RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ERBINQ96RT1 1412 aa25.95■■□□□ 1.74
SIL1-202ENST00000394817 C11orf95C9JLR9 678 aaPredicted RBP25.95■■□□□ 1.74
SIL1-202ENST00000394817 ZFYVE16Q7Z3T8 1539 aa25.95■■□□□ 1.74
SIL1-202ENST00000394817 CD109Q6YHK3 1445 aa25.93■■□□□ 1.74
SIL1-202ENST00000394817 SCAPERQ9BY12 1400 aa25.92■■□□□ 1.74
SIL1-202ENST00000394817 BCORL1Q5H9F3 1711 aa25.92■■□□□ 1.74
SIL1-202ENST00000394817 SPAG9O60271 1321 aaKnown RBP25.91■■□□□ 1.74
SIL1-202ENST00000394817 USP47Q96K76 1375 aa25.91■■□□□ 1.74
SIL1-202ENST00000394817 INO80Q9ULG1 1556 aaPredicted RBP25.9■■□□□ 1.74
SIL1-202ENST00000394817 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
SIL1-202ENST00000394817 RTEL1-TNFRSF6BF6WH68 1400 aa25.88■■□□□ 1.73
SIL1-202ENST00000394817 CFAP74Q9C0B2 1584 aa25.88■■□□□ 1.73
SIL1-202ENST00000394817 ATP7AQ04656 1500 aa25.87■■□□□ 1.73
SIL1-202ENST00000394817 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
SIL1-202ENST00000394817 CCDC144AA2RUR9 1427 aa25.85■■□□□ 1.73
SIL1-202ENST00000394817 PLA2R1Q13018 1463 aa25.84■■□□□ 1.73
SIL1-202ENST00000394817 ZNF326Q5BKZ1 582 aaKnown RBP25.84■■□□□ 1.73
SIL1-202ENST00000394817 ATP10AO60312 1499 aa25.83■■□□□ 1.72
SIL1-202ENST00000394817 SUPT16HQ9Y5B9 1047 aaKnown RBP25.82■■□□□ 1.72
SIL1-202ENST00000394817 TRPM1Q7Z4N2 1603 aa25.82■■□□□ 1.72
SIL1-202ENST00000394817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.81■■□□□ 1.72
SIL1-202ENST00000394817 MAP3K4Q9Y6R4 1608 aa25.81■■□□□ 1.72
SIL1-202ENST00000394817 ARID4BQ4LE39 1312 aaPredicted RBP25.8■■□□□ 1.72
SIL1-202ENST00000394817 KIDINS220Q9ULH0 1771 aa25.79■■□□□ 1.72
SIL1-202ENST00000394817 DEPDC5O75140 1603 aa25.78■■□□□ 1.72
SIL1-202ENST00000394817 ZNF518AQ6AHZ1 1483 aa25.78■■□□□ 1.72
SIL1-202ENST00000394817 PRKRIP1Q9H875 184 aaPredicted RBP25.77■■□□□ 1.72
SIL1-202ENST00000394817 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
SIL1-202ENST00000394817 PRAG1Q86YV5 1406 aa25.76■■□□□ 1.71
SIL1-202ENST00000394817 GLI2P10070 1586 aa25.75■■□□□ 1.71
SIL1-202ENST00000394817 DCAF11Q8TEB1 546 aa25.75■■□□□ 1.71
SIL1-202ENST00000394817 MYT1LQ9UL68 1186 aa25.75■■□□□ 1.71
SIL1-202ENST00000394817 LAMC1P11047 1609 aa25.75■■□□□ 1.71
SIL1-202ENST00000394817 A2MP01023 1474 aa25.74■■□□□ 1.71
SIL1-202ENST00000394817 CARD11Q9BXL7 1154 aa25.73■■□□□ 1.71
SIL1-202ENST00000394817 NEO1Q92859 1461 aa25.73■■□□□ 1.71
SIL1-202ENST00000394817 E9PCH4 1651 aa25.73■■□□□ 1.71
SIL1-202ENST00000394817 DIP2BQ9P265 1576 aa25.73■■□□□ 1.71
SIL1-202ENST00000394817 EIF2AK4Q9P2K8 1649 aaKnown RBP25.71■■□□□ 1.71
SIL1-202ENST00000394817 KDM2AQ9Y2K7 1162 aa25.71■■□□□ 1.71
SIL1-202ENST00000394817 DHX29Q7Z478 1369 aaKnown RBP25.7■■□□□ 1.7
SIL1-202ENST00000394817 ROCK2O75116 1388 aaKnown RBP25.69■■□□□ 1.7
SIL1-202ENST00000394817 HECW2Q9P2P5 1572 aa25.68■■□□□ 1.7
SIL1-202ENST00000394817 SPHKAPQ2M3C7 1700 aa25.67■■□□□ 1.7
SIL1-202ENST00000394817 TET3O43151 1660 aa25.67■■□□□ 1.7
SIL1-202ENST00000394817 GPRASP1Q5JY77 1395 aa25.66■■□□□ 1.7
SIL1-202ENST00000394817 FAM69CQ0P6D2 419 aa25.65■■□□□ 1.7
SIL1-202ENST00000394817 CEP152O94986 1710 aa25.65■■□□□ 1.7
SIL1-202ENST00000394817 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
SIL1-202ENST00000394817 TRPM2O94759 1503 aa25.64■■□□□ 1.7
SIL1-202ENST00000394817 MLH3Q9UHC1 1453 aa25.64■■□□□ 1.69
SIL1-202ENST00000394817 TSPOAP1O95153 1857 aa25.64■■□□□ 1.69
SIL1-202ENST00000394817 PRDM15P57071 1507 aaPredicted RBP25.63■■□□□ 1.69
SIL1-202ENST00000394817 RICTORQ6R327 1708 aa25.63■■□□□ 1.69
SIL1-202ENST00000394817 MROH1Q8NDA8 1641 aa25.63■■□□□ 1.69
SIL1-202ENST00000394817 RNF17Q9BXT8 1623 aaKnown RBP25.63■■□□□ 1.69
SIL1-202ENST00000394817 RAPGEF3O95398 923 aa25.63■■□□□ 1.69
SIL1-202ENST00000394817 HNRNPUQ00839 825 aaKnown RBP eCLIP25.63■■□□□ 1.69
SIL1-202ENST00000394817 CCDC184Q52MB2 194 aa25.63■■□□□ 1.69
SIL1-202ENST00000394817 ABCA6Q8N139 1617 aa25.63■■□□□ 1.69
SIL1-202ENST00000394817 KIF3BO15066 747 aa25.61■■□□□ 1.69
SIL1-202ENST00000394817 PPRC1Q5VV67 1664 aaKnown RBP25.61■■□□□ 1.69
SIL1-202ENST00000394817 FRMPD1Q5SYB0 1578 aa25.6■■□□□ 1.69
SIL1-202ENST00000394817 ST20-MTHFSA0A0A6YYL1 179 aa25.6■■□□□ 1.69
SIL1-202ENST00000394817 RGL3Q3MIN7 710 aa25.59■■□□□ 1.69
SIL1-202ENST00000394817 MRS2Q9HD23 443 aa25.58■■□□□ 1.69
SIL1-202ENST00000394817 PTPRTO14522 1441 aa25.57■■□□□ 1.68
SIL1-202ENST00000394817 CLTCL1P53675 1640 aa25.56■■□□□ 1.68
SIL1-202ENST00000394817 MADDQ8WXG6 1647 aa25.55■■□□□ 1.68
SIL1-202ENST00000394817 KIF13AQ9H1H9 1805 aa25.54■■□□□ 1.68
SIL1-202ENST00000394817 POLR3GLQ9BT43 218 aa25.54■■□□□ 1.68
SIL1-202ENST00000394817 KANK1Q14678 1352 aa25.53■■□□□ 1.68
SIL1-202ENST00000394817 DIP2CQ9Y2E4 1556 aa25.53■■□□□ 1.68
SIL1-202ENST00000394817 NEURL4Q96JN8 1562 aa25.51■■□□□ 1.67
SIL1-202ENST00000394817 FKBP8Q14318 412 aa25.51■■□□□ 1.67
SIL1-202ENST00000394817 COL17A1Q9UMD9 1497 aaPredicted RBP25.5■■□□□ 1.67
SIL1-202ENST00000394817 NEFLP07196 543 aa25.5■■□□□ 1.67
SIL1-202ENST00000394817 NBPF1Q3BBV0 1214 aa25.5■■□□□ 1.67
SIL1-202ENST00000394817 IQGAP1P46940 1657 aa25.48■■□□□ 1.67
SIL1-202ENST00000394817 FAM9BQ8IZU0 186 aa25.47■■□□□ 1.67
SIL1-202ENST00000394817 YEATS2Q9ULM3 1422 aa25.46■■□□□ 1.67
SIL1-202ENST00000394817 EFCAB6Q5THR3 1501 aa25.46■■□□□ 1.67
SIL1-202ENST00000394817 KTN1Q86UP2 1357 aaKnown RBP25.46■■□□□ 1.67
SIL1-202ENST00000394817 ZBED9Q6R2W3 1325 aa25.45■■□□□ 1.66
SIL1-202ENST00000394817 LMTK2Q8IWU2 1503 aa25.43■■□□□ 1.66
SIL1-202ENST00000394817 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
SIL1-202ENST00000394817 KIAA1210Q9ULL0 1709 aa25.42■■□□□ 1.66
SIL1-202ENST00000394817 STAC3Q96MF2 364 aa25.41■■□□□ 1.66
SIL1-202ENST00000394817 KIF1BO60333 1816 aa25.41■■□□□ 1.66
SIL1-202ENST00000394817 TESK2Q96S53 571 aa25.4■■□□□ 1.66
SIL1-202ENST00000394817 GGT6Q6P531 493 aa25.39■■□□□ 1.66
SIL1-202ENST00000394817 IFT172Q9UG01 1749 aa25.38■■□□□ 1.65
SIL1-202ENST00000394817 DISP3Q9P2K9 1392 aa25.37■■□□□ 1.65
SIL1-202ENST00000394817 UGGT1Q9NYU2 1555 aa25.36■■□□□ 1.65
SIL1-202ENST00000394817 ABCC3O15438 1527 aa25.35■■□□□ 1.65
SIL1-202ENST00000394817 BCANQ96GW7 911 aa25.35■■□□□ 1.65
SIL1-202ENST00000394817 RALBP1Q15311 655 aa25.34■■□□□ 1.65
SIL1-202ENST00000394817 BRD4O60885 1362 aaPredicted RBP25.33■■□□□ 1.65
SIL1-202ENST00000394817 MYBBP1AQ9BQG0 1328 aaKnown RBP25.33■■□□□ 1.65
SIL1-202ENST00000394817 CFAP65Q6ZU64 1925 aaKnown RBP25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms