RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 TEX14Q8IWB6 1497 aa32.87■■■□□ 2.85
RARA-204ENST00000394089 KDM5CP41229 1560 aa32.87■■■□□ 2.85
RARA-204ENST00000394089 L3MBTL2Q969R5 705 aa32.86■■■□□ 2.85
RARA-204ENST00000394089 KIDINS220Q9ULH0 1771 aa32.84■■■□□ 2.85
RARA-204ENST00000394089 DIP2BQ9P265 1576 aa32.82■■■□□ 2.85
RARA-204ENST00000394089 DHX29Q7Z478 1369 aaKnown RBP32.82■■■□□ 2.84
RARA-204ENST00000394089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.82■■■□□ 2.849e-7■□□□□ 9.1
RARA-204ENST00000394089 MLH3Q9UHC1 1453 aa32.81■■■□□ 2.84
RARA-204ENST00000394089 EIF2AK4Q9P2K8 1649 aaKnown RBP32.8■■■□□ 2.84
RARA-204ENST00000394089 DEPDC5O75140 1603 aa32.8■■■□□ 2.84
RARA-204ENST00000394089 MYT1LQ9UL68 1186 aa32.78■■■□□ 2.84
RARA-204ENST00000394089 HECW2Q9P2P5 1572 aa32.75■■■□□ 2.83
RARA-204ENST00000394089 FAM69CQ0P6D2 419 aa32.73■■■□□ 2.83
RARA-204ENST00000394089 ATP10AO60312 1499 aa32.69■■■□□ 2.82
RARA-204ENST00000394089 A2MP01023 1474 aa32.69■■■□□ 2.82
RARA-204ENST00000394089 VWDEQ8N2E2 1590 aa32.69■■■□□ 2.82
RARA-204ENST00000394089 SUPT16HQ9Y5B9 1047 aaKnown RBP32.68■■■□□ 2.82
RARA-204ENST00000394089 PLA2R1Q13018 1463 aa32.68■■■□□ 2.82
RARA-204ENST00000394089 PRDM15P57071 1507 aaPredicted RBP32.66■■■□□ 2.82
RARA-204ENST00000394089 RICTORQ6R327 1708 aa32.66■■■□□ 2.82
RARA-204ENST00000394089 KANK1Q14678 1352 aa32.65■■■□□ 2.82
RARA-204ENST00000394089 KIF3BO15066 747 aa32.65■■■□□ 2.82
RARA-204ENST00000394089 CCDC144AA2RUR9 1427 aa32.64■■■□□ 2.81
RARA-204ENST00000394089 MROH1Q8NDA8 1641 aa32.63■■■□□ 2.81
RARA-204ENST00000394089 ANP32EQ9BTT0 268 aa32.63■■■□□ 2.81
RARA-204ENST00000394089 RAPGEF3O95398 923 aa32.62■■■□□ 2.81
RARA-204ENST00000394089 ABCA6Q8N139 1617 aa32.62■■■□□ 2.81
RARA-204ENST00000394089 NBPF8Q3BBV2 869 aa32.61■■■□□ 2.81
RARA-204ENST00000394089 FRMPD1Q5SYB0 1578 aa32.61■■■□□ 2.81
RARA-204ENST00000394089 TET3O43151 1660 aa32.61■■■□□ 2.81
RARA-204ENST00000394089 PPRC1Q5VV67 1664 aaKnown RBP32.6■■■□□ 2.81
RARA-204ENST00000394089 RNF17Q9BXT8 1623 aaKnown RBP32.6■■■□□ 2.81
RARA-204ENST00000394089 E9PCH4 1651 aa32.59■■■□□ 2.81
RARA-204ENST00000394089 BCORL1Q5H9F3 1711 aa32.58■■■□□ 2.81
RARA-204ENST00000394089 UHRF1BP1Q6BDS2 1440 aa32.56■■■□□ 2.8
RARA-204ENST00000394089 DIP2CQ9Y2E4 1556 aa32.54■■■□□ 2.8
RARA-204ENST00000394089 TSHZ2Q9NRE2 1034 aa32.53■■■□□ 2.8
RARA-204ENST00000394089 LMTK2Q8IWU2 1503 aa32.52■■■□□ 2.8
RARA-204ENST00000394089 PTPRTO14522 1441 aa32.52■■■□□ 2.8
RARA-204ENST00000394089 ZMYM4Q5VZL5 1548 aa32.52■■■□□ 2.8
RARA-204ENST00000394089 KIF13AQ9H1H9 1805 aa32.5■■■□□ 2.79
RARA-204ENST00000394089 TSPOAP1O95153 1857 aa32.5■■■□□ 2.79
RARA-204ENST00000394089 TRPM2O94759 1503 aa32.49■■■□□ 2.79
RARA-204ENST00000394089 HIRIP3Q9BW71 556 aaPredicted RBP32.49■■■□□ 2.79
RARA-204ENST00000394089 EIF4G2P78344 907 aaKnown RBP eCLIP32.48■■■□□ 2.791e-6■■■■■ 32.1
RARA-204ENST00000394089 SPHKAPQ2M3C7 1700 aa32.46■■■□□ 2.79
RARA-204ENST00000394089 HSPA5P11021 654 aaKnown RBP32.46■■■□□ 2.79
RARA-204ENST00000394089 EFCAB6Q5THR3 1501 aa32.45■■■□□ 2.78
RARA-204ENST00000394089 YEATS2Q9ULM3 1422 aa32.42■■■□□ 2.78
RARA-204ENST00000394089 DCAF11Q8TEB1 546 aa32.41■■■□□ 2.78
RARA-204ENST00000394089 RALGAPBQ86X10 1494 aa32.41■■■□□ 2.78
RARA-204ENST00000394089 CEP152O94986 1710 aa32.38■■■□□ 2.77
RARA-204ENST00000394089 SPATA31E1Q6ZUB1 1445 aa32.38■■■□□ 2.77
RARA-204ENST00000394089 ZNF326Q5BKZ1 582 aaKnown RBP32.36■■■□□ 2.77
RARA-204ENST00000394089 BCL11AQ9H165 835 aa32.36■■■□□ 2.77
RARA-204ENST00000394089 KDM2AQ9Y2K7 1162 aa32.34■■■□□ 2.77
RARA-204ENST00000394089 CLTCL1P53675 1640 aa32.34■■■□□ 2.77
RARA-204ENST00000394089 GGT6Q6P531 493 aa32.34■■■□□ 2.77
RARA-204ENST00000394089 RGL3Q3MIN7 710 aa32.33■■■□□ 2.77
RARA-204ENST00000394089 ABCC3O15438 1527 aa32.33■■■□□ 2.77
RARA-204ENST00000394089 DDX10Q13206 875 aaKnown RBP32.33■■■□□ 2.77
RARA-204ENST00000394089 PRAG1Q86YV5 1406 aa32.33■■■□□ 2.77
RARA-204ENST00000394089 NEURL4Q96JN8 1562 aa32.31■■■□□ 2.76
RARA-204ENST00000394089 REREQ9P2R6 1566 aa32.3■■■□□ 2.76
RARA-204ENST00000394089 WASHC2CQ9Y4E1 1318 aa32.27■■■□□ 2.76
RARA-204ENST00000394089 NPATQ14207 1427 aa32.25■■■□□ 2.75
RARA-204ENST00000394089 ZC3H13Q5T200 1668 aaKnown RBP32.25■■■□□ 2.75
RARA-204ENST00000394089 USP47Q96K76 1375 aa32.25■■■□□ 2.75
RARA-204ENST00000394089 TRPM1Q7Z4N2 1603 aa32.24■■■□□ 2.75
RARA-204ENST00000394089 CAMSAP1Q5T5Y3 1602 aa32.23■■■□□ 2.75
RARA-204ENST00000394089 COL17A1Q9UMD9 1497 aaPredicted RBP32.23■■■□□ 2.75
RARA-204ENST00000394089 STAC3Q96MF2 364 aa32.23■■■□□ 2.75
RARA-204ENST00000394089 WASHC2AQ641Q2 1341 aa32.22■■■□□ 2.75
RARA-204ENST00000394089 AGLP35573 1532 aa32.21■■■□□ 2.75
RARA-204ENST00000394089 CARD11Q9BXL7 1154 aa32.2■■■□□ 2.75
RARA-204ENST00000394089 ARHGAP31Q2M1Z3 1444 aa32.19■■■□□ 2.74
RARA-204ENST00000394089 CNTLNQ9NXG0 1405 aa32.19■■■□□ 2.74
RARA-204ENST00000394089 ROCK2O75116 1388 aaKnown RBP32.18■■■□□ 2.74
RARA-204ENST00000394089 GPRASP1Q5JY77 1395 aa32.17■■■□□ 2.74
RARA-204ENST00000394089 UGGT1Q9NYU2 1555 aa32.17■■■□□ 2.74
RARA-204ENST00000394089 CCDC7Q96M83 1385 aa32.16■■■□□ 2.74
RARA-204ENST00000394089 LAMC1P11047 1609 aa32.15■■■□□ 2.74
RARA-204ENST00000394089 POLR1AO95602 1720 aaPredicted RBP32.15■■■□□ 2.74
RARA-204ENST00000394089 KIF1BO60333 1816 aa32.15■■■□□ 2.74
RARA-204ENST00000394089 ARHGEF40Q8TER5 1519 aa32.14■■■□□ 2.74
RARA-204ENST00000394089 NOS1P29475 1434 aa32.13■■■□□ 2.73
RARA-204ENST00000394089 C11orf95C9JLR9 678 aaPredicted RBP32.13■■■□□ 2.73
RARA-204ENST00000394089 MADDQ8WXG6 1647 aa32.12■■■□□ 2.73
RARA-204ENST00000394089 PPP6R1Q9UPN7 881 aa32.1■■■□□ 2.73
RARA-204ENST00000394089 ADGRB3O60242 1522 aa32.08■■■□□ 2.73
RARA-204ENST00000394089 SIGLEC1Q9BZZ2 1709 aa32.07■■■□□ 2.73
RARA-204ENST00000394089 KIF7Q2M1P5 1343 aa32.06■■■□□ 2.72
RARA-204ENST00000394089 NBPF1Q3BBV0 1214 aa32.05■■■□□ 2.72
RARA-204ENST00000394089 MYOM2P54296 1465 aa32.05■■■□□ 2.72
RARA-204ENST00000394089 ARID4BQ4LE39 1312 aaPredicted RBP32.04■■■□□ 2.72
RARA-204ENST00000394089 MROH2AA6NES4 1674 aa32.04■■■□□ 2.72
RARA-204ENST00000394089 PIK3C2BO00750 1634 aa32.03■■■□□ 2.72
RARA-204ENST00000394089 IFT172Q9UG01 1749 aa32.02■■■□□ 2.72
RARA-204ENST00000394089 SYNMO15061 1565 aa32.02■■■□□ 2.72
RARA-204ENST00000394089 CFAP65Q6ZU64 1925 aaKnown RBP32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms