RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 ANKRD30AQ9BXX3 1397 aa21.59■■□□□ 1.05
EFEMP1-202ENST00000394555 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
EFEMP1-202ENST00000394555 ANKRD50Q9ULJ7 1429 aa21.59■■□□□ 1.05
EFEMP1-202ENST00000394555 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.05
EFEMP1-202ENST00000394555 UHRF1BP1Q6BDS2 1440 aa21.58■■□□□ 1.04
EFEMP1-202ENST00000394555 RGL3Q3MIN7 710 aa21.56■■□□□ 1.04
EFEMP1-202ENST00000394555 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
EFEMP1-202ENST00000394555 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
EFEMP1-202ENST00000394555 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
EFEMP1-202ENST00000394555 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
EFEMP1-202ENST00000394555 KIAA0586Q9BVV6 1533 aa21.52■■□□□ 1.04
EFEMP1-202ENST00000394555 PER1O15534 1290 aaPredicted RBP21.52■■□□□ 1.04
EFEMP1-202ENST00000394555 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
EFEMP1-202ENST00000394555 GPATCH8Q9UKJ3 1502 aaKnown RBP21.5■■□□□ 1.03
EFEMP1-202ENST00000394555 RGS3P49796 1198 aa21.5■■□□□ 1.03
EFEMP1-202ENST00000394555 EIF5BO60841 1220 aaKnown RBP21.5■■□□□ 1.03
EFEMP1-202ENST00000394555 TROQ12816 1431 aaPredicted RBP21.5■■□□□ 1.03
EFEMP1-202ENST00000394555 PANK3Q9H999 370 aa21.49■■□□□ 1.03
EFEMP1-202ENST00000394555 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
EFEMP1-202ENST00000394555 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
EFEMP1-202ENST00000394555 ADGBQ8N7X0 1667 aa21.47■■□□□ 1.03
EFEMP1-202ENST00000394555 TSPY4P0CV99 314 aa21.47■■□□□ 1.03
EFEMP1-202ENST00000394555 TSPY10P0CW01 314 aa21.47■■□□□ 1.03
EFEMP1-202ENST00000394555 DISP1Q96F81 1524 aa21.46■■□□□ 1.03
EFEMP1-202ENST00000394555 FRAT2O75474 233 aaPredicted RBP21.46■■□□□ 1.03
EFEMP1-202ENST00000394555 ADAMTS8Q9UP79 889 aa21.46■■□□□ 1.03
EFEMP1-202ENST00000394555 RAPGEF6Q8TEU7 1601 aa21.46■■□□□ 1.03
EFEMP1-202ENST00000394555 FAM161AQ3B820 660 aa21.45■■□□□ 1.02
EFEMP1-202ENST00000394555 ADGRL2O95490 1459 aa21.45■■□□□ 1.02
EFEMP1-202ENST00000394555 ARHGEF12Q9NZN5 1544 aa21.45■■□□□ 1.02
EFEMP1-202ENST00000394555 CENPQQ7L2Z9 268 aaPredicted RBP21.45■■□□□ 1.02
EFEMP1-202ENST00000394555 KDM2BQ8NHM5 1336 aa21.44■■□□□ 1.02
EFEMP1-202ENST00000394555 KIAA0556O60303 1618 aa21.43■■□□□ 1.02
EFEMP1-202ENST00000394555 C8orf34Q49A92 452 aa21.43■■□□□ 1.02
EFEMP1-202ENST00000394555 E9PCH4 1651 aa21.43■■□□□ 1.02
EFEMP1-202ENST00000394555 HNRNPMP52272 730 aaKnown RBP eCLIP21.42■■□□□ 1.02
EFEMP1-202ENST00000394555 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
EFEMP1-202ENST00000394555 DISP3Q9P2K9 1392 aa21.41■■□□□ 1.02
EFEMP1-202ENST00000394555 C9orf84Q5VXU9 1444 aa21.4■■□□□ 1.02
EFEMP1-202ENST00000394555 BLMP54132 1417 aaPredicted RBP21.39■■□□□ 1.02
EFEMP1-202ENST00000394555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.01
EFEMP1-202ENST00000394555 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
EFEMP1-202ENST00000394555 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
EFEMP1-202ENST00000394555 DUSP27Q5VZP5 1158 aa21.37■■□□□ 1.01
EFEMP1-202ENST00000394555 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
EFEMP1-202ENST00000394555 TESK2Q96S53 571 aa21.36■■□□□ 1.01
EFEMP1-202ENST00000394555 CROCC2H7BZ55 1655 aa21.35■■□□□ 1.01
EFEMP1-202ENST00000394555 PRAG1Q86YV5 1406 aa21.35■■□□□ 1.01
EFEMP1-202ENST00000394555 PLEKHH1Q9ULM0 1364 aa21.34■■□□□ 1.01
EFEMP1-202ENST00000394555 FBLN2P98095 1184 aa21.34■■□□□ 1.01
EFEMP1-202ENST00000394555 TMF1P82094 1093 aa21.34■■□□□ 1.01
EFEMP1-202ENST00000394555 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.34■■□□□ 1.01
EFEMP1-202ENST00000394555 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
EFEMP1-202ENST00000394555 GOLGA2Q08379 1002 aa21.33■■□□□ 1.01
EFEMP1-202ENST00000394555 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1.01
EFEMP1-202ENST00000394555 ZMYM4Q5VZL5 1548 aa21.33■■□□□ 1
EFEMP1-202ENST00000394555 CEP170Q5SW79 1584 aa21.32■■□□□ 1
EFEMP1-202ENST00000394555 CCDC146Q8IYE0 955 aa21.31■■□□□ 1
EFEMP1-202ENST00000394555 KNSTRNQ9Y448 316 aa21.29■■□□□ 1
EFEMP1-202ENST00000394555 ERBINQ96RT1 1412 aa21.29■■□□□ 1
EFEMP1-202ENST00000394555 COL17A1Q9UMD9 1497 aaPredicted RBP21.29■■□□□ 1
EFEMP1-202ENST00000394555 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
EFEMP1-202ENST00000394555 PPP2R1AP30153 589 aa21.28■■□□□ 1
EFEMP1-202ENST00000394555 PLEKHH2Q8IVE3 1493 aa21.28■■□□□ 1
EFEMP1-202ENST00000394555 BCAR3O75815 825 aa21.26■□□□□ 0.99
EFEMP1-202ENST00000394555 TRPM1Q7Z4N2 1603 aa21.26■□□□□ 0.99
EFEMP1-202ENST00000394555 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
EFEMP1-202ENST00000394555 SLKQ9H2G2 1235 aaPredicted RBP21.25■□□□□ 0.99
EFEMP1-202ENST00000394555 INSRP06213 1382 aa21.25■□□□□ 0.99
EFEMP1-202ENST00000394555 POGKQ9P215 609 aa21.24■□□□□ 0.99
EFEMP1-202ENST00000394555 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
EFEMP1-202ENST00000394555 PTPRGP23470 1445 aa21.23■□□□□ 0.99
EFEMP1-202ENST00000394555 FAM135AQ9P2D6 1515 aa21.23■□□□□ 0.99
EFEMP1-202ENST00000394555 SLFN5Q08AF3 891 aa21.23■□□□□ 0.99
EFEMP1-202ENST00000394555 ARXQ96QS3 562 aa21.23■□□□□ 0.99
EFEMP1-202ENST00000394555 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
EFEMP1-202ENST00000394555 IGHDP01880 384 aa21.22■□□□□ 0.99
EFEMP1-202ENST00000394555 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
EFEMP1-202ENST00000394555 A2MP01023 1474 aa21.21■□□□□ 0.99
EFEMP1-202ENST00000394555 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
EFEMP1-202ENST00000394555 APAF1O14727 1248 aa21.21■□□□□ 0.99
EFEMP1-202ENST00000394555 SEC24BO95487 1268 aa21.21■□□□□ 0.99
EFEMP1-202ENST00000394555 GPRASP1Q5JY77 1395 aa21.21■□□□□ 0.99
EFEMP1-202ENST00000394555 ZNF521Q96K83 1311 aa21.2■□□□□ 0.98
EFEMP1-202ENST00000394555 FAM43AQ8N2R8 423 aa21.19■□□□□ 0.98
EFEMP1-202ENST00000394555 ADCY10Q96PN6 1610 aa21.19■□□□□ 0.98
EFEMP1-202ENST00000394555 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
EFEMP1-202ENST00000394555 UBE2Q2Q8WVN8 375 aa21.18■□□□□ 0.98
EFEMP1-202ENST00000394555 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
EFEMP1-202ENST00000394555 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
EFEMP1-202ENST00000394555 USP19O94966 1318 aa21.16■□□□□ 0.98
EFEMP1-202ENST00000394555 AMER1Q5JTC6 1135 aaPredicted RBP21.16■□□□□ 0.98
EFEMP1-202ENST00000394555 PLA2R1Q13018 1463 aa21.16■□□□□ 0.98
EFEMP1-202ENST00000394555 MAGI2Q86UL8 1455 aa21.16■□□□□ 0.98
EFEMP1-202ENST00000394555 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
EFEMP1-202ENST00000394555 ABCC10Q5T3U5 1492 aa21.15■□□□□ 0.98
EFEMP1-202ENST00000394555 PRDM15P57071 1507 aaPredicted RBP21.14■□□□□ 0.98
EFEMP1-202ENST00000394555 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.98
EFEMP1-202ENST00000394555 BECN1Q14457 450 aa21.14■□□□□ 0.98
EFEMP1-202ENST00000394555 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms