RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 LRRC7Q96NW7 1537 aa17.83■□□□□ 0.45
VTI1BP2-201ENST00000394154 POTEAQ6S8J7 498 aa17.82■□□□□ 0.44
VTI1BP2-201ENST00000394154 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
VTI1BP2-201ENST00000394154 IQGAP1P46940 1657 aa17.82■□□□□ 0.44
VTI1BP2-201ENST00000394154 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
VTI1BP2-201ENST00000394154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
VTI1BP2-201ENST00000394154 THEMISQ8N1K5 641 aaPredicted RBP17.81■□□□□ 0.44
VTI1BP2-201ENST00000394154 STRCP1A6NGW2 1772 aa17.81■□□□□ 0.44
VTI1BP2-201ENST00000394154 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
VTI1BP2-201ENST00000394154 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
VTI1BP2-201ENST00000394154 KIAA1107Q9UPP5 1409 aa17.8■□□□□ 0.44
VTI1BP2-201ENST00000394154 PZPP20742 1482 aa17.78■□□□□ 0.44
VTI1BP2-201ENST00000394154 PLEKHH2Q8IVE3 1493 aa17.78■□□□□ 0.44
VTI1BP2-201ENST00000394154 UGGT1Q9NYU2 1555 aa17.78■□□□□ 0.44
VTI1BP2-201ENST00000394154 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.44
VTI1BP2-201ENST00000394154 NLRP1Q9C000 1473 aa17.77■□□□□ 0.44
VTI1BP2-201ENST00000394154 SETD1AO15047 1707 aaKnown RBP17.77■□□□□ 0.44
VTI1BP2-201ENST00000394154 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
VTI1BP2-201ENST00000394154 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
VTI1BP2-201ENST00000394154 GPATCH8Q9UKJ3 1502 aaKnown RBP17.74■□□□□ 0.43
VTI1BP2-201ENST00000394154 MIA2Q96PC5 1412 aa17.72■□□□□ 0.43
VTI1BP2-201ENST00000394154 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
VTI1BP2-201ENST00000394154 CASKIN1Q8WXD9 1431 aa17.71■□□□□ 0.43
VTI1BP2-201ENST00000394154 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
VTI1BP2-201ENST00000394154 ZC3H13Q5T200 1668 aaKnown RBP17.68■□□□□ 0.42
VTI1BP2-201ENST00000394154 CFDP1Q9UEE9 299 aaPredicted RBP17.68■□□□□ 0.42
VTI1BP2-201ENST00000394154 DHX29Q7Z478 1369 aaKnown RBP17.67■□□□□ 0.42
VTI1BP2-201ENST00000394154 XIRP1Q702N8 1843 aaKnown RBP17.66■□□□□ 0.42
VTI1BP2-201ENST00000394154 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
VTI1BP2-201ENST00000394154 RTEL1-TNFRSF6BF6WH68 1400 aa17.65■□□□□ 0.42
VTI1BP2-201ENST00000394154 WASHC2CQ9Y4E1 1318 aa17.65■□□□□ 0.42
VTI1BP2-201ENST00000394154 KIF3BO15066 747 aa17.64■□□□□ 0.41
VTI1BP2-201ENST00000394154 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
VTI1BP2-201ENST00000394154 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
VTI1BP2-201ENST00000394154 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
VTI1BP2-201ENST00000394154 FYCO1Q9BQS8 1478 aa17.61■□□□□ 0.41
VTI1BP2-201ENST00000394154 ROBO1Q9Y6N7 1651 aa17.61■□□□□ 0.41
VTI1BP2-201ENST00000394154 SCAF11Q99590 1463 aaKnown RBP17.6■□□□□ 0.41
VTI1BP2-201ENST00000394154 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
VTI1BP2-201ENST00000394154 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
VTI1BP2-201ENST00000394154 UBR1Q8IWV7 1749 aa17.56■□□□□ 0.4
VTI1BP2-201ENST00000394154 JCADQ9P266 1359 aa17.53■□□□□ 0.4
VTI1BP2-201ENST00000394154 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
VTI1BP2-201ENST00000394154 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
VTI1BP2-201ENST00000394154 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
VTI1BP2-201ENST00000394154 SLIT1O75093 1534 aa17.52■□□□□ 0.4
VTI1BP2-201ENST00000394154 ARHGAP23Q9P227 1491 aa17.52■□□□□ 0.4
VTI1BP2-201ENST00000394154 TMEM94Q12767 1356 aa17.52■□□□□ 0.39
VTI1BP2-201ENST00000394154 TIAM1Q13009 1591 aa17.51■□□□□ 0.39
VTI1BP2-201ENST00000394154 SRCAPQ6ZRS2 3230 aa17.51■□□□□ 0.39
VTI1BP2-201ENST00000394154 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
VTI1BP2-201ENST00000394154 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
VTI1BP2-201ENST00000394154 TXNDC2Q86VQ3 553 aa17.5■□□□□ 0.39
VTI1BP2-201ENST00000394154 TRIM52Q96A61 297 aa17.5■□□□□ 0.39
VTI1BP2-201ENST00000394154 ABCC3O15438 1527 aa17.5■□□□□ 0.39
VTI1BP2-201ENST00000394154 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
VTI1BP2-201ENST00000394154 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
VTI1BP2-201ENST00000394154 LTKP29376 864 aa17.49■□□□□ 0.39
VTI1BP2-201ENST00000394154 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
VTI1BP2-201ENST00000394154 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
VTI1BP2-201ENST00000394154 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
VTI1BP2-201ENST00000394154 MEX3CQ5U5Q3 659 aaKnown RBP17.45■□□□□ 0.38
VTI1BP2-201ENST00000394154 SPATA31A6Q5VVP1 1343 aa17.45■□□□□ 0.38
VTI1BP2-201ENST00000394154 LRP6O75581 1613 aa17.44■□□□□ 0.38
VTI1BP2-201ENST00000394154 RSPH4AQ5TD94 716 aa17.44■□□□□ 0.38
VTI1BP2-201ENST00000394154 COL16A1Q07092 1604 aaPredicted RBP17.43■□□□□ 0.38
VTI1BP2-201ENST00000394154 PRDM15P57071 1507 aaPredicted RBP17.43■□□□□ 0.38
VTI1BP2-201ENST00000394154 KCNA6P17658 529 aa17.43■□□□□ 0.38
VTI1BP2-201ENST00000394154 RXRBP28702 533 aa17.43■□□□□ 0.38
VTI1BP2-201ENST00000394154 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
VTI1BP2-201ENST00000394154 MSH6P52701 1360 aa17.42■□□□□ 0.38
VTI1BP2-201ENST00000394154 FGD6Q6ZV73 1430 aa17.42■□□□□ 0.38
VTI1BP2-201ENST00000394154 NKTRP30414 1462 aaKnown RBP17.42■□□□□ 0.38
VTI1BP2-201ENST00000394154 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
VTI1BP2-201ENST00000394154 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
VTI1BP2-201ENST00000394154 EIF2AK4Q9P2K8 1649 aaKnown RBP17.4■□□□□ 0.38
VTI1BP2-201ENST00000394154 CAMSAP2Q08AD1 1489 aa17.4■□□□□ 0.38
VTI1BP2-201ENST00000394154 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
VTI1BP2-201ENST00000394154 CEP152O94986 1710 aa17.39■□□□□ 0.37
VTI1BP2-201ENST00000394154 NWD1Q149M9 1564 aa17.39■□□□□ 0.37
VTI1BP2-201ENST00000394154 TMEM2Q9UHN6 1383 aa17.39■□□□□ 0.37
VTI1BP2-201ENST00000394154 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
VTI1BP2-201ENST00000394154 SHPRHQ149N8 1683 aa17.38■□□□□ 0.37
VTI1BP2-201ENST00000394154 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
VTI1BP2-201ENST00000394154 ARHGEF5Q12774 1597 aa17.37■□□□□ 0.37
VTI1BP2-201ENST00000394154 MROH1Q8NDA8 1641 aa17.37■□□□□ 0.37
VTI1BP2-201ENST00000394154 PIK3C2BO00750 1634 aa17.36■□□□□ 0.37
VTI1BP2-201ENST00000394154 TET3O43151 1660 aa17.36■□□□□ 0.37
VTI1BP2-201ENST00000394154 TSPY4P0CV99 314 aa17.35■□□□□ 0.37
VTI1BP2-201ENST00000394154 TSPY10P0CW01 314 aa17.35■□□□□ 0.37
VTI1BP2-201ENST00000394154 KDM5AP29375 1690 aaKnown RBP17.35■□□□□ 0.37
VTI1BP2-201ENST00000394154 MSH5O43196 834 aa17.34■□□□□ 0.37
VTI1BP2-201ENST00000394154 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.36
VTI1BP2-201ENST00000394154 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
VTI1BP2-201ENST00000394154 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
VTI1BP2-201ENST00000394154 AHDC1Q5TGY3 1603 aaPredicted RBP17.32■□□□□ 0.36
VTI1BP2-201ENST00000394154 EFCAB6Q5THR3 1501 aa17.31■□□□□ 0.36
VTI1BP2-201ENST00000394154 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
VTI1BP2-201ENST00000394154 RGS12O14924 1447 aa17.29■□□□□ 0.36
VTI1BP2-201ENST00000394154 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms