RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 PRDM15P57071 1507 aaPredicted RBP24.78■■□□□ 1.56
AP1S3-202ENST00000396653 KIF3BO15066 747 aa24.77■■□□□ 1.56
AP1S3-202ENST00000396653 ZC3H13Q5T200 1668 aaKnown RBP24.77■■□□□ 1.56
AP1S3-202ENST00000396653 UNC13BO14795 1591 aa24.76■■□□□ 1.55
AP1S3-202ENST00000396653 PPP6R1Q9UPN7 881 aa24.75■■□□□ 1.55
AP1S3-202ENST00000396653 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
AP1S3-202ENST00000396653 RIMS1Q86UR5 1692 aaKnown RBP24.74■■□□□ 1.55
AP1S3-202ENST00000396653 KDM5DQ9BY66 1539 aa24.73■■□□□ 1.55
AP1S3-202ENST00000396653 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
AP1S3-202ENST00000396653 MLECQ14165 292 aa24.72■■□□□ 1.55
AP1S3-202ENST00000396653 CLTCQ00610 1675 aaKnown RBP24.71■■□□□ 1.55
AP1S3-202ENST00000396653 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
AP1S3-202ENST00000396653 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
AP1S3-202ENST00000396653 GGT6Q6P531 493 aa24.69■■□□□ 1.54
AP1S3-202ENST00000396653 KDM4FA0A1W2PPD8 638 aa24.68■■□□□ 1.54
AP1S3-202ENST00000396653 CEP152O94986 1710 aa24.68■■□□□ 1.54
AP1S3-202ENST00000396653 ABCC3O15438 1527 aa24.66■■□□□ 1.54
AP1S3-202ENST00000396653 IQGAP3Q86VI3 1631 aa24.65■■□□□ 1.54
AP1S3-202ENST00000396653 SETD5Q9C0A6 1442 aa24.65■■□□□ 1.54
AP1S3-202ENST00000396653 LMTK2Q8IWU2 1503 aa24.65■■□□□ 1.54
AP1S3-202ENST00000396653 KANK1Q14678 1352 aa24.65■■□□□ 1.54
AP1S3-202ENST00000396653 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.53
AP1S3-202ENST00000396653 C3P01024 1663 aa24.63■■□□□ 1.53
AP1S3-202ENST00000396653 ESF1Q9H501 851 aaKnown RBP24.63■■□□□ 1.53
AP1S3-202ENST00000396653 PTPRMP28827 1452 aa24.62■■□□□ 1.53
AP1S3-202ENST00000396653 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
AP1S3-202ENST00000396653 TET3O43151 1660 aa24.6■■□□□ 1.53
AP1S3-202ENST00000396653 WASHC2CQ9Y4E1 1318 aa24.6■■□□□ 1.53
AP1S3-202ENST00000396653 EFCAB6Q5THR3 1501 aa24.56■■□□□ 1.52
AP1S3-202ENST00000396653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
AP1S3-202ENST00000396653 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
AP1S3-202ENST00000396653 PZPP20742 1482 aa24.55■■□□□ 1.52
AP1S3-202ENST00000396653 NUP155O75694 1391 aa24.54■■□□□ 1.52
AP1S3-202ENST00000396653 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
AP1S3-202ENST00000396653 ARHGAP31Q2M1Z3 1444 aa24.54■■□□□ 1.52
AP1S3-202ENST00000396653 HRCP23327 699 aa24.53■■□□□ 1.52
AP1S3-202ENST00000396653 RPRD2Q5VT52 1461 aaKnown RBP24.51■■□□□ 1.51
AP1S3-202ENST00000396653 NPATQ14207 1427 aa24.5■■□□□ 1.51
AP1S3-202ENST00000396653 E9PCH4 1651 aa24.49■■□□□ 1.51
AP1S3-202ENST00000396653 PREX1Q8TCU6 1659 aa24.49■■□□□ 1.51
AP1S3-202ENST00000396653 SETD1BQ9UPS6 1966 aaKnown RBP24.48■■□□□ 1.51
AP1S3-202ENST00000396653 SPATA31D1Q6ZQQ2 1576 aa24.47■■□□□ 1.51
AP1S3-202ENST00000396653 TRIM52Q96A61 297 aa24.45■■□□□ 1.5
AP1S3-202ENST00000396653 ERVK-7P63135 1459 aa24.45■■□□□ 1.5
AP1S3-202ENST00000396653 CFAP65Q6ZU64 1925 aaKnown RBP24.43■■□□□ 1.5
AP1S3-202ENST00000396653 CEBPAP49715 358 aaPredicted RBP24.43■■□□□ 1.5
AP1S3-202ENST00000396653 SPHKAPQ2M3C7 1700 aa24.4■■□□□ 1.5
AP1S3-202ENST00000396653 MYO3AQ8NEV4 1616 aa24.39■■□□□ 1.5
AP1S3-202ENST00000396653 NOS1P29475 1434 aa24.39■■□□□ 1.5
AP1S3-202ENST00000396653 ZNF142P52746 1687 aaPredicted RBP24.37■■□□□ 1.49
AP1S3-202ENST00000396653 TNRQ92752 1358 aa24.37■■□□□ 1.49
AP1S3-202ENST00000396653 SLC4A1APQ9BWU0 796 aaKnown RBP24.36■■□□□ 1.49
AP1S3-202ENST00000396653 SYNMO15061 1565 aa24.36■■□□□ 1.49
AP1S3-202ENST00000396653 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
AP1S3-202ENST00000396653 FBXO31Q5XUX0 539 aaPredicted RBP24.34■■□□□ 1.49
AP1S3-202ENST00000396653 NLRP1Q9C000 1473 aa24.33■■□□□ 1.49
AP1S3-202ENST00000396653 MPHOSPH9Q99550 1183 aa24.33■■□□□ 1.49
AP1S3-202ENST00000396653 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.49
AP1S3-202ENST00000396653 PTPRTO14522 1441 aa24.32■■□□□ 1.48
AP1S3-202ENST00000396653 UHRF1BP1Q6BDS2 1440 aa24.32■■□□□ 1.48
AP1S3-202ENST00000396653 PIK3C2BO00750 1634 aa24.32■■□□□ 1.48
AP1S3-202ENST00000396653 TRPM2O94759 1503 aa24.31■■□□□ 1.48
AP1S3-202ENST00000396653 PKD2Q13563 968 aa24.31■■□□□ 1.48
AP1S3-202ENST00000396653 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
AP1S3-202ENST00000396653 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
AP1S3-202ENST00000396653 KDM5AP29375 1690 aaKnown RBP24.29■■□□□ 1.48
AP1S3-202ENST00000396653 A2ML1A8K2U0 1454 aa24.27■■□□□ 1.48
AP1S3-202ENST00000396653 LMTK3Q96Q04 1460 aa24.26■■□□□ 1.47
AP1S3-202ENST00000396653 PLA2R1Q13018 1463 aa24.24■■□□□ 1.47
AP1S3-202ENST00000396653 UBR1Q8IWV7 1749 aa24.24■■□□□ 1.47
AP1S3-202ENST00000396653 SLC52A1Q9NWF4 448 aa24.23■■□□□ 1.47
AP1S3-202ENST00000396653 CLTCL1P53675 1640 aa24.22■■□□□ 1.47
AP1S3-202ENST00000396653 UGGT1Q9NYU2 1555 aa24.21■■□□□ 1.47
AP1S3-202ENST00000396653 ADGRB3O60242 1522 aa24.21■■□□□ 1.47
AP1S3-202ENST00000396653 KIF1BO60333 1816 aa24.19■■□□□ 1.46
AP1S3-202ENST00000396653 TMEM131LA2VDJ0 1609 aa24.17■■□□□ 1.46
AP1S3-202ENST00000396653 FOXD1Q16676 465 aa24.17■■□□□ 1.46
AP1S3-202ENST00000396653 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
AP1S3-202ENST00000396653 DHX57Q6P158 1386 aaKnown RBP24.16■■□□□ 1.46
AP1S3-202ENST00000396653 IDI1Q13907 227 aa24.16■■□□□ 1.46
AP1S3-202ENST00000396653 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
AP1S3-202ENST00000396653 ANKRD30BQ9BXX2 1392 aa24.15■■□□□ 1.46
AP1S3-202ENST00000396653 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
AP1S3-202ENST00000396653 SLIT1O75093 1534 aa24.1■■□□□ 1.45
AP1S3-202ENST00000396653 POLR1AO95602 1720 aaPredicted RBP24.1■■□□□ 1.45
AP1S3-202ENST00000396653 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
AP1S3-202ENST00000396653 ARHGAP23Q9P227 1491 aa24.08■■□□□ 1.45
AP1S3-202ENST00000396653 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
AP1S3-202ENST00000396653 STRCQ7RTU9 1775 aa24.04■■□□□ 1.44
AP1S3-202ENST00000396653 TMEM2Q9UHN6 1383 aa24.03■■□□□ 1.44
AP1S3-202ENST00000396653 SPATA31E1Q6ZUB1 1445 aa24.03■■□□□ 1.44
AP1S3-202ENST00000396653 HSPA2P54652 639 aa24.03■■□□□ 1.44
AP1S3-202ENST00000396653 IFT172Q9UG01 1749 aa24.01■■□□□ 1.43
AP1S3-202ENST00000396653 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
AP1S3-202ENST00000396653 CHGAP10645 457 aaKnown RBP24■■□□□ 1.43
AP1S3-202ENST00000396653 PPLO60437 1756 aa24■■□□□ 1.43
AP1S3-202ENST00000396653 NEXMIFQ5QGS0 1516 aa24■■□□□ 1.43
AP1S3-202ENST00000396653 SCAF11Q99590 1463 aaKnown RBP23.99■■□□□ 1.43
AP1S3-202ENST00000396653 RIMS2Q9UQ26 1411 aa23.98■■□□□ 1.43
AP1S3-202ENST00000396653 MED14O60244 1454 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms