RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 EID1Q9Y6B2 187 aa21.65■■□□□ 1.06
UBFD1-201ENST00000395878 CSPP1Q1MSJ5 1256 aa21.64■■□□□ 1.06
UBFD1-201ENST00000395878 SLC4A10Q6U841 1118 aa21.64■■□□□ 1.05
UBFD1-201ENST00000395878 NGDNQ8NEJ9 315 aaKnown RBP21.63■■□□□ 1.05
UBFD1-201ENST00000395878 UACAQ9BZF9 1416 aa21.63■■□□□ 1.05
UBFD1-201ENST00000395878 PANK3Q9H999 370 aa21.63■■□□□ 1.05
UBFD1-201ENST00000395878 TPM4P67936 248 aa21.62■■□□□ 1.05
UBFD1-201ENST00000395878 JPH4Q96JJ6 628 aa21.62■■□□□ 1.05
UBFD1-201ENST00000395878 CCDC34Q96HJ3 373 aa21.61■■□□□ 1.05
UBFD1-201ENST00000395878 AMPHP49418 695 aa21.61■■□□□ 1.05
UBFD1-201ENST00000395878 CENPQQ7L2Z9 268 aaPredicted RBP21.61■■□□□ 1.05
UBFD1-201ENST00000395878 TRAK1Q9UPV9 953 aa21.61■■□□□ 1.05
UBFD1-201ENST00000395878 PRKRIP1Q9H875 184 aaPredicted RBP21.6■■□□□ 1.05
UBFD1-201ENST00000395878 ST18O60284 1047 aa21.6■■□□□ 1.05
UBFD1-201ENST00000395878 CHMP3Q9Y3E7 222 aa21.6■■□□□ 1.05
UBFD1-201ENST00000395878 TAF7LQ5H9L4 462 aa21.59■■□□□ 1.05
UBFD1-201ENST00000395878 CLSTN1O94985 981 aa21.59■■□□□ 1.05
UBFD1-201ENST00000395878 NUTM2DQ5VT03 806 aaPredicted RBP21.59■■□□□ 1.05
UBFD1-201ENST00000395878 HSP90B1P14625 803 aaKnown RBP21.59■■□□□ 1.05
UBFD1-201ENST00000395878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.58■■□□□ 1.046e-7■■□□□ 11.7
UBFD1-201ENST00000395878 E9PSI1 815 aa21.57■■□□□ 1.04
UBFD1-201ENST00000395878 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
UBFD1-201ENST00000395878 CGNL1Q0VF96 1302 aa21.55■■□□□ 1.04
UBFD1-201ENST00000395878 RRP7AQ9Y3A4 280 aaKnown RBP21.54■■□□□ 1.04
UBFD1-201ENST00000395878 USP47Q96K76 1375 aa21.54■■□□□ 1.04
UBFD1-201ENST00000395878 FAM161AQ3B820 660 aa21.54■■□□□ 1.04
UBFD1-201ENST00000395878 RRP1P56182 461 aaKnown RBP21.53■■□□□ 1.04
UBFD1-201ENST00000395878 USP35Q9P2H5 1018 aa21.53■■□□□ 1.04
UBFD1-201ENST00000395878 PHF14O94880 888 aa21.53■■□□□ 1.04
UBFD1-201ENST00000395878 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
UBFD1-201ENST00000395878 ZKSCAN2Q63HK3 967 aa21.53■■□□□ 1.04
UBFD1-201ENST00000395878 KIF3AQ9Y496 699 aa21.53■■□□□ 1.04
UBFD1-201ENST00000395878 DDX11L8A8MPP1 907 aa21.52■■□□□ 1.04
UBFD1-201ENST00000395878 KIF16BQ96L93 1317 aa21.52■■□□□ 1.04
UBFD1-201ENST00000395878 EVC2Q86UK5 1308 aa21.51■■□□□ 1.03
UBFD1-201ENST00000395878 VGFO15240 615 aaPredicted RBP21.51■■□□□ 1.03
UBFD1-201ENST00000395878 PDE4AP27815 886 aa21.51■■□□□ 1.03
UBFD1-201ENST00000395878 FOXD4L1Q9NU39 408 aa21.51■■□□□ 1.03
UBFD1-201ENST00000395878 NOL8Q76FK4 1167 aaKnown RBP21.5■■□□□ 1.03
UBFD1-201ENST00000395878 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.5■■□□□ 1.03
UBFD1-201ENST00000395878 TMX4Q9H1E5 349 aaPredicted RBP21.49■■□□□ 1.03
UBFD1-201ENST00000395878 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
UBFD1-201ENST00000395878 NGEFQ8N5V2 710 aa21.48■■□□□ 1.03
UBFD1-201ENST00000395878 COG3Q96JB2 828 aa21.48■■□□□ 1.03
UBFD1-201ENST00000395878 EXOC6Q8TAG9 804 aa21.47■■□□□ 1.03
UBFD1-201ENST00000395878 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
UBFD1-201ENST00000395878 ANKRD45Q5TZF3 282 aa21.45■■□□□ 1.03
UBFD1-201ENST00000395878 CRBNQ96SW2 442 aa21.45■■□□□ 1.02
UBFD1-201ENST00000395878 PLIN1O60240 522 aa21.45■■□□□ 1.02
UBFD1-201ENST00000395878 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
UBFD1-201ENST00000395878 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
UBFD1-201ENST00000395878 PTPRGP23470 1445 aa21.44■■□□□ 1.02
UBFD1-201ENST00000395878 CHMP4CQ96CF2 233 aa21.44■■□□□ 1.02
UBFD1-201ENST00000395878 NUTM2FA1L443 756 aa21.43■■□□□ 1.02
UBFD1-201ENST00000395878 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
UBFD1-201ENST00000395878 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
UBFD1-201ENST00000395878 RASSF8Q8NHQ8 419 aa21.42■■□□□ 1.02
UBFD1-201ENST00000395878 SKOR2Q2VWA4 1001 aaPredicted RBP21.42■■□□□ 1.02
UBFD1-201ENST00000395878 ATP6V1DQ9Y5K8 247 aa21.41■■□□□ 1.02
UBFD1-201ENST00000395878 COG6Q9Y2V7 657 aa21.41■■□□□ 1.02
UBFD1-201ENST00000395878 APAF1O14727 1248 aa21.41■■□□□ 1.02
UBFD1-201ENST00000395878 SF3A1Q15459 793 aaKnown RBP21.41■■□□□ 1.02
UBFD1-201ENST00000395878 RILPL2Q969X0 211 aa21.41■■□□□ 1.02
UBFD1-201ENST00000395878 CCDC9Q9Y3X0 531 aaKnown RBP21.41■■□□□ 1.02
UBFD1-201ENST00000395878 DDX19BQ9UMR2 479 aa21.4■■□□□ 1.02
UBFD1-201ENST00000395878 NOC3LQ8WTT2 800 aaKnown RBP21.4■■□□□ 1.02
UBFD1-201ENST00000395878 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.01
UBFD1-201ENST00000395878 TOMM22Q9NS69 142 aa21.39■■□□□ 1.01
UBFD1-201ENST00000395878 C1orf141Q5JVX7 400 aa21.38■■□□□ 1.01
UBFD1-201ENST00000395878 DDX49Q9Y6V7 483 aaKnown RBP21.38■■□□□ 1.01
UBFD1-201ENST00000395878 FOXD4L5Q5VV16 416 aaPredicted RBP21.37■■□□□ 1.01
UBFD1-201ENST00000395878 FOXD4L4Q8WXT5 416 aaPredicted RBP21.37■■□□□ 1.01
UBFD1-201ENST00000395878 H3BQV1 296 aa21.36■■□□□ 1.01
UBFD1-201ENST00000395878 IFFO2Q5TF58 517 aa21.36■■□□□ 1.01
UBFD1-201ENST00000395878 DIAPH1O60610 1272 aaKnown RBP21.36■■□□□ 1.01
UBFD1-201ENST00000395878 TEFQ10587 303 aa21.35■■□□□ 1.01
UBFD1-201ENST00000395878 API5Q9BZZ5 524 aaKnown RBP21.35■■□□□ 1.01
UBFD1-201ENST00000395878 MINK1Q8N4C8 1332 aaPredicted RBP21.35■■□□□ 1.01
UBFD1-201ENST00000395878 ARID3AQ99856 593 aa21.35■■□□□ 1.01
UBFD1-201ENST00000395878 FRAT2O75474 233 aaPredicted RBP21.34■■□□□ 1.01
UBFD1-201ENST00000395878 REC8O95072 547 aa21.34■■□□□ 1.01
UBFD1-201ENST00000395878 STAC3Q96MF2 364 aa21.34■■□□□ 1.01
UBFD1-201ENST00000395878 FAM184AQ8NB25 1140 aa21.34■■□□□ 1.01
UBFD1-201ENST00000395878 GTF2E1P29083 439 aaPredicted RBP21.34■■□□□ 1.01
UBFD1-201ENST00000395878 DZIP1LQ8IYY4 767 aaKnown RBP21.33■■□□□ 1.01
UBFD1-201ENST00000395878 DIAPH3Q9NSV4 1193 aa21.33■■□□□ 1.01
UBFD1-201ENST00000395878 GSE1Q14687 1217 aa21.33■■□□□ 1
UBFD1-201ENST00000395878 RUFY2Q8WXA3 655 aa21.33■■□□□ 1
UBFD1-201ENST00000395878 FANCIQ9NVI1 1328 aa21.33■■□□□ 1
UBFD1-201ENST00000395878 SLC4A3P48751 1232 aa21.32■■□□□ 1
UBFD1-201ENST00000395878 TPM3P06753 285 aa21.32■■□□□ 1
UBFD1-201ENST00000395878 GOLGA6L1Q8N7Z2 621 aa21.32■■□□□ 1
UBFD1-201ENST00000395878 NEXNQ0ZGT2 675 aa21.32■■□□□ 1
UBFD1-201ENST00000395878 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
UBFD1-201ENST00000395878 FGD6Q6ZV73 1430 aa21.32■■□□□ 1
UBFD1-201ENST00000395878 CUX1P39880 1505 aa21.31■■□□□ 1
UBFD1-201ENST00000395878 ROCK1Q13464 1354 aa21.31■■□□□ 1
UBFD1-201ENST00000395878 G3V3G9 751 aa21.31■■□□□ 1
UBFD1-201ENST00000395878 DCAF8Q5TAQ9 597 aa21.31■■□□□ 1
UBFD1-201ENST00000395878 CCDC7Q96M83 1385 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms