RNA–Protein interactions for RNA: ENST00000393600.7

FAM50A-202, Transcript of family with sequence similarity 50 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM50A, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-202ENST00000393600 EIF2AK4Q9P2K8 1649 aaKnown RBP28.32■■■□□ 2.12
FAM50A-202ENST00000393600 ANKRD30AQ9BXX3 1397 aa28.31■■■□□ 2.12
FAM50A-202ENST00000393600 ITGAEP38570 1179 aa28.3■■■□□ 2.12
FAM50A-202ENST00000393600 ERBINQ96RT1 1412 aa28.3■■■□□ 2.12
FAM50A-202ENST00000393600 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
FAM50A-202ENST00000393600 LMTK3Q96Q04 1460 aa28.29■■■□□ 2.12
FAM50A-202ENST00000393600 ZMYM3Q14202 1370 aa28.28■■■□□ 2.12
FAM50A-202ENST00000393600 MROH2AA6NES4 1674 aa28.27■■■□□ 2.12
FAM50A-202ENST00000393600 ABCC3O15438 1527 aa28.25■■■□□ 2.11
FAM50A-202ENST00000393600 KDM5DQ9BY66 1539 aa28.25■■■□□ 2.11
FAM50A-202ENST00000393600 ROCK1Q13464 1354 aa28.23■■■□□ 2.11
FAM50A-202ENST00000393600 PRDM15P57071 1507 aaPredicted RBP28.23■■■□□ 2.11
FAM50A-202ENST00000393600 DEPDC5O75140 1603 aa28.22■■■□□ 2.11
FAM50A-202ENST00000393600 ANKRD50Q9ULJ7 1429 aa28.2■■■□□ 2.1
FAM50A-202ENST00000393600 PPP6R1Q9UPN7 881 aa28.2■■■□□ 2.1
FAM50A-202ENST00000393600 ESF1Q9H501 851 aaKnown RBP28.19■■■□□ 2.1
FAM50A-202ENST00000393600 FAM135AQ9P2D6 1515 aa28.17■■■□□ 2.1
FAM50A-202ENST00000393600 VWDEQ8N2E2 1590 aa28.17■■■□□ 2.1
FAM50A-202ENST00000393600 FBXO31Q5XUX0 539 aaPredicted RBP28.16■■■□□ 2.1
FAM50A-202ENST00000393600 WASHC2CQ9Y4E1 1318 aa28.16■■■□□ 2.1
FAM50A-202ENST00000393600 CEP152O94986 1710 aa28.16■■■□□ 2.1
FAM50A-202ENST00000393600 HSPA2P54652 639 aa28.14■■■□□ 2.1
FAM50A-202ENST00000393600 PZPP20742 1482 aa28.13■■■□□ 2.09
FAM50A-202ENST00000393600 NPATQ14207 1427 aa28.13■■■□□ 2.09
FAM50A-202ENST00000393600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.11■■■□□ 2.096e-8■■■□□ 17.3
FAM50A-202ENST00000393600 PREX1Q8TCU6 1659 aa28.11■■■□□ 2.09
FAM50A-202ENST00000393600 ZC3H13Q5T200 1668 aaKnown RBP28.1■■■□□ 2.09
FAM50A-202ENST00000393600 NAIPQ13075 1403 aa28.09■■■□□ 2.09
FAM50A-202ENST00000393600 CAMSAP1Q5T5Y3 1602 aa28.09■■■□□ 2.09
FAM50A-202ENST00000393600 UNC13BO14795 1591 aa28.07■■■□□ 2.08
FAM50A-202ENST00000393600 LMTK2Q8IWU2 1503 aa28.06■■■□□ 2.08
FAM50A-202ENST00000393600 MYO3AQ8NEV4 1616 aa28.05■■■□□ 2.08
FAM50A-202ENST00000393600 UHRF1BP1Q6BDS2 1440 aa28.05■■■□□ 2.08
FAM50A-202ENST00000393600 ERVK-7P63135 1459 aa28.03■■■□□ 2.08
FAM50A-202ENST00000393600 SPATA31D1Q6ZQQ2 1576 aa28.01■■■□□ 2.08
FAM50A-202ENST00000393600 TNRQ92752 1358 aa28■■■□□ 2.07
FAM50A-202ENST00000393600 HFM1A2PYH4 1435 aa28■■■□□ 2.07
FAM50A-202ENST00000393600 ARHGAP31Q2M1Z3 1444 aa28■■■□□ 2.07
FAM50A-202ENST00000393600 SETD1BQ9UPS6 1966 aaKnown RBP28■■■□□ 2.07
FAM50A-202ENST00000393600 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
FAM50A-202ENST00000393600 EFCAB6Q5THR3 1501 aa27.99■■■□□ 2.07
FAM50A-202ENST00000393600 CEP170BQ9Y4F5 1589 aaPredicted RBP27.96■■■□□ 2.07
FAM50A-202ENST00000393600 ZNF142P52746 1687 aaPredicted RBP27.96■■■□□ 2.07
FAM50A-202ENST00000393600 KANK1Q14678 1352 aa27.95■■■□□ 2.07
FAM50A-202ENST00000393600 IQGAP3Q86VI3 1631 aa27.93■■■□□ 2.06
FAM50A-202ENST00000393600 A2ML1A8K2U0 1454 aa27.91■■■□□ 2.06
FAM50A-202ENST00000393600 SYNMO15061 1565 aa27.9■■■□□ 2.06
FAM50A-202ENST00000393600 STRCQ7RTU9 1775 aa27.9■■■□□ 2.06
FAM50A-202ENST00000393600 TET3O43151 1660 aa27.89■■■□□ 2.06
FAM50A-202ENST00000393600 NUP155O75694 1391 aa27.89■■■□□ 2.06
FAM50A-202ENST00000393600 NOS1P29475 1434 aa27.89■■■□□ 2.05
FAM50A-202ENST00000393600 CFAP65Q6ZU64 1925 aaKnown RBP27.88■■■□□ 2.05
FAM50A-202ENST00000393600 E9PCH4 1651 aa27.85■■■□□ 2.05
FAM50A-202ENST00000393600 NLRP1Q9C000 1473 aa27.85■■■□□ 2.05
FAM50A-202ENST00000393600 RPRD2Q5VT52 1461 aaKnown RBP27.8■■■□□ 2.04
FAM50A-202ENST00000393600 UGGT1Q9NYU2 1555 aa27.8■■■□□ 2.04
FAM50A-202ENST00000393600 NCKAP5LQ9HCH0 1330 aa27.79■■■□□ 2.04
FAM50A-202ENST00000393600 PIK3C2BO00750 1634 aa27.77■■■□□ 2.04
FAM50A-202ENST00000393600 PLA2R1Q13018 1463 aa27.77■■■□□ 2.04
FAM50A-202ENST00000393600 IDI1Q13907 227 aa27.75■■■□□ 2.03
FAM50A-202ENST00000393600 UBR1Q8IWV7 1749 aa27.75■■■□□ 2.03
FAM50A-202ENST00000393600 NEURL4Q96JN8 1562 aa27.74■■■□□ 2.03
FAM50A-202ENST00000393600 SETD5Q9C0A6 1442 aa27.72■■■□□ 2.03
FAM50A-202ENST00000393600 RAB3GAP2Q9H2M9 1393 aa27.7■■■□□ 2.02
FAM50A-202ENST00000393600 PTPRTO14522 1441 aa27.69■■■□□ 2.02
FAM50A-202ENST00000393600 TRIM52Q96A61 297 aa27.68■■■□□ 2.02
FAM50A-202ENST00000393600 ARHGAP23Q9P227 1491 aa27.67■■■□□ 2.02
FAM50A-202ENST00000393600 ADGRB3O60242 1522 aa27.66■■■□□ 2.02
FAM50A-202ENST00000393600 FOXD1Q16676 465 aa27.64■■■□□ 2.02
FAM50A-202ENST00000393600 PKD2Q13563 968 aa27.63■■■□□ 2.01
FAM50A-202ENST00000393600 THEMISQ8N1K5 641 aaPredicted RBP27.63■■■□□ 2.01
FAM50A-202ENST00000393600 SLIT1O75093 1534 aa27.63■■■□□ 2.01
FAM50A-202ENST00000393600 LTKP29376 864 aa27.62■■■□□ 2.01
FAM50A-202ENST00000393600 TMEM131LA2VDJ0 1609 aa27.61■■■□□ 2.01
FAM50A-202ENST00000393600 SPHKAPQ2M3C7 1700 aa27.61■■■□□ 2.01
FAM50A-202ENST00000393600 SLC52A1Q9NWF4 448 aa27.6■■■□□ 2.01
FAM50A-202ENST00000393600 POLR1AO95602 1720 aaPredicted RBP27.6■■■□□ 2.01
FAM50A-202ENST00000393600 SLC4A1APQ9BWU0 796 aaKnown RBP27.6■■■□□ 2.01
FAM50A-202ENST00000393600 TMEM2Q9UHN6 1383 aa27.59■■■□□ 2.01
FAM50A-202ENST00000393600 CLTCL1P53675 1640 aa27.58■■■□□ 2.01
FAM50A-202ENST00000393600 KDM5AP29375 1690 aaKnown RBP27.58■■■□□ 2.01
FAM50A-202ENST00000393600 TRPM2O94759 1503 aa27.58■■■□□ 2.01
FAM50A-202ENST00000393600 MED14O60244 1454 aa27.57■■■□□ 2
FAM50A-202ENST00000393600 MYO5BQ9ULV0 1848 aa27.57■■■□□ 2
FAM50A-202ENST00000393600 MPHOSPH9Q99550 1183 aa27.56■■■□□ 2
FAM50A-202ENST00000393600 ZFYVE9O95405 1425 aa27.54■■■□□ 2
FAM50A-202ENST00000393600 SCAF11Q99590 1463 aaKnown RBP27.54■■■□□ 2
FAM50A-202ENST00000393600 ANKLE2Q86XL3 938 aa27.54■■■□□ 2
FAM50A-202ENST00000393600 NPHP4O75161 1426 aaPredicted RBP27.54■■■□□ 2
FAM50A-202ENST00000393600 LTBP4Q8N2S1 1624 aa27.52■■■□□ 2
FAM50A-202ENST00000393600 DMRT2Q9Y5R5 561 aa27.51■■□□□ 1.99
FAM50A-202ENST00000393600 ZNF335Q9H4Z2 1342 aaPredicted RBP27.51■■□□□ 1.99
FAM50A-202ENST00000393600 TXNDC2Q86VQ3 553 aa27.49■■□□□ 1.99
FAM50A-202ENST00000393600 STAG3Q9UJ98 1225 aa27.48■■□□□ 1.99
FAM50A-202ENST00000393600 IQGAP1P46940 1657 aa27.47■■□□□ 1.99
FAM50A-202ENST00000393600 RIMS2Q9UQ26 1411 aa27.46■■□□□ 1.99
FAM50A-202ENST00000393600 CHGAP10645 457 aaKnown RBP27.46■■□□□ 1.99
FAM50A-202ENST00000393600 NUTM2DQ5VT03 806 aaPredicted RBP27.44■■□□□ 1.98
FAM50A-202ENST00000393600 SENP3Q9H4L4 574 aaPredicted RBP27.44■■□□□ 1.98
FAM50A-202ENST00000393600 HRCP23327 699 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms