RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 NUP155O75694 1391 aa35.81■■■■□ 3.32
LRFN4-202ENST00000393952 PZPP20742 1482 aa35.8■■■■□ 3.32
LRFN4-202ENST00000393952 DEPDC5O75140 1603 aa35.8■■■■□ 3.32
LRFN4-202ENST00000393952 BCORL1Q5H9F3 1711 aa35.78■■■■□ 3.32
LRFN4-202ENST00000393952 REREQ9P2R6 1566 aa35.78■■■■□ 3.32
LRFN4-202ENST00000393952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.77■■■■□ 3.32
LRFN4-202ENST00000393952 MPHOSPH9Q99550 1183 aa35.76■■■■□ 3.32
LRFN4-202ENST00000393952 RNF17Q9BXT8 1623 aaKnown RBP35.74■■■■□ 3.31
LRFN4-202ENST00000393952 MROH1Q8NDA8 1641 aa35.73■■■■□ 3.31
LRFN4-202ENST00000393952 IQGAP3Q86VI3 1631 aa35.72■■■■□ 3.31
LRFN4-202ENST00000393952 SLC4A1APQ9BWU0 796 aaKnown RBP35.72■■■■□ 3.31
LRFN4-202ENST00000393952 FAM135AQ9P2D6 1515 aa35.72■■■■□ 3.31
LRFN4-202ENST00000393952 SIGLEC1Q9BZZ2 1709 aa35.71■■■■□ 3.31
LRFN4-202ENST00000393952 PRDM15P57071 1507 aaPredicted RBP35.7■■■■□ 3.3
LRFN4-202ENST00000393952 AGLP35573 1532 aa35.67■■■■□ 3.3
LRFN4-202ENST00000393952 VWDEQ8N2E2 1590 aa35.66■■■■□ 3.3
LRFN4-202ENST00000393952 CLSPNQ9HAW4 1339 aa35.63■■■■□ 3.29
LRFN4-202ENST00000393952 GGT6Q6P531 493 aa35.63■■■■□ 3.29
LRFN4-202ENST00000393952 KANK1Q14678 1352 aa35.63■■■■□ 3.29
LRFN4-202ENST00000393952 PKD2Q13563 968 aa35.6■■■■□ 3.29
LRFN4-202ENST00000393952 FOXD1Q16676 465 aa35.59■■■■□ 3.29
LRFN4-202ENST00000393952 CEP152O94986 1710 aa35.56■■■■□ 3.28
LRFN4-202ENST00000393952 TET3O43151 1660 aa35.54■■■■□ 3.28
LRFN4-202ENST00000393952 LMTK2Q8IWU2 1503 aa35.51■■■■□ 3.27
LRFN4-202ENST00000393952 ABCC3O15438 1527 aa35.5■■■■□ 3.27
LRFN4-202ENST00000393952 ANKRD30BQ9BXX2 1392 aa35.48■■■■□ 3.27
LRFN4-202ENST00000393952 E9PCH4 1651 aa35.47■■■■□ 3.27
LRFN4-202ENST00000393952 ARID4BQ4LE39 1312 aaPredicted RBP35.47■■■■□ 3.27
LRFN4-202ENST00000393952 WASHC2CQ9Y4E1 1318 aa35.46■■■■□ 3.27
LRFN4-202ENST00000393952 MLECQ14165 292 aa35.46■■■■□ 3.27
LRFN4-202ENST00000393952 ZC3H13Q5T200 1668 aaKnown RBP35.45■■■■□ 3.27
LRFN4-202ENST00000393952 SIN3AQ96ST3 1273 aa35.45■■■■□ 3.27
LRFN4-202ENST00000393952 EFCAB6Q5THR3 1501 aa35.44■■■■□ 3.26
LRFN4-202ENST00000393952 CAMSAP1Q5T5Y3 1602 aa35.41■■■■□ 3.26
LRFN4-202ENST00000393952 ZEB1P37275 1124 aaPredicted RBP35.4■■■■□ 3.26
LRFN4-202ENST00000393952 NEUROD1Q13562 356 aa35.38■■■■□ 3.25
LRFN4-202ENST00000393952 PPP6R1Q9UPN7 881 aa35.38■■■■□ 3.25
LRFN4-202ENST00000393952 CLTCQ00610 1675 aaKnown RBP35.35■■■■□ 3.25
LRFN4-202ENST00000393952 PLA2R1Q13018 1463 aa35.34■■■■□ 3.25
LRFN4-202ENST00000393952 NPATQ14207 1427 aa35.32■■■■□ 3.24
LRFN4-202ENST00000393952 SPHKAPQ2M3C7 1700 aa35.31■■■■□ 3.24
LRFN4-202ENST00000393952 RPRD2Q5VT52 1461 aaKnown RBP35.3■■■■□ 3.24
LRFN4-202ENST00000393952 CFAP65Q6ZU64 1925 aaKnown RBP35.28■■■■□ 3.24
LRFN4-202ENST00000393952 ARHGAP31Q2M1Z3 1444 aa35.27■■■■□ 3.24
LRFN4-202ENST00000393952 PTPRTO14522 1441 aa35.27■■■■□ 3.24
LRFN4-202ENST00000393952 TRPM2O94759 1503 aa35.25■■■■□ 3.23
LRFN4-202ENST00000393952 ESF1Q9H501 851 aaKnown RBP35.24■■■■□ 3.23
LRFN4-202ENST00000393952 CCDC144AA2RUR9 1427 aa35.21■■■■□ 3.23
LRFN4-202ENST00000393952 FER1L4A9Z1Z3 1794 aa35.19■■■■□ 3.22
LRFN4-202ENST00000393952 CNTLNQ9NXG0 1405 aa35.18■■■■□ 3.22
LRFN4-202ENST00000393952 PREX1Q8TCU6 1659 aa35.16■■■■□ 3.22
LRFN4-202ENST00000393952 CLTCL1P53675 1640 aa35.16■■■■□ 3.22
LRFN4-202ENST00000393952 MROH2AA6NES4 1674 aa35.15■■■■□ 3.22
LRFN4-202ENST00000393952 TONSLQ96HA7 1378 aa35.15■■■■□ 3.22
LRFN4-202ENST00000393952 NOS1P29475 1434 aa35.15■■■■□ 3.22
LRFN4-202ENST00000393952 ZMYM3Q14202 1370 aa35.14■■■■□ 3.22
LRFN4-202ENST00000393952 UGGT1Q9NYU2 1555 aa35.13■■■■□ 3.21
LRFN4-202ENST00000393952 TIMELESSQ9UNS1 1208 aa35.12■■■■□ 3.21
LRFN4-202ENST00000393952 SYNMO15061 1565 aa35.11■■■■□ 3.21
LRFN4-202ENST00000393952 ERVK-7P63135 1459 aa35.1■■■■□ 3.21
LRFN4-202ENST00000393952 FBXO31Q5XUX0 539 aaPredicted RBP35.09■■■■□ 3.21
LRFN4-202ENST00000393952 MADDQ8WXG6 1647 aa35.09■■■■□ 3.21
LRFN4-202ENST00000393952 ADAMTSL3P82987 1691 aa35.09■■■■□ 3.21
LRFN4-202ENST00000393952 SPATA31D1Q6ZQQ2 1576 aa35.04■■■■□ 3.2
LRFN4-202ENST00000393952 RIMS1Q86UR5 1692 aaKnown RBP35.03■■■■□ 3.2
LRFN4-202ENST00000393952 PIK3C2BO00750 1634 aa35.03■■■■□ 3.2
LRFN4-202ENST00000393952 L3MBTL2Q969R5 705 aa35.03■■■■□ 3.2
LRFN4-202ENST00000393952 C3P01024 1663 aa35.03■■■■□ 3.2
LRFN4-202ENST00000393952 KIF1BO60333 1816 aa35■■■■□ 3.19
LRFN4-202ENST00000393952 SPATA31E1Q6ZUB1 1445 aa34.98■■■■□ 3.19
LRFN4-202ENST00000393952 CEBPAP49715 358 aaPredicted RBP34.96■■■■□ 3.19
LRFN4-202ENST00000393952 PPP1R15AO75807 674 aaPredicted RBP34.95■■■■□ 3.18
LRFN4-202ENST00000393952 RGL3Q3MIN7 710 aa34.95■■■■□ 3.18
LRFN4-202ENST00000393952 SLC52A1Q9NWF4 448 aa34.93■■■■□ 3.18
LRFN4-202ENST00000393952 IDI1Q13907 227 aa34.92■■■■□ 3.18
LRFN4-202ENST00000393952 NEURL4Q96JN8 1562 aa34.92■■■■□ 3.18
LRFN4-202ENST00000393952 ADGRB3O60242 1522 aa34.9■■■■□ 3.18
LRFN4-202ENST00000393952 PLPPR3Q6T4P5 718 aa34.9■■■■□ 3.18
LRFN4-202ENST00000393952 TNRQ92752 1358 aa34.9■■■■□ 3.18
LRFN4-202ENST00000393952 CHGAP10645 457 aaKnown RBP34.88■■■■□ 3.17
LRFN4-202ENST00000393952 DCAF11Q8TEB1 546 aa34.85■■■■□ 3.17
LRFN4-202ENST00000393952 TMEM131LA2VDJ0 1609 aa34.83■■■■□ 3.17
LRFN4-202ENST00000393952 MYO5BQ9ULV0 1848 aa34.82■■■■□ 3.16
LRFN4-202ENST00000393952 KDM2AQ9Y2K7 1162 aa34.82■■■■□ 3.16
LRFN4-202ENST00000393952 ZNF326Q5BKZ1 582 aaKnown RBP34.78■■■■□ 3.16
LRFN4-202ENST00000393952 PTPRMP28827 1452 aa34.76■■■■□ 3.16
LRFN4-202ENST00000393952 IFT172Q9UG01 1749 aa34.76■■■■□ 3.16
LRFN4-202ENST00000393952 NBPF8Q3BBV2 869 aa34.75■■■■□ 3.15
LRFN4-202ENST00000393952 NLRP1Q9C000 1473 aa34.74■■■■□ 3.15
LRFN4-202ENST00000393952 UHRF1BP1Q6BDS2 1440 aa34.73■■■■□ 3.15
LRFN4-202ENST00000393952 PPLO60437 1756 aa34.72■■■■□ 3.15
LRFN4-202ENST00000393952 STAG3Q9UJ98 1225 aa34.72■■■■□ 3.15
LRFN4-202ENST00000393952 A2ML1A8K2U0 1454 aa34.72■■■■□ 3.15
LRFN4-202ENST00000393952 MYO3AQ8NEV4 1616 aa34.71■■■■□ 3.15
LRFN4-202ENST00000393952 NEXMIFQ5QGS0 1516 aa34.68■■■■□ 3.14
LRFN4-202ENST00000393952 RPGRIP1LQ68CZ1 1315 aa34.68■■■■□ 3.14
LRFN4-202ENST00000393952 PRAG1Q86YV5 1406 aa34.68■■■■□ 3.14
LRFN4-202ENST00000393952 UBR1Q8IWV7 1749 aa34.68■■■■□ 3.14
LRFN4-202ENST00000393952 KDM5AP29375 1690 aaKnown RBP34.67■■■■□ 3.14
LRFN4-202ENST00000393952 MYOM2P54296 1465 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms