPAN4-205ENST00000397406 IQGAP1P46940 1657 aa24.59■■□□□ 1.53
TSPAN4-205ENST00000397406 SCAF11Q99590 1463 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms