RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
GAPDH-203ENST00000396858 ATP10AO60312 1499 aa20.93■□□□□ 0.94
GAPDH-203ENST00000396858 PRDM15P57071 1507 aaPredicted RBP20.92■□□□□ 0.94
GAPDH-203ENST00000396858 HRCP23327 699 aa20.91■□□□□ 0.94
GAPDH-203ENST00000396858 PZPP20742 1482 aa20.9■□□□□ 0.94
GAPDH-203ENST00000396858 TRIM52Q96A61 297 aa20.89■□□□□ 0.93
GAPDH-203ENST00000396858 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.93
GAPDH-203ENST00000396858 FAM135AQ9P2D6 1515 aa20.87■□□□□ 0.93
GAPDH-203ENST00000396858 AGLP35573 1532 aa20.86■□□□□ 0.93
GAPDH-203ENST00000396858 KIF3BO15066 747 aa20.85■□□□□ 0.93
GAPDH-203ENST00000396858 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
GAPDH-203ENST00000396858 NUP155O75694 1391 aa20.85■□□□□ 0.93
GAPDH-203ENST00000396858 CCER1Q8TC90 406 aaPredicted RBP20.83■□□□□ 0.93
GAPDH-203ENST00000396858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
GAPDH-203ENST00000396858 CEP152O94986 1710 aa20.81■□□□□ 0.92
GAPDH-203ENST00000396858 ACIN1Q9UKV3 1341 aaKnown RBP20.79■□□□□ 0.92
GAPDH-203ENST00000396858 ABCC3O15438 1527 aa20.78■□□□□ 0.92
GAPDH-203ENST00000396858 TET3O43151 1660 aa20.78■□□□□ 0.92
GAPDH-203ENST00000396858 KANK1Q14678 1352 aa20.78■□□□□ 0.92
GAPDH-203ENST00000396858 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.92
GAPDH-203ENST00000396858 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
GAPDH-203ENST00000396858 SLC4A1APQ9BWU0 796 aaKnown RBP20.76■□□□□ 0.91
GAPDH-203ENST00000396858 EFCAB6Q5THR3 1501 aa20.76■□□□□ 0.91
GAPDH-203ENST00000396858 LMTK2Q8IWU2 1503 aa20.76■□□□□ 0.91
GAPDH-203ENST00000396858 GGT6Q6P531 493 aa20.75■□□□□ 0.91
GAPDH-203ENST00000396858 CAMSAP1Q5T5Y3 1602 aa20.74■□□□□ 0.91
GAPDH-203ENST00000396858 E9PCH4 1651 aa20.73■□□□□ 0.91
GAPDH-203ENST00000396858 FOXD1Q16676 465 aa20.72■□□□□ 0.91
GAPDH-203ENST00000396858 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
GAPDH-203ENST00000396858 PKD2Q13563 968 aa20.7■□□□□ 0.9
GAPDH-203ENST00000396858 MLECQ14165 292 aa20.69■□□□□ 0.9
GAPDH-203ENST00000396858 CLTCQ00610 1675 aaKnown RBP20.69■□□□□ 0.9
GAPDH-203ENST00000396858 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
GAPDH-203ENST00000396858 SPHKAPQ2M3C7 1700 aa20.64■□□□□ 0.9
GAPDH-203ENST00000396858 NPATQ14207 1427 aa20.64■□□□□ 0.89
GAPDH-203ENST00000396858 WASHC2CQ9Y4E1 1318 aa20.64■□□□□ 0.89
GAPDH-203ENST00000396858 FER1L4A9Z1Z3 1794 aa20.64■□□□□ 0.89
GAPDH-203ENST00000396858 ANKRD30BQ9BXX2 1392 aa20.63■□□□□ 0.89
GAPDH-203ENST00000396858 TRPM2O94759 1503 aa20.62■□□□□ 0.89
GAPDH-203ENST00000396858 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
GAPDH-203ENST00000396858 PLA2R1Q13018 1463 aa20.61■□□□□ 0.89
GAPDH-203ENST00000396858 MADDQ8WXG6 1647 aa20.6■□□□□ 0.89
GAPDH-203ENST00000396858 MROH2AA6NES4 1674 aa20.59■□□□□ 0.89
GAPDH-203ENST00000396858 ARHGAP31Q2M1Z3 1444 aa20.59■□□□□ 0.89
GAPDH-203ENST00000396858 PREX1Q8TCU6 1659 aa20.58■□□□□ 0.88
GAPDH-203ENST00000396858 CLTCL1P53675 1640 aa20.57■□□□□ 0.88
GAPDH-203ENST00000396858 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
GAPDH-203ENST00000396858 CNTLNQ9NXG0 1405 aa20.57■□□□□ 0.88
GAPDH-203ENST00000396858 SYNMO15061 1565 aa20.56■□□□□ 0.88
GAPDH-203ENST00000396858 UGGT1Q9NYU2 1555 aa20.56■□□□□ 0.88
GAPDH-203ENST00000396858 PTPRTO14522 1441 aa20.56■□□□□ 0.88
GAPDH-203ENST00000396858 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
GAPDH-203ENST00000396858 ADAMTSL3P82987 1691 aa20.55■□□□□ 0.88
GAPDH-203ENST00000396858 RIMS1Q86UR5 1692 aaKnown RBP20.55■□□□□ 0.88
GAPDH-203ENST00000396858 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
GAPDH-203ENST00000396858 CCDC144AA2RUR9 1427 aa20.54■□□□□ 0.88
GAPDH-203ENST00000396858 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
GAPDH-203ENST00000396858 ESF1Q9H501 851 aaKnown RBP20.53■□□□□ 0.88
GAPDH-203ENST00000396858 NOS1P29475 1434 aa20.53■□□□□ 0.88
GAPDH-203ENST00000396858 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
GAPDH-203ENST00000396858 C3P01024 1663 aa20.51■□□□□ 0.87
GAPDH-203ENST00000396858 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
GAPDH-203ENST00000396858 ZMYM3Q14202 1370 aa20.48■□□□□ 0.87
GAPDH-203ENST00000396858 CFAP65Q6ZU64 1925 aaKnown RBP20.47■□□□□ 0.87
GAPDH-203ENST00000396858 TONSLQ96HA7 1378 aa20.46■□□□□ 0.87
GAPDH-203ENST00000396858 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
GAPDH-203ENST00000396858 FBXO31Q5XUX0 539 aaPredicted RBP20.45■□□□□ 0.86
GAPDH-203ENST00000396858 ADGRB3O60242 1522 aa20.44■□□□□ 0.86
GAPDH-203ENST00000396858 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
GAPDH-203ENST00000396858 KIF1BO60333 1816 aa20.4■□□□□ 0.86
GAPDH-203ENST00000396858 TNRQ92752 1358 aa20.4■□□□□ 0.86
GAPDH-203ENST00000396858 CEBPAP49715 358 aaPredicted RBP20.39■□□□□ 0.85
GAPDH-203ENST00000396858 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
GAPDH-203ENST00000396858 MYO3AQ8NEV4 1616 aa20.38■□□□□ 0.85
GAPDH-203ENST00000396858 NEURL4Q96JN8 1562 aa20.38■□□□□ 0.85
GAPDH-203ENST00000396858 PTPRMP28827 1452 aa20.37■□□□□ 0.85
GAPDH-203ENST00000396858 TMEM131LA2VDJ0 1609 aa20.35■□□□□ 0.85
GAPDH-203ENST00000396858 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.85
GAPDH-203ENST00000396858 IFT172Q9UG01 1749 aa20.33■□□□□ 0.84
GAPDH-203ENST00000396858 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
GAPDH-203ENST00000396858 CHGAP10645 457 aaKnown RBP20.32■□□□□ 0.84
GAPDH-203ENST00000396858 NLRP1Q9C000 1473 aa20.31■□□□□ 0.84
GAPDH-203ENST00000396858 IDI1Q13907 227 aa20.31■□□□□ 0.84
GAPDH-203ENST00000396858 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
GAPDH-203ENST00000396858 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
GAPDH-203ENST00000396858 TIMELESSQ9UNS1 1208 aa20.31■□□□□ 0.84
GAPDH-203ENST00000396858 NEXMIFQ5QGS0 1516 aa20.28■□□□□ 0.84
GAPDH-203ENST00000396858 UBR1Q8IWV7 1749 aa20.28■□□□□ 0.84
GAPDH-203ENST00000396858 A2ML1A8K2U0 1454 aa20.28■□□□□ 0.84
GAPDH-203ENST00000396858 ZNF142P52746 1687 aaPredicted RBP20.28■□□□□ 0.84
GAPDH-203ENST00000396858 PPLO60437 1756 aa20.28■□□□□ 0.84
GAPDH-203ENST00000396858 CEP170BQ9Y4F5 1589 aaPredicted RBP20.27■□□□□ 0.84
GAPDH-203ENST00000396858 KDM5AP29375 1690 aaKnown RBP20.26■□□□□ 0.83
GAPDH-203ENST00000396858 MYOM2P54296 1465 aa20.26■□□□□ 0.83
GAPDH-203ENST00000396858 KDM4FA0A1W2PPD8 638 aa20.24■□□□□ 0.83
GAPDH-203ENST00000396858 ZNF326Q5BKZ1 582 aaKnown RBP20.24■□□□□ 0.83
GAPDH-203ENST00000396858 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
GAPDH-203ENST00000396858 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
GAPDH-203ENST00000396858 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
GAPDH-203ENST00000396858 PRAG1Q86YV5 1406 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms