RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 ABCA9Q8IUA7 1624 aa19.2■□□□□ 0.66
CCHCR1-203ENST00000396268 NBR1Q14596 966 aa19.2■□□□□ 0.66
CCHCR1-203ENST00000396268 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
CCHCR1-203ENST00000396268 POLR3GLQ9BT43 218 aa19.2■□□□□ 0.66
CCHCR1-203ENST00000396268 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
CCHCR1-203ENST00000396268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.66
CCHCR1-203ENST00000396268 B4GALNT3Q6L9W6 998 aa19.18■□□□□ 0.66
CCHCR1-203ENST00000396268 PLEKHH2Q8IVE3 1493 aa19.17■□□□□ 0.66
CCHCR1-203ENST00000396268 SENP3-EIF4A1A0A087X0R7 540 aa19.17■□□□□ 0.66
CCHCR1-203ENST00000396268 ZNF326Q5BKZ1 582 aaKnown RBP19.17■□□□□ 0.66
CCHCR1-203ENST00000396268 PPP4R2Q9NY27 417 aa19.17■□□□□ 0.66
CCHCR1-203ENST00000396268 KIF7Q2M1P5 1343 aa19.16■□□□□ 0.66
CCHCR1-203ENST00000396268 RPRD2Q5VT52 1461 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-203ENST00000396268 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.65
CCHCR1-203ENST00000396268 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
CCHCR1-203ENST00000396268 SCAPERQ9BY12 1400 aa19.13■□□□□ 0.65
CCHCR1-203ENST00000396268 FANCIQ9NVI1 1328 aa19.13■□□□□ 0.65
CCHCR1-203ENST00000396268 MYT1LQ9UL68 1186 aa19.13■□□□□ 0.65
CCHCR1-203ENST00000396268 MAST1Q9Y2H9 1570 aa19.13■□□□□ 0.65
CCHCR1-203ENST00000396268 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
CCHCR1-203ENST00000396268 ZBED9Q6R2W3 1325 aa19.12■□□□□ 0.65
CCHCR1-203ENST00000396268 ERICH6BQ5W0A0 696 aa19.12■□□□□ 0.65
CCHCR1-203ENST00000396268 CD109Q6YHK3 1445 aa19.12■□□□□ 0.65
CCHCR1-203ENST00000396268 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
CCHCR1-203ENST00000396268 TEX14Q8IWB6 1497 aa19.1■□□□□ 0.65
CCHCR1-203ENST00000396268 PLXNC1O60486 1568 aa19.07■□□□□ 0.64
CCHCR1-203ENST00000396268 ZFYVE16Q7Z3T8 1539 aa19.07■□□□□ 0.64
CCHCR1-203ENST00000396268 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
CCHCR1-203ENST00000396268 FAM135AQ9P2D6 1515 aa19.06■□□□□ 0.64
CCHCR1-203ENST00000396268 DUOX2Q9NRD8 1548 aa19.04■□□□□ 0.64
CCHCR1-203ENST00000396268 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
CCHCR1-203ENST00000396268 PAK3O75914 559 aaPredicted RBP19.03■□□□□ 0.64
CCHCR1-203ENST00000396268 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
CCHCR1-203ENST00000396268 ATP7AQ04656 1500 aa19.01■□□□□ 0.63
CCHCR1-203ENST00000396268 USP47Q96K76 1375 aa19■□□□□ 0.63
CCHCR1-203ENST00000396268 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
CCHCR1-203ENST00000396268 UNC13BO14795 1591 aa18.99■□□□□ 0.63
CCHCR1-203ENST00000396268 INO80Q9ULG1 1556 aaPredicted RBP18.99■□□□□ 0.63
CCHCR1-203ENST00000396268 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
CCHCR1-203ENST00000396268 RTEL1-TNFRSF6BF6WH68 1400 aa18.98■□□□□ 0.63
CCHCR1-203ENST00000396268 KIF3BO15066 747 aa18.97■□□□□ 0.63
CCHCR1-203ENST00000396268 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
CCHCR1-203ENST00000396268 PLA2R1Q13018 1463 aa18.95■□□□□ 0.62
CCHCR1-203ENST00000396268 DHX29Q7Z478 1369 aaKnown RBP18.95■□□□□ 0.62
CCHCR1-203ENST00000396268 POGZQ7Z3K3 1410 aa18.94■□□□□ 0.62
CCHCR1-203ENST00000396268 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
CCHCR1-203ENST00000396268 TMC1Q8TDI8 760 aa18.93■□□□□ 0.62
CCHCR1-203ENST00000396268 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-203ENST00000396268 ZNF518AQ6AHZ1 1483 aa18.93■□□□□ 0.62
CCHCR1-203ENST00000396268 NUDCQ9Y266 331 aa18.93■□□□□ 0.62
CCHCR1-203ENST00000396268 CARD11Q9BXL7 1154 aa18.93■□□□□ 0.62
CCHCR1-203ENST00000396268 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
CCHCR1-203ENST00000396268 RGL3Q3MIN7 710 aa18.92■□□□□ 0.62
CCHCR1-203ENST00000396268 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
CCHCR1-203ENST00000396268 MAGI2Q86UL8 1455 aa18.92■□□□□ 0.62
CCHCR1-203ENST00000396268 MAP3K4Q9Y6R4 1608 aa18.91■□□□□ 0.62
CCHCR1-203ENST00000396268 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
CCHCR1-203ENST00000396268 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
CCHCR1-203ENST00000396268 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-203ENST00000396268 DIP2BQ9P265 1576 aa18.89■□□□□ 0.61
CCHCR1-203ENST00000396268 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
CCHCR1-203ENST00000396268 DCAF11Q8TEB1 546 aa18.88■□□□□ 0.61
CCHCR1-203ENST00000396268 POLR1AO95602 1720 aaPredicted RBP18.87■□□□□ 0.61
CCHCR1-203ENST00000396268 KDM5CP41229 1560 aa18.87■□□□□ 0.61
CCHCR1-203ENST00000396268 CFAP74Q9C0B2 1584 aa18.87■□□□□ 0.61
CCHCR1-203ENST00000396268 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
CCHCR1-203ENST00000396268 CCDC144AA2RUR9 1427 aa18.86■□□□□ 0.61
CCHCR1-203ENST00000396268 NEO1Q92859 1461 aa18.86■□□□□ 0.61
CCHCR1-203ENST00000396268 ST20-MTHFSA0A0A6YYL1 179 aa18.86■□□□□ 0.61
CCHCR1-203ENST00000396268 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
CCHCR1-203ENST00000396268 GGT6Q6P531 493 aa18.85■□□□□ 0.61
CCHCR1-203ENST00000396268 ARID4BQ4LE39 1312 aaPredicted RBP18.85■□□□□ 0.61
CCHCR1-203ENST00000396268 FRMPD1Q5SYB0 1578 aa18.84■□□□□ 0.61
CCHCR1-203ENST00000396268 A2MP01023 1474 aa18.84■□□□□ 0.61
CCHCR1-203ENST00000396268 E9PCH4 1651 aa18.84■□□□□ 0.61
CCHCR1-203ENST00000396268 MROH1Q8NDA8 1641 aa18.84■□□□□ 0.61
CCHCR1-203ENST00000396268 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-203ENST00000396268 ABCA6Q8N139 1617 aa18.83■□□□□ 0.61
CCHCR1-203ENST00000396268 GLI2P10070 1586 aa18.83■□□□□ 0.61
CCHCR1-203ENST00000396268 YEATS2Q9ULM3 1422 aa18.83■□□□□ 0.61
CCHCR1-203ENST00000396268 HECW2Q9P2P5 1572 aa18.83■□□□□ 0.6
CCHCR1-203ENST00000396268 DEPDC5O75140 1603 aa18.83■□□□□ 0.6
CCHCR1-203ENST00000396268 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
CCHCR1-203ENST00000396268 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
CCHCR1-203ENST00000396268 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
CCHCR1-203ENST00000396268 PPRC1Q5VV67 1664 aaKnown RBP18.8■□□□□ 0.6
CCHCR1-203ENST00000396268 RICTORQ6R327 1708 aa18.8■□□□□ 0.6
CCHCR1-203ENST00000396268 ATP10AO60312 1499 aa18.79■□□□□ 0.6
CCHCR1-203ENST00000396268 RTL5Q5HYW3 569 aaPredicted RBP18.79■□□□□ 0.6
CCHCR1-203ENST00000396268 RNF123Q5XPI4 1314 aa18.78■□□□□ 0.6
CCHCR1-203ENST00000396268 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
CCHCR1-203ENST00000396268 KANK1Q14678 1352 aa18.77■□□□□ 0.6
CCHCR1-203ENST00000396268 VWDEQ8N2E2 1590 aa18.77■□□□□ 0.6
CCHCR1-203ENST00000396268 PRDM15P57071 1507 aaPredicted RBP18.76■□□□□ 0.59
CCHCR1-203ENST00000396268 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
CCHCR1-203ENST00000396268 IL27Q8NEV9 243 aa18.76■□□□□ 0.59
CCHCR1-203ENST00000396268 UHRF1BP1Q6BDS2 1440 aa18.76■□□□□ 0.59
CCHCR1-203ENST00000396268 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
CCHCR1-203ENST00000396268 ANP32AP39687 249 aaKnown RBP18.76■□□□□ 0.59
CCHCR1-203ENST00000396268 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms