RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ARHGEF40Q8TER5 1519 aa22.63■■□□□ 1.21
VAMP1-202ENST00000396308 IQGAP3Q86VI3 1631 aa22.61■■□□□ 1.21
VAMP1-202ENST00000396308 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
VAMP1-202ENST00000396308 REREQ9P2R6 1566 aa22.59■■□□□ 1.21
VAMP1-202ENST00000396308 NUP155O75694 1391 aa22.58■■□□□ 1.21
VAMP1-202ENST00000396308 KANK1Q14678 1352 aa22.57■■□□□ 1.2
VAMP1-202ENST00000396308 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
VAMP1-202ENST00000396308 FAM135AQ9P2D6 1515 aa22.57■■□□□ 1.2
VAMP1-202ENST00000396308 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
VAMP1-202ENST00000396308 ATP10AO60312 1499 aa22.56■■□□□ 1.2
VAMP1-202ENST00000396308 PZPP20742 1482 aa22.55■■□□□ 1.2
VAMP1-202ENST00000396308 COL17A1Q9UMD9 1497 aaPredicted RBP22.55■■□□□ 1.2
VAMP1-202ENST00000396308 SLC4A1APQ9BWU0 796 aaKnown RBP22.55■■□□□ 1.2
VAMP1-202ENST00000396308 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
VAMP1-202ENST00000396308 KIF3BO15066 747 aa22.52■■□□□ 1.2
VAMP1-202ENST00000396308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.51■■□□□ 1.19
VAMP1-202ENST00000396308 TET3O43151 1660 aa22.51■■□□□ 1.19
VAMP1-202ENST00000396308 ZC3H13Q5T200 1668 aaKnown RBP22.5■■□□□ 1.19
VAMP1-202ENST00000396308 MROH1Q8NDA8 1641 aa22.49■■□□□ 1.19
VAMP1-202ENST00000396308 AGLP35573 1532 aa22.48■■□□□ 1.19
VAMP1-202ENST00000396308 KDM4FA0A1W2PPD8 638 aa22.48■■□□□ 1.19
VAMP1-202ENST00000396308 CEP152O94986 1710 aa22.48■■□□□ 1.19
VAMP1-202ENST00000396308 VWDEQ8N2E2 1590 aa22.46■■□□□ 1.19
VAMP1-202ENST00000396308 PKD2Q13563 968 aa22.42■■□□□ 1.18
VAMP1-202ENST00000396308 E9PCH4 1651 aa22.41■■□□□ 1.18
VAMP1-202ENST00000396308 LMTK2Q8IWU2 1503 aa22.41■■□□□ 1.18
VAMP1-202ENST00000396308 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
VAMP1-202ENST00000396308 EFCAB6Q5THR3 1501 aa22.4■■□□□ 1.18
VAMP1-202ENST00000396308 SPHKAPQ2M3C7 1700 aa22.39■■□□□ 1.17
VAMP1-202ENST00000396308 GGT6Q6P531 493 aa22.38■■□□□ 1.17
VAMP1-202ENST00000396308 ABCC3O15438 1527 aa22.37■■□□□ 1.17
VAMP1-202ENST00000396308 SIGLEC1Q9BZZ2 1709 aa22.36■■□□□ 1.17
VAMP1-202ENST00000396308 ANKRD30BQ9BXX2 1392 aa22.35■■□□□ 1.17
VAMP1-202ENST00000396308 RPRD2Q5VT52 1461 aaKnown RBP22.34■■□□□ 1.17
VAMP1-202ENST00000396308 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.17
VAMP1-202ENST00000396308 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
VAMP1-202ENST00000396308 FOXD1Q16676 465 aa22.33■■□□□ 1.17
VAMP1-202ENST00000396308 TONSLQ96HA7 1378 aa22.33■■□□□ 1.17
VAMP1-202ENST00000396308 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
VAMP1-202ENST00000396308 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
VAMP1-202ENST00000396308 CLTCQ00610 1675 aaKnown RBP22.31■■□□□ 1.16
VAMP1-202ENST00000396308 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
VAMP1-202ENST00000396308 TRPM2O94759 1503 aa22.3■■□□□ 1.16
VAMP1-202ENST00000396308 CCDC144AA2RUR9 1427 aa22.29■■□□□ 1.16
VAMP1-202ENST00000396308 SIN3AQ96ST3 1273 aa22.28■■□□□ 1.16
VAMP1-202ENST00000396308 ESF1Q9H501 851 aaKnown RBP22.28■■□□□ 1.16
VAMP1-202ENST00000396308 ILDR1Q86SU0 546 aaPredicted RBP22.27■■□□□ 1.16
VAMP1-202ENST00000396308 MROH2AA6NES4 1674 aa22.25■■□□□ 1.15
VAMP1-202ENST00000396308 FER1L4A9Z1Z3 1794 aa22.25■■□□□ 1.15
VAMP1-202ENST00000396308 ARHGAP31Q2M1Z3 1444 aa22.24■■□□□ 1.15
VAMP1-202ENST00000396308 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
VAMP1-202ENST00000396308 KIF1BO60333 1816 aa22.22■■□□□ 1.15
VAMP1-202ENST00000396308 CFAP65Q6ZU64 1925 aaKnown RBP22.22■■□□□ 1.15
VAMP1-202ENST00000396308 MLECQ14165 292 aa22.22■■□□□ 1.15
VAMP1-202ENST00000396308 PREX1Q8TCU6 1659 aa22.22■■□□□ 1.15
VAMP1-202ENST00000396308 NPATQ14207 1427 aa22.22■■□□□ 1.15
VAMP1-202ENST00000396308 PTPRTO14522 1441 aa22.21■■□□□ 1.15
VAMP1-202ENST00000396308 CLTCL1P53675 1640 aa22.2■■□□□ 1.14
VAMP1-202ENST00000396308 PLA2R1Q13018 1463 aa22.17■■□□□ 1.14
VAMP1-202ENST00000396308 NEURL4Q96JN8 1562 aa22.13■■□□□ 1.13
VAMP1-202ENST00000396308 PIK3C2BO00750 1634 aa22.12■■□□□ 1.13
VAMP1-202ENST00000396308 NOS1P29475 1434 aa22.12■■□□□ 1.13
VAMP1-202ENST00000396308 SYNMO15061 1565 aa22.12■■□□□ 1.13
VAMP1-202ENST00000396308 ERVK-7P63135 1459 aa22.11■■□□□ 1.13
VAMP1-202ENST00000396308 SPATA31D1Q6ZQQ2 1576 aa22.09■■□□□ 1.13
VAMP1-202ENST00000396308 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.12
VAMP1-202ENST00000396308 C3P01024 1663 aa22.07■■□□□ 1.12
VAMP1-202ENST00000396308 RIMS1Q86UR5 1692 aaKnown RBP22.07■■□□□ 1.12
VAMP1-202ENST00000396308 MADDQ8WXG6 1647 aa22.07■■□□□ 1.12
VAMP1-202ENST00000396308 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
VAMP1-202ENST00000396308 ZMYM3Q14202 1370 aa22.06■■□□□ 1.12
VAMP1-202ENST00000396308 ADAMTSL3P82987 1691 aa22.05■■□□□ 1.12
VAMP1-202ENST00000396308 ADGRB3O60242 1522 aa22.05■■□□□ 1.12
VAMP1-202ENST00000396308 PPP1R15AO75807 674 aaPredicted RBP22.04■■□□□ 1.12
VAMP1-202ENST00000396308 SLC52A1Q9NWF4 448 aa22.03■■□□□ 1.12
VAMP1-202ENST00000396308 SPATA31E1Q6ZUB1 1445 aa22.03■■□□□ 1.12
VAMP1-202ENST00000396308 IFT172Q9UG01 1749 aa22.01■■□□□ 1.11
VAMP1-202ENST00000396308 RGL3Q3MIN7 710 aa21.99■■□□□ 1.11
VAMP1-202ENST00000396308 MYO5BQ9ULV0 1848 aa21.99■■□□□ 1.11
VAMP1-202ENST00000396308 PPLO60437 1756 aa21.98■■□□□ 1.11
VAMP1-202ENST00000396308 CHGAP10645 457 aaKnown RBP21.98■■□□□ 1.11
VAMP1-202ENST00000396308 TNRQ92752 1358 aa21.98■■□□□ 1.11
VAMP1-202ENST00000396308 KDM5AP29375 1690 aaKnown RBP21.98■■□□□ 1.11
VAMP1-202ENST00000396308 DCAF11Q8TEB1 546 aa21.97■■□□□ 1.11
VAMP1-202ENST00000396308 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
VAMP1-202ENST00000396308 TMEM131LA2VDJ0 1609 aa21.96■■□□□ 1.11
VAMP1-202ENST00000396308 ZNF326Q5BKZ1 582 aaKnown RBP21.95■■□□□ 1.1
VAMP1-202ENST00000396308 FBXO31Q5XUX0 539 aaPredicted RBP21.95■■□□□ 1.1
VAMP1-202ENST00000396308 UHRF1BP1Q6BDS2 1440 aa21.95■■□□□ 1.1
VAMP1-202ENST00000396308 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
VAMP1-202ENST00000396308 MYOM2P54296 1465 aa21.94■■□□□ 1.1
VAMP1-202ENST00000396308 NLRP1Q9C000 1473 aa21.93■■□□□ 1.1
VAMP1-202ENST00000396308 KDM2AQ9Y2K7 1162 aa21.92■■□□□ 1.1
VAMP1-202ENST00000396308 TRPM1Q7Z4N2 1603 aa21.91■■□□□ 1.1
VAMP1-202ENST00000396308 MYO3AQ8NEV4 1616 aa21.91■■□□□ 1.1
VAMP1-202ENST00000396308 RPGRIP1LQ68CZ1 1315 aa21.91■■□□□ 1.1
VAMP1-202ENST00000396308 IDI1Q13907 227 aa21.9■■□□□ 1.1
VAMP1-202ENST00000396308 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
VAMP1-202ENST00000396308 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.1
VAMP1-202ENST00000396308 UBR1Q8IWV7 1749 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms