RNA–Protein interactions for RNA: ENST00000394839.6

PRKACB-208, Transcript of protein kinase cAMP-activated catalytic subunit beta, humanhuman

TSL 2 BASIC

Gene PRKACB, Length 4,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACB-208ENST00000394839 NLRP1Q9C000 1473 aa6.71□□□□□ -1.34
PRKACB-208ENST00000394839 STAG3Q9UJ98 1225 aa6.71□□□□□ -1.34
PRKACB-208ENST00000394839 KANK1Q14678 1352 aa6.7□□□□□ -1.34
PRKACB-208ENST00000394839 CEP162Q5TB80 1403 aa6.7□□□□□ -1.34
PRKACB-208ENST00000394839 CEP170BQ9Y4F5 1589 aaPredicted RBP6.7□□□□□ -1.34
PRKACB-208ENST00000394839 ADGBQ8N7X0 1667 aa6.7□□□□□ -1.34
PRKACB-208ENST00000394839 CDC42BPBQ9Y5S2 1711 aa6.69□□□□□ -1.34
PRKACB-208ENST00000394839 HDGFP51858 240 aaKnown RBP6.69□□□□□ -1.34
PRKACB-208ENST00000394839 KDM5DQ9BY66 1539 aa6.69□□□□□ -1.34
PRKACB-208ENST00000394839 KIDINS220Q9ULH0 1771 aa6.68□□□□□ -1.34
PRKACB-208ENST00000394839 INO80Q9ULG1 1556 aaPredicted RBP6.68□□□□□ -1.34
PRKACB-208ENST00000394839 ZNF335Q9H4Z2 1342 aaPredicted RBP6.68□□□□□ -1.34
PRKACB-208ENST00000394839 PIP4K2BP78356 416 aa6.68□□□□□ -1.34
PRKACB-208ENST00000394839 PZPP20742 1482 aa6.68□□□□□ -1.34
PRKACB-208ENST00000394839 MSH5O43196 834 aa6.68□□□□□ -1.34
PRKACB-208ENST00000394839 NPM3O75607 178 aaKnown RBP6.68□□□□□ -1.34
PRKACB-208ENST00000394839 ZNF142P52746 1687 aaPredicted RBP6.67□□□□□ -1.34
PRKACB-208ENST00000394839 TCOF1Q13428 1488 aaKnown RBP6.67□□□□□ -1.34
PRKACB-208ENST00000394839 CDC42BPAQ5VT25 1732 aa6.67□□□□□ -1.34
PRKACB-208ENST00000394839 LTBP4Q8N2S1 1624 aa6.67□□□□□ -1.34
PRKACB-208ENST00000394839 MYO3AQ8NEV4 1616 aa6.67□□□□□ -1.34
PRKACB-208ENST00000394839 SUPT6HQ7KZ85 1726 aaKnown RBP6.67□□□□□ -1.34
PRKACB-208ENST00000394839 NPHP4O75161 1426 aaPredicted RBP6.67□□□□□ -1.34
PRKACB-208ENST00000394839 PLXNC1O60486 1568 aa6.66□□□□□ -1.34
PRKACB-208ENST00000394839 CLTCQ00610 1675 aaKnown RBP6.66□□□□□ -1.34
PRKACB-208ENST00000394839 MIA2Q96PC5 1412 aa6.66□□□□□ -1.34
PRKACB-208ENST00000394839 CNKSR2Q8WXI2 1034 aa6.66□□□□□ -1.34
PRKACB-208ENST00000394839 SHANK2Q9UPX8 1470 aa6.66□□□□□ -1.34
PRKACB-208ENST00000394839 STRCQ7RTU9 1775 aa6.66□□□□□ -1.34
PRKACB-208ENST00000394839 SIGLEC1Q9BZZ2 1709 aa6.64□□□□□ -1.35
PRKACB-208ENST00000394839 BCANQ96GW7 911 aa6.64□□□□□ -1.35
PRKACB-208ENST00000394839 CAMSAP2Q08AD1 1489 aa6.64□□□□□ -1.35
PRKACB-208ENST00000394839 MYOM3Q5VTT5 1437 aa6.64□□□□□ -1.35
PRKACB-208ENST00000394839 NCOA2Q15596 1464 aa6.64□□□□□ -1.35
PRKACB-208ENST00000394839 UGGT1Q9NYU2 1555 aa6.64□□□□□ -1.35
PRKACB-208ENST00000394839 ARHGEF5Q12774 1597 aa6.64□□□□□ -1.35
PRKACB-208ENST00000394839 TIAM1Q13009 1591 aa6.63□□□□□ -1.35
PRKACB-208ENST00000394839 ILDR2Q71H61 639 aa6.62□□□□□ -1.35
PRKACB-208ENST00000394839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRKACB-208ENST00000394839 PPP1R15AO75807 674 aaPredicted RBP6.62□□□□□ -1.35
PRKACB-208ENST00000394839 HSPA1LP34931 641 aa6.62□□□□□ -1.35
PRKACB-208ENST00000394839 ZC3H13Q5T200 1668 aaKnown RBP6.62□□□□□ -1.35
PRKACB-208ENST00000394839 MBD5Q9P267 1494 aa6.62□□□□□ -1.35
PRKACB-208ENST00000394839 TXNDC2Q86VQ3 553 aa6.61□□□□□ -1.35
PRKACB-208ENST00000394839 LRRC9Q6ZRR7 1453 aa6.61□□□□□ -1.35
PRKACB-208ENST00000394839 VPS8Q8N3P4 1428 aa6.61□□□□□ -1.35
PRKACB-208ENST00000394839 ANKRD30AQ9BXX3 1397 aa6.61□□□□□ -1.35
PRKACB-208ENST00000394839 DNMT1P26358 1616 aaKnown RBP6.61□□□□□ -1.35
PRKACB-208ENST00000394839 SYNMO15061 1565 aa6.61□□□□□ -1.35
PRKACB-208ENST00000394839 DUOX2Q9NRD8 1548 aa6.61□□□□□ -1.35
PRKACB-208ENST00000394839 MED14O60244 1454 aa6.61□□□□□ -1.35
PRKACB-208ENST00000394839 ZNF644Q9H582 1327 aaPredicted RBP6.6□□□□□ -1.35
PRKACB-208ENST00000394839 FBXO31Q5XUX0 539 aaPredicted RBP6.6□□□□□ -1.35
PRKACB-208ENST00000394839 SCAF11Q99590 1463 aaKnown RBP6.6□□□□□ -1.35
PRKACB-208ENST00000394839 DEPDC5O75140 1603 aa6.6□□□□□ -1.35
PRKACB-208ENST00000394839 EIF2AK4Q9P2K8 1649 aaKnown RBP6.6□□□□□ -1.35
PRKACB-208ENST00000394839 MAP3K1Q13233 1512 aa6.6□□□□□ -1.35
PRKACB-208ENST00000394839 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRKACB-208ENST00000394839 ERBINQ96RT1 1412 aa6.6□□□□□ -1.35
PRKACB-208ENST00000394839 POLR1AO95602 1720 aaPredicted RBP6.6□□□□□ -1.35
PRKACB-208ENST00000394839 MAST1Q9Y2H9 1570 aa6.59□□□□□ -1.35
PRKACB-208ENST00000394839 ERVK-7P63135 1459 aa6.59□□□□□ -1.35
PRKACB-208ENST00000394839 C14orf37Q86TY3 774 aa6.59□□□□□ -1.35
PRKACB-208ENST00000394839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRKACB-208ENST00000394839 SLC52A1Q9NWF4 448 aa6.59□□□□□ -1.35
PRKACB-208ENST00000394839 KIF15Q9NS87 1388 aa6.59□□□□□ -1.35
PRKACB-208ENST00000394839 LRRIQ1Q96JM4 1722 aa6.59□□□□□ -1.36
PRKACB-208ENST00000394839 MSH6P52701 1360 aa6.58□□□□□ -1.36
PRKACB-208ENST00000394839 ARHGAP31Q2M1Z3 1444 aa6.58□□□□□ -1.36
PRKACB-208ENST00000394839 RNF17Q9BXT8 1623 aaKnown RBP6.58□□□□□ -1.36
PRKACB-208ENST00000394839 PROSER2Q86WR7 435 aaPredicted RBP6.58□□□□□ -1.36
PRKACB-208ENST00000394839 MED1Q15648 1581 aaPredicted RBP6.58□□□□□ -1.36
PRKACB-208ENST00000394839 ABCC3O15438 1527 aa6.58□□□□□ -1.36
PRKACB-208ENST00000394839 MEX3CQ5U5Q3 659 aaKnown RBP6.57□□□□□ -1.36
PRKACB-208ENST00000394839 KCNA6P17658 529 aa6.57□□□□□ -1.36
PRKACB-208ENST00000394839 IQGAP1P46940 1657 aa6.57□□□□□ -1.36
PRKACB-208ENST00000394839 TMEM2Q9UHN6 1383 aa6.55□□□□□ -1.36
PRKACB-208ENST00000394839 FAM135BQ49AJ0 1406 aa6.55□□□□□ -1.36
PRKACB-208ENST00000394839 ATF3P18847 181 aa6.54□□□□□ -1.36
PRKACB-208ENST00000394839 RRP7BPQ9NSQ0 103 aa6.54□□□□□ -1.36
PRKACB-208ENST00000394839 NKTRP30414 1462 aaKnown RBP6.54□□□□□ -1.36
PRKACB-208ENST00000394839 LRRC7Q96NW7 1537 aa6.54□□□□□ -1.36
PRKACB-208ENST00000394839 VWDEQ8N2E2 1590 aa6.54□□□□□ -1.36
PRKACB-208ENST00000394839 NEURL4Q96JN8 1562 aa6.54□□□□□ -1.36
PRKACB-208ENST00000394839 EFCAB6Q5THR3 1501 aa6.54□□□□□ -1.36
PRKACB-208ENST00000394839 SLIT1O75093 1534 aa6.53□□□□□ -1.36
PRKACB-208ENST00000394839 CHGAP10645 457 aaKnown RBP6.53□□□□□ -1.36
PRKACB-208ENST00000394839 ZNF772Q68DY9 489 aaPredicted RBP6.53□□□□□ -1.36
PRKACB-208ENST00000394839 JCADQ9P266 1359 aa6.53□□□□□ -1.36
PRKACB-208ENST00000394839 CADPS2Q86UW7 1296 aa6.53□□□□□ -1.36
PRKACB-208ENST00000394839 ARHGAP23Q9P227 1491 aa6.53□□□□□ -1.36
PRKACB-208ENST00000394839 NCOA3Q9Y6Q9 1424 aa6.53□□□□□ -1.36
PRKACB-208ENST00000394839 FAM50AQ14320 339 aaKnown RBP6.53□□□□□ -1.36
PRKACB-208ENST00000394839 RPRD2Q5VT52 1461 aaKnown RBP6.52□□□□□ -1.37
PRKACB-208ENST00000394839 TMEM94Q12767 1356 aa6.52□□□□□ -1.37
PRKACB-208ENST00000394839 PRDM15P57071 1507 aaPredicted RBP6.52□□□□□ -1.37
PRKACB-208ENST00000394839 SPATA31A6Q5VVP1 1343 aa6.52□□□□□ -1.37
PRKACB-208ENST00000394839 DAPK1P53355 1430 aa6.51□□□□□ -1.37
PRKACB-208ENST00000394839 PIK3R4Q99570 1358 aa6.51□□□□□ -1.37
PRKACB-208ENST00000394839 LMTK2Q8IWU2 1503 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms