RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 RGS3P49796 1198 aa23.84■■□□□ 1.41
HERPUD2-202ENST00000396081 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
HERPUD2-202ENST00000396081 ANKRD30AQ9BXX3 1397 aa23.83■■□□□ 1.4
HERPUD2-202ENST00000396081 PRG4Q92954 1404 aaPredicted RBP23.82■■□□□ 1.4
HERPUD2-202ENST00000396081 ANKRD50Q9ULJ7 1429 aa23.81■■□□□ 1.4
HERPUD2-202ENST00000396081 CAMSAP2Q08AD1 1489 aa23.8■■□□□ 1.4
HERPUD2-202ENST00000396081 FRAT2O75474 233 aaPredicted RBP23.79■■□□□ 1.4
HERPUD2-202ENST00000396081 UHRF1BP1Q6BDS2 1440 aa23.78■■□□□ 1.4
HERPUD2-202ENST00000396081 PARD3Q8TEW0 1356 aa23.78■■□□□ 1.4
HERPUD2-202ENST00000396081 PDS5BQ9NTI5 1447 aa23.77■■□□□ 1.4
HERPUD2-202ENST00000396081 FAM161AQ3B820 660 aa23.77■■□□□ 1.4
HERPUD2-202ENST00000396081 NBPF1Q3BBV0 1214 aa23.76■■□□□ 1.39
HERPUD2-202ENST00000396081 PANK3Q9H999 370 aa23.75■■□□□ 1.39
HERPUD2-202ENST00000396081 CENPQQ7L2Z9 268 aaPredicted RBP23.75■■□□□ 1.39
HERPUD2-202ENST00000396081 PER1O15534 1290 aaPredicted RBP23.74■■□□□ 1.39
HERPUD2-202ENST00000396081 NUP153P49790 1475 aaKnown RBP23.74■■□□□ 1.39
HERPUD2-202ENST00000396081 ADAMTS8Q9UP79 889 aa23.72■■□□□ 1.39
HERPUD2-202ENST00000396081 TSPY4P0CV99 314 aa23.72■■□□□ 1.39
HERPUD2-202ENST00000396081 TSPY10P0CW01 314 aa23.72■■□□□ 1.39
HERPUD2-202ENST00000396081 KIAA0586Q9BVV6 1533 aa23.71■■□□□ 1.39
HERPUD2-202ENST00000396081 C8orf34Q49A92 452 aa23.7■■□□□ 1.39
HERPUD2-202ENST00000396081 KDM2BQ8NHM5 1336 aa23.7■■□□□ 1.38
HERPUD2-202ENST00000396081 TROQ12816 1431 aaPredicted RBP23.68■■□□□ 1.38
HERPUD2-202ENST00000396081 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.38
HERPUD2-202ENST00000396081 GPATCH8Q9UKJ3 1502 aaKnown RBP23.67■■□□□ 1.38
HERPUD2-202ENST00000396081 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.65■■□□□ 1.38
HERPUD2-202ENST00000396081 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
HERPUD2-202ENST00000396081 UBE2Q2Q8WVN8 375 aa23.63■■□□□ 1.37
HERPUD2-202ENST00000396081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.63■■□□□ 1.37
HERPUD2-202ENST00000396081 ARHGEF12Q9NZN5 1544 aa23.63■■□□□ 1.37
HERPUD2-202ENST00000396081 HNRNPMP52272 730 aaKnown RBP eCLIP23.62■■□□□ 1.372e-6■■■■■ 28.7
HERPUD2-202ENST00000396081 DISP3Q9P2K9 1392 aa23.62■■□□□ 1.37
HERPUD2-202ENST00000396081 DUSP27Q5VZP5 1158 aa23.61■■□□□ 1.37
HERPUD2-202ENST00000396081 ADGRL2O95490 1459 aa23.61■■□□□ 1.37
HERPUD2-202ENST00000396081 BLMP54132 1417 aaPredicted RBP23.61■■□□□ 1.37
HERPUD2-202ENST00000396081 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
HERPUD2-202ENST00000396081 ARXQ96QS3 562 aa23.6■■□□□ 1.37
HERPUD2-202ENST00000396081 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
HERPUD2-202ENST00000396081 ADGBQ8N7X0 1667 aa23.59■■□□□ 1.37
HERPUD2-202ENST00000396081 TMF1P82094 1093 aa23.59■■□□□ 1.37
HERPUD2-202ENST00000396081 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
HERPUD2-202ENST00000396081 DISP1Q96F81 1524 aa23.58■■□□□ 1.37
HERPUD2-202ENST00000396081 RAPGEF6Q8TEU7 1601 aa23.58■■□□□ 1.37
HERPUD2-202ENST00000396081 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.37
HERPUD2-202ENST00000396081 SLKQ9H2G2 1235 aaPredicted RBP23.58■■□□□ 1.36
HERPUD2-202ENST00000396081 PLEKHD1A6NEE1 506 aa23.57■■□□□ 1.36
HERPUD2-202ENST00000396081 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
HERPUD2-202ENST00000396081 CCDC146Q8IYE0 955 aa23.57■■□□□ 1.36
HERPUD2-202ENST00000396081 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
HERPUD2-202ENST00000396081 E9PCH4 1651 aa23.56■■□□□ 1.36
HERPUD2-202ENST00000396081 TESK2Q96S53 571 aa23.56■■□□□ 1.36
HERPUD2-202ENST00000396081 KNSTRNQ9Y448 316 aa23.56■■□□□ 1.36
HERPUD2-202ENST00000396081 PBRM1Q86U86 1689 aa23.55■■□□□ 1.36
HERPUD2-202ENST00000396081 POGKQ9P215 609 aa23.55■■□□□ 1.36
HERPUD2-202ENST00000396081 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
HERPUD2-202ENST00000396081 KIAA0556O60303 1618 aa23.55■■□□□ 1.36
HERPUD2-202ENST00000396081 FBLN2P98095 1184 aa23.55■■□□□ 1.36
HERPUD2-202ENST00000396081 ZMYM4Q5VZL5 1548 aa23.53■■□□□ 1.36
HERPUD2-202ENST00000396081 PRAG1Q86YV5 1406 aa23.53■■□□□ 1.36
HERPUD2-202ENST00000396081 BCAR3O75815 825 aa23.52■■□□□ 1.36
HERPUD2-202ENST00000396081 FAM43AQ8N2R8 423 aa23.52■■□□□ 1.36
HERPUD2-202ENST00000396081 PPP2R1AP30153 589 aa23.51■■□□□ 1.35
HERPUD2-202ENST00000396081 PLEKHH2Q8IVE3 1493 aa23.5■■□□□ 1.35
HERPUD2-202ENST00000396081 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
HERPUD2-202ENST00000396081 ERBINQ96RT1 1412 aa23.49■■□□□ 1.35
HERPUD2-202ENST00000396081 RSPH6AQ9H0K4 717 aa23.49■■□□□ 1.35
HERPUD2-202ENST00000396081 COL17A1Q9UMD9 1497 aaPredicted RBP23.48■■□□□ 1.35
HERPUD2-202ENST00000396081 CANXP27824 592 aaKnown RBP23.48■■□□□ 1.35
HERPUD2-202ENST00000396081 IGHDP01880 384 aa23.47■■□□□ 1.35
HERPUD2-202ENST00000396081 SEC24BO95487 1268 aa23.46■■□□□ 1.35
HERPUD2-202ENST00000396081 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
HERPUD2-202ENST00000396081 APAF1O14727 1248 aa23.46■■□□□ 1.35
HERPUD2-202ENST00000396081 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
HERPUD2-202ENST00000396081 BECN1Q14457 450 aa23.46■■□□□ 1.35
HERPUD2-202ENST00000396081 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
HERPUD2-202ENST00000396081 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
HERPUD2-202ENST00000396081 INSRP06213 1382 aa23.45■■□□□ 1.34
HERPUD2-202ENST00000396081 CROCC2H7BZ55 1655 aa23.43■■□□□ 1.34
HERPUD2-202ENST00000396081 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
HERPUD2-202ENST00000396081 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
HERPUD2-202ENST00000396081 SPRYD3Q8NCJ5 442 aa23.41■■□□□ 1.34
HERPUD2-202ENST00000396081 COG6Q9Y2V7 657 aa23.41■■□□□ 1.34
HERPUD2-202ENST00000396081 ZNF521Q96K83 1311 aa23.4■■□□□ 1.34
HERPUD2-202ENST00000396081 USP19O94966 1318 aa23.4■■□□□ 1.34
HERPUD2-202ENST00000396081 PANK1Q8TE04 598 aa23.39■■□□□ 1.33
HERPUD2-202ENST00000396081 TRPM1Q7Z4N2 1603 aa23.39■■□□□ 1.33
HERPUD2-202ENST00000396081 GPRASP1Q5JY77 1395 aa23.38■■□□□ 1.33
HERPUD2-202ENST00000396081 A2MP01023 1474 aa23.38■■□□□ 1.33
HERPUD2-202ENST00000396081 RRAGDQ9NQL2 400 aaPredicted RBP23.37■■□□□ 1.33
HERPUD2-202ENST00000396081 FAM135AQ9P2D6 1515 aa23.37■■□□□ 1.33
HERPUD2-202ENST00000396081 PTPRGP23470 1445 aa23.36■■□□□ 1.33
HERPUD2-202ENST00000396081 GZF1Q9H116 711 aaPredicted RBP23.36■■□□□ 1.33
HERPUD2-202ENST00000396081 AMER1Q5JTC6 1135 aaPredicted RBP23.36■■□□□ 1.33
HERPUD2-202ENST00000396081 L1TD1Q5T7N2 865 aaKnown RBP23.34■■□□□ 1.33
HERPUD2-202ENST00000396081 UPF2Q9HAU5 1272 aaKnown RBP23.34■■□□□ 1.33
HERPUD2-202ENST00000396081 SHANK2Q9UPX8 1470 aa23.34■■□□□ 1.33
HERPUD2-202ENST00000396081 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
HERPUD2-202ENST00000396081 DMRT2Q9Y5R5 561 aa23.34■■□□□ 1.33
HERPUD2-202ENST00000396081 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
HERPUD2-202ENST00000396081 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms