RNA–Protein interactions for RNA: ENST00000394990.8

SMIM29-202, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-202ENST00000394990 KIAA1107Q9UPP5 1409 aa22.4■■□□□ 1.18
SMIM29-202ENST00000394990 FBXO31Q5XUX0 539 aaPredicted RBP22.4■■□□□ 1.18
SMIM29-202ENST00000394990 LRRC7Q96NW7 1537 aa22.4■■□□□ 1.18
SMIM29-202ENST00000394990 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
SMIM29-202ENST00000394990 UBTFP17480 764 aaKnown RBP22.39■■□□□ 1.17
SMIM29-202ENST00000394990 STRCP1A6NGW2 1772 aa22.38■■□□□ 1.17
SMIM29-202ENST00000394990 EHMT2Q96KQ7 1210 aa22.37■■□□□ 1.17
SMIM29-202ENST00000394990 RNF17Q9BXT8 1623 aaKnown RBP22.37■■□□□ 1.17
SMIM29-202ENST00000394990 CASKIN1Q8WXD9 1431 aa22.37■■□□□ 1.17
SMIM29-202ENST00000394990 DEPDC5O75140 1603 aa22.36■■□□□ 1.17
SMIM29-202ENST00000394990 POTEAQ6S8J7 498 aa22.36■■□□□ 1.17
SMIM29-202ENST00000394990 PZPP20742 1482 aa22.34■■□□□ 1.17
SMIM29-202ENST00000394990 ADGBQ8N7X0 1667 aa22.34■■□□□ 1.17
SMIM29-202ENST00000394990 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
SMIM29-202ENST00000394990 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
SMIM29-202ENST00000394990 SYNMO15061 1565 aa22.32■■□□□ 1.16
SMIM29-202ENST00000394990 IQGAP1P46940 1657 aa22.31■■□□□ 1.16
SMIM29-202ENST00000394990 UGGT1Q9NYU2 1555 aa22.3■■□□□ 1.16
SMIM29-202ENST00000394990 NLRP1Q9C000 1473 aa22.29■■□□□ 1.16
SMIM29-202ENST00000394990 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
SMIM29-202ENST00000394990 MIA2Q96PC5 1412 aa22.29■■□□□ 1.16
SMIM29-202ENST00000394990 FAM135AQ9P2D6 1515 aa22.28■■□□□ 1.16
SMIM29-202ENST00000394990 DHX29Q7Z478 1369 aaKnown RBP22.27■■□□□ 1.16
SMIM29-202ENST00000394990 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
SMIM29-202ENST00000394990 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
SMIM29-202ENST00000394990 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
SMIM29-202ENST00000394990 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
SMIM29-202ENST00000394990 KIF3BO15066 747 aa22.21■■□□□ 1.15
SMIM29-202ENST00000394990 ZNF644Q9H582 1327 aaPredicted RBP22.21■■□□□ 1.15
SMIM29-202ENST00000394990 FYCO1Q9BQS8 1478 aa22.21■■□□□ 1.15
SMIM29-202ENST00000394990 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
SMIM29-202ENST00000394990 CCNB3Q8WWL7 1395 aa22.2■■□□□ 1.14
SMIM29-202ENST00000394990 ZC3H13Q5T200 1668 aaKnown RBP22.2■■□□□ 1.14
SMIM29-202ENST00000394990 FAM135BQ49AJ0 1406 aa22.19■■□□□ 1.14
SMIM29-202ENST00000394990 SRCAPQ6ZRS2 3230 aa22.18■■□□□ 1.14
SMIM29-202ENST00000394990 XIRP1Q702N8 1843 aaKnown RBP22.16■■□□□ 1.14
SMIM29-202ENST00000394990 TIAM1Q13009 1591 aa22.09■■□□□ 1.13
SMIM29-202ENST00000394990 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
SMIM29-202ENST00000394990 UPF1Q92900 1129 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMIM29-202ENST00000394990 LTKP29376 864 aa22.07■■□□□ 1.12
SMIM29-202ENST00000394990 ERVK-7P63135 1459 aa22.06■■□□□ 1.12
SMIM29-202ENST00000394990 NCOA2Q15596 1464 aa22.06■■□□□ 1.12
SMIM29-202ENST00000394990 ROBO1Q9Y6N7 1651 aa22.05■■□□□ 1.12
SMIM29-202ENST00000394990 UBR1Q8IWV7 1749 aa22.05■■□□□ 1.12
SMIM29-202ENST00000394990 ARHGAP23Q9P227 1491 aa22.04■■□□□ 1.12
SMIM29-202ENST00000394990 ABCC3O15438 1527 aa22.04■■□□□ 1.12
SMIM29-202ENST00000394990 CCDC141Q6ZP82 1450 aa22.03■■□□□ 1.12
SMIM29-202ENST00000394990 MTUS2Q5JR59 1369 aa22.03■■□□□ 1.12
SMIM29-202ENST00000394990 SLIT1O75093 1534 aa22.02■■□□□ 1.12
SMIM29-202ENST00000394990 TMEM94Q12767 1356 aa22.01■■□□□ 1.11
SMIM29-202ENST00000394990 TXNDC2Q86VQ3 553 aa22■■□□□ 1.11
SMIM29-202ENST00000394990 MAP3K1Q13233 1512 aa22■■□□□ 1.11
SMIM29-202ENST00000394990 JCADQ9P266 1359 aa21.96■■□□□ 1.11
SMIM29-202ENST00000394990 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
SMIM29-202ENST00000394990 CAMSAP2Q08AD1 1489 aa21.94■■□□□ 1.1
SMIM29-202ENST00000394990 LRRC9Q6ZRR7 1453 aa21.94■■□□□ 1.1
SMIM29-202ENST00000394990 RSPH4AQ5TD94 716 aa21.93■■□□□ 1.1
SMIM29-202ENST00000394990 RBM33Q96EV2 1170 aaKnown RBP21.93■■□□□ 1.1
SMIM29-202ENST00000394990 LRP6O75581 1613 aa21.92■■□□□ 1.1
SMIM29-202ENST00000394990 EHBP1L1Q8N3D4 1523 aa21.92■■□□□ 1.1
SMIM29-202ENST00000394990 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
SMIM29-202ENST00000394990 KCNA6P17658 529 aa21.91■■□□□ 1.1
SMIM29-202ENST00000394990 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
SMIM29-202ENST00000394990 PHLPP1O60346 1717 aa21.9■■□□□ 1.1
SMIM29-202ENST00000394990 EID1Q9Y6B2 187 aa21.9■■□□□ 1.1
SMIM29-202ENST00000394990 TMEM2Q9UHN6 1383 aa21.88■■□□□ 1.09
SMIM29-202ENST00000394990 PROSER2Q86WR7 435 aaPredicted RBP21.88■■□□□ 1.09
SMIM29-202ENST00000394990 PRDM15P57071 1507 aaPredicted RBP21.88■■□□□ 1.09
SMIM29-202ENST00000394990 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
SMIM29-202ENST00000394990 ZNF772Q68DY9 489 aaPredicted RBP21.87■■□□□ 1.09
SMIM29-202ENST00000394990 COL16A1Q07092 1604 aaPredicted RBP21.87■■□□□ 1.09
SMIM29-202ENST00000394990 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
SMIM29-202ENST00000394990 CEP152O94986 1710 aa21.86■■□□□ 1.09
SMIM29-202ENST00000394990 SLAIN2Q9P270 581 aa21.85■■□□□ 1.09
SMIM29-202ENST00000394990 TET3O43151 1660 aa21.85■■□□□ 1.09
SMIM29-202ENST00000394990 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
SMIM29-202ENST00000394990 TSPY4P0CV99 314 aa21.84■■□□□ 1.09
SMIM29-202ENST00000394990 TSPY10P0CW01 314 aa21.84■■□□□ 1.09
SMIM29-202ENST00000394990 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.09
SMIM29-202ENST00000394990 SPATA31A6Q5VVP1 1343 aa21.83■■□□□ 1.09
SMIM29-202ENST00000394990 PIK3C2BO00750 1634 aa21.83■■□□□ 1.08
SMIM29-202ENST00000394990 MSH6P52701 1360 aa21.83■■□□□ 1.08
SMIM29-202ENST00000394990 NWD1Q149M9 1564 aa21.82■■□□□ 1.08
SMIM29-202ENST00000394990 ARHGAP31Q2M1Z3 1444 aa21.82■■□□□ 1.08
SMIM29-202ENST00000394990 SLC26A8Q96RN1 970 aa21.82■■□□□ 1.08
SMIM29-202ENST00000394990 FGD6Q6ZV73 1430 aa21.81■■□□□ 1.08
SMIM29-202ENST00000394990 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
SMIM29-202ENST00000394990 MAST1Q9Y2H9 1570 aa21.79■■□□□ 1.08
SMIM29-202ENST00000394990 RXRBP28702 533 aa21.79■■□□□ 1.08
SMIM29-202ENST00000394990 MEX3CQ5U5Q3 659 aaKnown RBP21.79■■□□□ 1.08
SMIM29-202ENST00000394990 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
SMIM29-202ENST00000394990 KDM5AP29375 1690 aaKnown RBP21.73■■□□□ 1.07
SMIM29-202ENST00000394990 SHPRHQ149N8 1683 aa21.72■■□□□ 1.07
SMIM29-202ENST00000394990 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
SMIM29-202ENST00000394990 AHDC1Q5TGY3 1603 aaPredicted RBP21.71■■□□□ 1.07
SMIM29-202ENST00000394990 IDI1Q13907 227 aa21.71■■□□□ 1.07
SMIM29-202ENST00000394990 DUOX2Q9NRD8 1548 aa21.69■■□□□ 1.06
SMIM29-202ENST00000394990 RGS12O14924 1447 aa21.67■■□□□ 1.06
SMIM29-202ENST00000394990 DIP2AQ14689 1571 aa21.65■■□□□ 1.06
SMIM29-202ENST00000394990 AFF2P51816 1311 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms