RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 KIDINS220Q9ULH0 1771 aa14.34□□□□□ -0.11
BBS4-202ENST00000395205 COL17A1Q9UMD9 1497 aaPredicted RBP14.33□□□□□ -0.12
BBS4-202ENST00000395205 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.12
BBS4-202ENST00000395205 RICTORQ6R327 1708 aa14.32□□□□□ -0.12
BBS4-202ENST00000395205 KANK1Q14678 1352 aa14.32□□□□□ -0.12
BBS4-202ENST00000395205 GGT6Q6P531 493 aa14.31□□□□□ -0.12
BBS4-202ENST00000395205 FRMPD1Q5SYB0 1578 aa14.31□□□□□ -0.12
BBS4-202ENST00000395205 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
BBS4-202ENST00000395205 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
BBS4-202ENST00000395205 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
BBS4-202ENST00000395205 FAM135AQ9P2D6 1515 aa14.29□□□□□ -0.12
BBS4-202ENST00000395205 TIMELESSQ9UNS1 1208 aa14.29□□□□□ -0.12
BBS4-202ENST00000395205 UNC13BO14795 1591 aa14.28□□□□□ -0.12
BBS4-202ENST00000395205 ZMYM4Q5VZL5 1548 aa14.28□□□□□ -0.12
BBS4-202ENST00000395205 ABCA6Q8N139 1617 aa14.28□□□□□ -0.12
BBS4-202ENST00000395205 ATP10AO60312 1499 aa14.27□□□□□ -0.12
BBS4-202ENST00000395205 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
BBS4-202ENST00000395205 TONSLQ96HA7 1378 aa14.27□□□□□ -0.13
BBS4-202ENST00000395205 EIF2AK4Q9P2K8 1649 aaKnown RBP14.25□□□□□ -0.13
BBS4-202ENST00000395205 WASHC2CQ9Y4E1 1318 aa14.24□□□□□ -0.13
BBS4-202ENST00000395205 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
BBS4-202ENST00000395205 PPP1R15AO75807 674 aaPredicted RBP14.21□□□□□ -0.13
BBS4-202ENST00000395205 DEPDC5O75140 1603 aa14.21□□□□□ -0.14
BBS4-202ENST00000395205 MLECQ14165 292 aa14.2□□□□□ -0.14
BBS4-202ENST00000395205 ARID4BQ4LE39 1312 aaPredicted RBP14.2□□□□□ -0.14
BBS4-202ENST00000395205 PRDM15P57071 1507 aaPredicted RBP14.2□□□□□ -0.14
BBS4-202ENST00000395205 L3MBTL2Q969R5 705 aa14.19□□□□□ -0.14
BBS4-202ENST00000395205 RPRD2Q5VT52 1461 aaKnown RBP14.19□□□□□ -0.14
BBS4-202ENST00000395205 MROH1Q8NDA8 1641 aa14.18□□□□□ -0.14
BBS4-202ENST00000395205 VWDEQ8N2E2 1590 aa14.18□□□□□ -0.14
BBS4-202ENST00000395205 RNF17Q9BXT8 1623 aaKnown RBP14.18□□□□□ -0.14
BBS4-202ENST00000395205 CCDC144AA2RUR9 1427 aa14.17□□□□□ -0.14
BBS4-202ENST00000395205 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
BBS4-202ENST00000395205 ARHGEF40Q8TER5 1519 aa14.16□□□□□ -0.14
BBS4-202ENST00000395205 PLA2R1Q13018 1463 aa14.16□□□□□ -0.14
BBS4-202ENST00000395205 REREQ9P2R6 1566 aa14.15□□□□□ -0.14
BBS4-202ENST00000395205 AGLP35573 1532 aa14.15□□□□□ -0.14
BBS4-202ENST00000395205 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
BBS4-202ENST00000395205 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.14
BBS4-202ENST00000395205 BCORL1Q5H9F3 1711 aa14.15□□□□□ -0.14
BBS4-202ENST00000395205 TET3O43151 1660 aa14.14□□□□□ -0.15
BBS4-202ENST00000395205 RGL3Q3MIN7 710 aa14.14□□□□□ -0.15
BBS4-202ENST00000395205 ABCC3O15438 1527 aa14.13□□□□□ -0.15
BBS4-202ENST00000395205 PTPRTO14522 1441 aa14.12□□□□□ -0.15
BBS4-202ENST00000395205 E9PCH4 1651 aa14.11□□□□□ -0.15
BBS4-202ENST00000395205 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
BBS4-202ENST00000395205 EFCAB6Q5THR3 1501 aa14.11□□□□□ -0.15
BBS4-202ENST00000395205 NPATQ14207 1427 aa14.11□□□□□ -0.15
BBS4-202ENST00000395205 DCAF11Q8TEB1 546 aa14.1□□□□□ -0.15
BBS4-202ENST00000395205 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
BBS4-202ENST00000395205 CEP152O94986 1710 aa14.09□□□□□ -0.15
BBS4-202ENST00000395205 ZNF316A6NFI3 1004 aaPredicted RBP14.08□□□□□ -0.16
BBS4-202ENST00000395205 ARHGAP31Q2M1Z3 1444 aa14.08□□□□□ -0.16
BBS4-202ENST00000395205 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
BBS4-202ENST00000395205 TRPM2O94759 1503 aa14.07□□□□□ -0.16
BBS4-202ENST00000395205 FBXO31Q5XUX0 539 aaPredicted RBP14.07□□□□□ -0.16
BBS4-202ENST00000395205 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
BBS4-202ENST00000395205 NBPF8Q3BBV2 869 aa14.06□□□□□ -0.16
BBS4-202ENST00000395205 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
BBS4-202ENST00000395205 CAMSAP1Q5T5Y3 1602 aa14.05□□□□□ -0.16
BBS4-202ENST00000395205 ZC3H13Q5T200 1668 aaKnown RBP14.04□□□□□ -0.16
BBS4-202ENST00000395205 ZMYM3Q14202 1370 aa14.04□□□□□ -0.16
BBS4-202ENST00000395205 SPHKAPQ2M3C7 1700 aa14.03□□□□□ -0.16
BBS4-202ENST00000395205 NOS1P29475 1434 aa14.03□□□□□ -0.16
BBS4-202ENST00000395205 SLC52A1Q9NWF4 448 aa14.03□□□□□ -0.16
BBS4-202ENST00000395205 IDI1Q13907 227 aa14.02□□□□□ -0.16
BBS4-202ENST00000395205 SPATA31E1Q6ZUB1 1445 aa14.02□□□□□ -0.16
BBS4-202ENST00000395205 UGGT1Q9NYU2 1555 aa14.02□□□□□ -0.17
BBS4-202ENST00000395205 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
BBS4-202ENST00000395205 CLTCQ00610 1675 aaKnown RBP14□□□□□ -0.17
BBS4-202ENST00000395205 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
BBS4-202ENST00000395205 STAC3Q96MF2 364 aa13.99□□□□□ -0.17
BBS4-202ENST00000395205 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
BBS4-202ENST00000395205 UHRF1BP1Q6BDS2 1440 aa13.98□□□□□ -0.17
BBS4-202ENST00000395205 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
BBS4-202ENST00000395205 ERVK-7P63135 1459 aa13.98□□□□□ -0.17
BBS4-202ENST00000395205 CEBPAP49715 358 aaPredicted RBP13.98□□□□□ -0.17
BBS4-202ENST00000395205 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
BBS4-202ENST00000395205 CFAP65Q6ZU64 1925 aaKnown RBP13.96□□□□□ -0.17
BBS4-202ENST00000395205 SYNMO15061 1565 aa13.96□□□□□ -0.18
BBS4-202ENST00000395205 RPGRIP1LQ68CZ1 1315 aa13.95□□□□□ -0.18
BBS4-202ENST00000395205 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
BBS4-202ENST00000395205 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
BBS4-202ENST00000395205 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
BBS4-202ENST00000395205 PREX1Q8TCU6 1659 aa13.94□□□□□ -0.18
BBS4-202ENST00000395205 ROCK2O75116 1388 aaKnown RBP13.93□□□□□ -0.18
BBS4-202ENST00000395205 TNRQ92752 1358 aa13.93□□□□□ -0.18
BBS4-202ENST00000395205 NEURL4Q96JN8 1562 aa13.92□□□□□ -0.18
BBS4-202ENST00000395205 ADGRF5Q8IZF2 1346 aa13.92□□□□□ -0.18
BBS4-202ENST00000395205 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
BBS4-202ENST00000395205 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
BBS4-202ENST00000395205 SPATA31D1Q6ZQQ2 1576 aa13.92□□□□□ -0.18
BBS4-202ENST00000395205 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
BBS4-202ENST00000395205 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
BBS4-202ENST00000395205 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
BBS4-202ENST00000395205 KIF1BO60333 1816 aa13.9□□□□□ -0.18
BBS4-202ENST00000395205 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
BBS4-202ENST00000395205 PIK3C2BO00750 1634 aa13.9□□□□□ -0.18
BBS4-202ENST00000395205 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
BBS4-202ENST00000395205 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms