RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 MAST1Q9Y2H9 1570 aa20.95■□□□□ 0.94
RTFDC1-203ENST00000395881 ADGRL2O95490 1459 aa20.94■□□□□ 0.94
RTFDC1-203ENST00000395881 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
RTFDC1-203ENST00000395881 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
RTFDC1-203ENST00000395881 RRP7BPQ9NSQ0 103 aa20.89■□□□□ 0.94
RTFDC1-203ENST00000395881 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
RTFDC1-203ENST00000395881 CHIC2Q9UKJ5 165 aa20.89■□□□□ 0.93
RTFDC1-203ENST00000395881 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
RTFDC1-203ENST00000395881 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
RTFDC1-203ENST00000395881 CEBPAP49715 358 aaPredicted RBP20.86■□□□□ 0.93
RTFDC1-203ENST00000395881 GGT6Q6P531 493 aa20.85■□□□□ 0.93
RTFDC1-203ENST00000395881 KIF3BO15066 747 aa20.84■□□□□ 0.93
RTFDC1-203ENST00000395881 C3P01024 1663 aa20.83■□□□□ 0.93
RTFDC1-203ENST00000395881 ESF1Q9H501 851 aaKnown RBP20.83■□□□□ 0.92
RTFDC1-203ENST00000395881 ANKRD30AQ9BXX3 1397 aa20.82■□□□□ 0.92
RTFDC1-203ENST00000395881 CNTLNQ9NXG0 1405 aa20.82■□□□□ 0.92
RTFDC1-203ENST00000395881 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
RTFDC1-203ENST00000395881 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
RTFDC1-203ENST00000395881 KIF15Q9NS87 1388 aa20.79■□□□□ 0.92
RTFDC1-203ENST00000395881 DUOX2Q9NRD8 1548 aa20.79■□□□□ 0.92
RTFDC1-203ENST00000395881 SIN3AQ96ST3 1273 aa20.79■□□□□ 0.92
RTFDC1-203ENST00000395881 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
RTFDC1-203ENST00000395881 ZMYM3Q14202 1370 aa20.77■□□□□ 0.92
RTFDC1-203ENST00000395881 EIF2AK4Q9P2K8 1649 aaKnown RBP20.77■□□□□ 0.92
RTFDC1-203ENST00000395881 SETD1BQ9UPS6 1966 aaKnown RBP20.77■□□□□ 0.92
RTFDC1-203ENST00000395881 LMTK3Q96Q04 1460 aa20.76■□□□□ 0.91
RTFDC1-203ENST00000395881 RNF17Q9BXT8 1623 aaKnown RBP20.76■□□□□ 0.91
RTFDC1-203ENST00000395881 MPHOSPH9Q99550 1183 aa20.75■□□□□ 0.91
RTFDC1-203ENST00000395881 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
RTFDC1-203ENST00000395881 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
RTFDC1-203ENST00000395881 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
RTFDC1-203ENST00000395881 PPP1R15AO75807 674 aaPredicted RBP20.73■□□□□ 0.91
RTFDC1-203ENST00000395881 MROH1Q8NDA8 1641 aa20.72■□□□□ 0.91
RTFDC1-203ENST00000395881 PREX1Q8TCU6 1659 aa20.72■□□□□ 0.91
RTFDC1-203ENST00000395881 ERBINQ96RT1 1412 aa20.72■□□□□ 0.91
RTFDC1-203ENST00000395881 ANKRD50Q9ULJ7 1429 aa20.71■□□□□ 0.91
RTFDC1-203ENST00000395881 KDM5DQ9BY66 1539 aa20.7■□□□□ 0.9
RTFDC1-203ENST00000395881 WASHC2CQ9Y4E1 1318 aa20.7■□□□□ 0.9
RTFDC1-203ENST00000395881 FAM135AQ9P2D6 1515 aa20.7■□□□□ 0.9
RTFDC1-203ENST00000395881 PZPP20742 1482 aa20.67■□□□□ 0.9
RTFDC1-203ENST00000395881 HSPA2P54652 639 aa20.67■□□□□ 0.9
RTFDC1-203ENST00000395881 NPATQ14207 1427 aa20.66■□□□□ 0.9
RTFDC1-203ENST00000395881 ABCC3O15438 1527 aa20.66■□□□□ 0.9
RTFDC1-203ENST00000395881 ANKRD30BQ9BXX2 1392 aa20.66■□□□□ 0.9
RTFDC1-203ENST00000395881 DEPDC5O75140 1603 aa20.65■□□□□ 0.9
RTFDC1-203ENST00000395881 CEP152O94986 1710 aa20.65■□□□□ 0.9
RTFDC1-203ENST00000395881 ZC3H13Q5T200 1668 aaKnown RBP20.64■□□□□ 0.89
RTFDC1-203ENST00000395881 PRDM15P57071 1507 aaPredicted RBP20.64■□□□□ 0.89
RTFDC1-203ENST00000395881 UHRF1BP1Q6BDS2 1440 aa20.64■□□□□ 0.89
RTFDC1-203ENST00000395881 RPRD2Q5VT52 1461 aaKnown RBP20.63■□□□□ 0.89
RTFDC1-203ENST00000395881 FBXO31Q5XUX0 539 aaPredicted RBP20.63■□□□□ 0.89
RTFDC1-203ENST00000395881 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
RTFDC1-203ENST00000395881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.892e-8■■■□□ 14.7
RTFDC1-203ENST00000395881 CFAP65Q6ZU64 1925 aaKnown RBP20.59■□□□□ 0.89
RTFDC1-203ENST00000395881 CAMSAP1Q5T5Y3 1602 aa20.59■□□□□ 0.89
RTFDC1-203ENST00000395881 VWDEQ8N2E2 1590 aa20.58■□□□□ 0.89
RTFDC1-203ENST00000395881 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.88
RTFDC1-203ENST00000395881 KANK1Q14678 1352 aa20.55■□□□□ 0.88
RTFDC1-203ENST00000395881 TNRQ92752 1358 aa20.55■□□□□ 0.88
RTFDC1-203ENST00000395881 UNC13BO14795 1591 aa20.54■□□□□ 0.88
RTFDC1-203ENST00000395881 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
RTFDC1-203ENST00000395881 LMTK2Q8IWU2 1503 aa20.53■□□□□ 0.88
RTFDC1-203ENST00000395881 STRCQ7RTU9 1775 aa20.53■□□□□ 0.88
RTFDC1-203ENST00000395881 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
RTFDC1-203ENST00000395881 NUP155O75694 1391 aa20.52■□□□□ 0.88
RTFDC1-203ENST00000395881 ARHGAP31Q2M1Z3 1444 aa20.52■□□□□ 0.88
RTFDC1-203ENST00000395881 SPATA31D1Q6ZQQ2 1576 aa20.52■□□□□ 0.88
RTFDC1-203ENST00000395881 ERVK-7P63135 1459 aa20.51■□□□□ 0.87
RTFDC1-203ENST00000395881 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
RTFDC1-203ENST00000395881 FOXD1Q16676 465 aa20.48■□□□□ 0.87
RTFDC1-203ENST00000395881 PKD2Q13563 968 aa20.47■□□□□ 0.87
RTFDC1-203ENST00000395881 EFCAB6Q5THR3 1501 aa20.47■□□□□ 0.87
RTFDC1-203ENST00000395881 MIER1Q8N108 512 aa20.46■□□□□ 0.87
RTFDC1-203ENST00000395881 L3MBTL2Q969R5 705 aa20.46■□□□□ 0.87
RTFDC1-203ENST00000395881 NLRP1Q9C000 1473 aa20.45■□□□□ 0.86
RTFDC1-203ENST00000395881 IQGAP3Q86VI3 1631 aa20.45■□□□□ 0.86
RTFDC1-203ENST00000395881 TET3O43151 1660 aa20.45■□□□□ 0.86
RTFDC1-203ENST00000395881 PLA2R1Q13018 1463 aa20.4■□□□□ 0.86
RTFDC1-203ENST00000395881 NCKAP5LQ9HCH0 1330 aa20.4■□□□□ 0.86
RTFDC1-203ENST00000395881 UGGT1Q9NYU2 1555 aa20.39■□□□□ 0.86
RTFDC1-203ENST00000395881 E9PCH4 1651 aa20.39■□□□□ 0.85
RTFDC1-203ENST00000395881 NOS1P29475 1434 aa20.39■□□□□ 0.85
RTFDC1-203ENST00000395881 SYNMO15061 1565 aa20.39■□□□□ 0.85
RTFDC1-203ENST00000395881 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
RTFDC1-203ENST00000395881 UBR1Q8IWV7 1749 aa20.37■□□□□ 0.85
RTFDC1-203ENST00000395881 PTPRTO14522 1441 aa20.37■□□□□ 0.85
RTFDC1-203ENST00000395881 THEMISQ8N1K5 641 aaPredicted RBP20.37■□□□□ 0.85
RTFDC1-203ENST00000395881 PIK3C2BO00750 1634 aa20.36■□□□□ 0.85
RTFDC1-203ENST00000395881 IDI1Q13907 227 aa20.34■□□□□ 0.85
RTFDC1-203ENST00000395881 POLR1AO95602 1720 aaPredicted RBP20.33■□□□□ 0.85
RTFDC1-203ENST00000395881 CENPBP07199 599 aaPredicted RBP20.33■□□□□ 0.84
RTFDC1-203ENST00000395881 EIF4G2P78344 907 aaKnown RBP eCLIP20.32■□□□□ 0.84
RTFDC1-203ENST00000395881 NEURL4Q96JN8 1562 aa20.31■□□□□ 0.84
RTFDC1-203ENST00000395881 ANKLE2Q86XL3 938 aa20.29■□□□□ 0.84
RTFDC1-203ENST00000395881 KDM5AP29375 1690 aaKnown RBP20.29■□□□□ 0.84
RTFDC1-203ENST00000395881 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
RTFDC1-203ENST00000395881 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
RTFDC1-203ENST00000395881 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
RTFDC1-203ENST00000395881 ARHGAP23Q9P227 1491 aa20.27■□□□□ 0.83
RTFDC1-203ENST00000395881 SPATA31E1Q6ZUB1 1445 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms