RNA–Protein interactions for RNA: ENST00000397343.2

PGAM1P4-201, Transcript of phosphoglycerate mutase 1 pseudogene 4, humanhuman

BASIC

Gene PGAM1P4, Length 750 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1P4-201ENST00000397343 KIF3BO15066 747 aa18.49■□□□□ 0.55
PGAM1P4-201ENST00000397343 HRCP23327 699 aa18.49■□□□□ 0.55
PGAM1P4-201ENST00000397343 AGLP35573 1532 aa18.48■□□□□ 0.55
PGAM1P4-201ENST00000397343 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
PGAM1P4-201ENST00000397343 RAB3GAP2Q9H2M9 1393 aa18.43■□□□□ 0.54
PGAM1P4-201ENST00000397343 TRIM52Q96A61 297 aa18.43■□□□□ 0.54
PGAM1P4-201ENST00000397343 GGT6Q6P531 493 aa18.42■□□□□ 0.54
PGAM1P4-201ENST00000397343 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
PGAM1P4-201ENST00000397343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
PGAM1P4-201ENST00000397343 KANK1Q14678 1352 aa18.41■□□□□ 0.54
PGAM1P4-201ENST00000397343 MLECQ14165 292 aa18.39■□□□□ 0.53
PGAM1P4-201ENST00000397343 ESF1Q9H501 851 aaKnown RBP18.39■□□□□ 0.53
PGAM1P4-201ENST00000397343 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.53
PGAM1P4-201ENST00000397343 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
PGAM1P4-201ENST00000397343 NUP155O75694 1391 aa18.37■□□□□ 0.53
PGAM1P4-201ENST00000397343 EIF2AK4Q9P2K8 1649 aaKnown RBP18.37■□□□□ 0.53
PGAM1P4-201ENST00000397343 WASHC2CQ9Y4E1 1318 aa18.34■□□□□ 0.53
PGAM1P4-201ENST00000397343 SETD1BQ9UPS6 1966 aaKnown RBP18.33■□□□□ 0.52
PGAM1P4-201ENST00000397343 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
PGAM1P4-201ENST00000397343 C3P01024 1663 aa18.31■□□□□ 0.52
PGAM1P4-201ENST00000397343 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
PGAM1P4-201ENST00000397343 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
PGAM1P4-201ENST00000397343 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
PGAM1P4-201ENST00000397343 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
PGAM1P4-201ENST00000397343 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
PGAM1P4-201ENST00000397343 PREX1Q8TCU6 1659 aa18.27■□□□□ 0.52
PGAM1P4-201ENST00000397343 PRDM15P57071 1507 aaPredicted RBP18.27■□□□□ 0.51
PGAM1P4-201ENST00000397343 FAM135AQ9P2D6 1515 aa18.27■□□□□ 0.51
PGAM1P4-201ENST00000397343 UNC13BO14795 1591 aa18.26■□□□□ 0.51
PGAM1P4-201ENST00000397343 KDM5DQ9BY66 1539 aa18.25■□□□□ 0.51
PGAM1P4-201ENST00000397343 DEPDC5O75140 1603 aa18.25■□□□□ 0.51
PGAM1P4-201ENST00000397343 PKD2Q13563 968 aa18.24■□□□□ 0.51
PGAM1P4-201ENST00000397343 MROH1Q8NDA8 1641 aa18.22■□□□□ 0.51
PGAM1P4-201ENST00000397343 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
PGAM1P4-201ENST00000397343 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
PGAM1P4-201ENST00000397343 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
PGAM1P4-201ENST00000397343 PZPP20742 1482 aa18.21■□□□□ 0.51
PGAM1P4-201ENST00000397343 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
PGAM1P4-201ENST00000397343 ABCC3O15438 1527 aa18.21■□□□□ 0.51
PGAM1P4-201ENST00000397343 HSPA2P54652 639 aa18.2■□□□□ 0.5
PGAM1P4-201ENST00000397343 IQGAP3Q86VI3 1631 aa18.2■□□□□ 0.5
PGAM1P4-201ENST00000397343 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
PGAM1P4-201ENST00000397343 ARHGAP31Q2M1Z3 1444 aa18.18■□□□□ 0.5
PGAM1P4-201ENST00000397343 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
PGAM1P4-201ENST00000397343 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
PGAM1P4-201ENST00000397343 NPATQ14207 1427 aa18.17■□□□□ 0.5
PGAM1P4-201ENST00000397343 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
PGAM1P4-201ENST00000397343 STRCQ7RTU9 1775 aa18.17■□□□□ 0.5
PGAM1P4-201ENST00000397343 RPRD2Q5VT52 1461 aaKnown RBP18.15■□□□□ 0.5
PGAM1P4-201ENST00000397343 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
PGAM1P4-201ENST00000397343 TET3O43151 1660 aa18.14■□□□□ 0.49
PGAM1P4-201ENST00000397343 FOXD1Q16676 465 aa18.13■□□□□ 0.49
PGAM1P4-201ENST00000397343 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
PGAM1P4-201ENST00000397343 EFCAB6Q5THR3 1501 aa18.13■□□□□ 0.49
PGAM1P4-201ENST00000397343 ZNF142P52746 1687 aaPredicted RBP18.1■□□□□ 0.49
PGAM1P4-201ENST00000397343 FBXO31Q5XUX0 539 aaPredicted RBP18.1■□□□□ 0.49
PGAM1P4-201ENST00000397343 CEP152O94986 1710 aa18.09■□□□□ 0.49
PGAM1P4-201ENST00000397343 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
PGAM1P4-201ENST00000397343 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
PGAM1P4-201ENST00000397343 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
PGAM1P4-201ENST00000397343 ANKRD30BQ9BXX2 1392 aa18.08■□□□□ 0.49
PGAM1P4-201ENST00000397343 PTPRTO14522 1441 aa18.07■□□□□ 0.48
PGAM1P4-201ENST00000397343 NOS1P29475 1434 aa18.06■□□□□ 0.48
PGAM1P4-201ENST00000397343 ERVK-7P63135 1459 aa18.06■□□□□ 0.48
PGAM1P4-201ENST00000397343 TNRQ92752 1358 aa18.05■□□□□ 0.48
PGAM1P4-201ENST00000397343 CCDC144AA2RUR9 1427 aa18.05■□□□□ 0.48
PGAM1P4-201ENST00000397343 E9PCH4 1651 aa18.04■□□□□ 0.48
PGAM1P4-201ENST00000397343 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
PGAM1P4-201ENST00000397343 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
PGAM1P4-201ENST00000397343 PLA2R1Q13018 1463 aa18.01■□□□□ 0.47
PGAM1P4-201ENST00000397343 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
PGAM1P4-201ENST00000397343 IDI1Q13907 227 aa18.01■□□□□ 0.47
PGAM1P4-201ENST00000397343 ILDR1Q86SU0 546 aaPredicted RBP18.01■□□□□ 0.47
PGAM1P4-201ENST00000397343 TRPM2O94759 1503 aa18■□□□□ 0.47
PGAM1P4-201ENST00000397343 NEUROD1Q13562 356 aa18■□□□□ 0.47
PGAM1P4-201ENST00000397343 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
PGAM1P4-201ENST00000397343 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
PGAM1P4-201ENST00000397343 A2ML1A8K2U0 1454 aa17.99■□□□□ 0.47
PGAM1P4-201ENST00000397343 NLRP1Q9C000 1473 aa17.97■□□□□ 0.47
PGAM1P4-201ENST00000397343 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
PGAM1P4-201ENST00000397343 CFAP65Q6ZU64 1925 aaKnown RBP17.95■□□□□ 0.46
PGAM1P4-201ENST00000397343 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
PGAM1P4-201ENST00000397343 THEMISQ8N1K5 641 aaPredicted RBP17.94■□□□□ 0.46
PGAM1P4-201ENST00000397343 SYNMO15061 1565 aa17.93■□□□□ 0.46
PGAM1P4-201ENST00000397343 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
PGAM1P4-201ENST00000397343 RGL3Q3MIN7 710 aa17.93■□□□□ 0.46
PGAM1P4-201ENST00000397343 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
PGAM1P4-201ENST00000397343 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
PGAM1P4-201ENST00000397343 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
PGAM1P4-201ENST00000397343 STAC3Q96MF2 364 aa17.91■□□□□ 0.46
PGAM1P4-201ENST00000397343 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
PGAM1P4-201ENST00000397343 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
PGAM1P4-201ENST00000397343 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
PGAM1P4-201ENST00000397343 UGGT1Q9NYU2 1555 aa17.89■□□□□ 0.45
PGAM1P4-201ENST00000397343 CLTCL1P53675 1640 aa17.89■□□□□ 0.45
PGAM1P4-201ENST00000397343 NCKAP5LQ9HCH0 1330 aa17.89■□□□□ 0.45
PGAM1P4-201ENST00000397343 FBXO41Q8TF61 875 aa17.88■□□□□ 0.45
PGAM1P4-201ENST00000397343 POLR1AO95602 1720 aaPredicted RBP17.88■□□□□ 0.45
PGAM1P4-201ENST00000397343 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
PGAM1P4-201ENST00000397343 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms