RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 UNC13BO14795 1591 aa21.26■□□□□ 0.99
MKS1-202ENST00000393119 HSPA5P11021 654 aaKnown RBP21.26■□□□□ 0.99
MKS1-202ENST00000393119 INO80Q9ULG1 1556 aaPredicted RBP21.26■□□□□ 0.99
MKS1-202ENST00000393119 POGZQ7Z3K3 1410 aa21.23■□□□□ 0.99
MKS1-202ENST00000393119 ZNF518AQ6AHZ1 1483 aa21.23■□□□□ 0.99
MKS1-202ENST00000393119 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
MKS1-202ENST00000393119 DHX29Q7Z478 1369 aaKnown RBP21.22■□□□□ 0.99
MKS1-202ENST00000393119 KIDINS220Q9ULH0 1771 aa21.22■□□□□ 0.99
MKS1-202ENST00000393119 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
MKS1-202ENST00000393119 MAGI2Q86UL8 1455 aa21.2■□□□□ 0.98
MKS1-202ENST00000393119 IQGAP3Q86VI3 1631 aa21.19■□□□□ 0.98
MKS1-202ENST00000393119 GGT6Q6P531 493 aa21.18■□□□□ 0.98
MKS1-202ENST00000393119 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
MKS1-202ENST00000393119 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
MKS1-202ENST00000393119 MAP3K4Q9Y6R4 1608 aa21.16■□□□□ 0.98
MKS1-202ENST00000393119 EIF4G2P78344 907 aaKnown RBP eCLIP21.15■□□□□ 0.98
MKS1-202ENST00000393119 DIP2BQ9P265 1576 aa21.14■□□□□ 0.97
MKS1-202ENST00000393119 TSPOAP1O95153 1857 aa21.14■□□□□ 0.97
MKS1-202ENST00000393119 A2MP01023 1474 aa21.13■□□□□ 0.97
MKS1-202ENST00000393119 NEO1Q92859 1461 aa21.13■□□□□ 0.97
MKS1-202ENST00000393119 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
MKS1-202ENST00000393119 KDM5CP41229 1560 aa21.13■□□□□ 0.97
MKS1-202ENST00000393119 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
MKS1-202ENST00000393119 FRMPD1Q5SYB0 1578 aa21.11■□□□□ 0.97
MKS1-202ENST00000393119 MLH3Q9UHC1 1453 aa21.11■□□□□ 0.97
MKS1-202ENST00000393119 CFAP74Q9C0B2 1584 aa21.1■□□□□ 0.97
MKS1-202ENST00000393119 MROH1Q8NDA8 1641 aa21.1■□□□□ 0.97
MKS1-202ENST00000393119 ABCA6Q8N139 1617 aa21.09■□□□□ 0.97
MKS1-202ENST00000393119 E9PCH4 1651 aa21.09■□□□□ 0.97
MKS1-202ENST00000393119 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
MKS1-202ENST00000393119 GLI2P10070 1586 aa21.09■□□□□ 0.97
MKS1-202ENST00000393119 HECW2Q9P2P5 1572 aa21.08■□□□□ 0.96
MKS1-202ENST00000393119 ATP10AO60312 1499 aa21.08■□□□□ 0.96
MKS1-202ENST00000393119 DEPDC5O75140 1603 aa21.07■□□□□ 0.96
MKS1-202ENST00000393119 KANK1Q14678 1352 aa21.07■□□□□ 0.96
MKS1-202ENST00000393119 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
MKS1-202ENST00000393119 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
MKS1-202ENST00000393119 UGGT1Q9NYU2 1555 aa21.04■□□□□ 0.96
MKS1-202ENST00000393119 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
MKS1-202ENST00000393119 VWDEQ8N2E2 1590 aa21.03■□□□□ 0.96
MKS1-202ENST00000393119 SPATA31E1Q6ZUB1 1445 aa21.03■□□□□ 0.96
MKS1-202ENST00000393119 RICTORQ6R327 1708 aa21.03■□□□□ 0.96
MKS1-202ENST00000393119 PPRC1Q5VV67 1664 aaKnown RBP21.02■□□□□ 0.96
MKS1-202ENST00000393119 PRDM15P57071 1507 aaPredicted RBP21.02■□□□□ 0.96
MKS1-202ENST00000393119 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.95
MKS1-202ENST00000393119 UHRF1BP1Q6BDS2 1440 aa21.01■□□□□ 0.95
MKS1-202ENST00000393119 USP47Q96K76 1375 aa21.01■□□□□ 0.95
MKS1-202ENST00000393119 POLR3GLQ9BT43 218 aa21.01■□□□□ 0.95
MKS1-202ENST00000393119 WASHC2CQ9Y4E1 1318 aa21■□□□□ 0.95
MKS1-202ENST00000393119 DIP2CQ9Y2E4 1556 aa21■□□□□ 0.95
MKS1-202ENST00000393119 EIF2AK4Q9P2K8 1649 aaKnown RBP20.99■□□□□ 0.95
MKS1-202ENST00000393119 PTPRTO14522 1441 aa20.99■□□□□ 0.95
MKS1-202ENST00000393119 PRAG1Q86YV5 1406 aa20.98■□□□□ 0.95
MKS1-202ENST00000393119 TET3O43151 1660 aa20.97■□□□□ 0.95
MKS1-202ENST00000393119 CEP152O94986 1710 aa20.97■□□□□ 0.95
MKS1-202ENST00000393119 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
MKS1-202ENST00000393119 ST20-MTHFSA0A0A6YYL1 179 aa20.96■□□□□ 0.95
MKS1-202ENST00000393119 KIF7Q2M1P5 1343 aa20.96■□□□□ 0.95
MKS1-202ENST00000393119 ROCK2O75116 1388 aaKnown RBP20.96■□□□□ 0.95
MKS1-202ENST00000393119 RALGAPBQ86X10 1494 aa20.95■□□□□ 0.94
MKS1-202ENST00000393119 CHGAP10645 457 aaKnown RBP20.95■□□□□ 0.94
MKS1-202ENST00000393119 CCDC7Q96M83 1385 aa20.95■□□□□ 0.94
MKS1-202ENST00000393119 TRPM2O94759 1503 aa20.95■□□□□ 0.94
MKS1-202ENST00000393119 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
MKS1-202ENST00000393119 NPATQ14207 1427 aa20.94■□□□□ 0.94
MKS1-202ENST00000393119 KIF13AQ9H1H9 1805 aa20.94■□□□□ 0.94
MKS1-202ENST00000393119 CNGB1Q14028 1251 aaPredicted RBP20.93■□□□□ 0.94
MKS1-202ENST00000393119 MLECQ14165 292 aa20.93■□□□□ 0.94
MKS1-202ENST00000393119 SPHKAPQ2M3C7 1700 aa20.93■□□□□ 0.94
MKS1-202ENST00000393119 EFCAB6Q5THR3 1501 aa20.92■□□□□ 0.94
MKS1-202ENST00000393119 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
MKS1-202ENST00000393119 RNF17Q9BXT8 1623 aaKnown RBP20.92■□□□□ 0.94
MKS1-202ENST00000393119 BCORL1Q5H9F3 1711 aa20.9■□□□□ 0.94
MKS1-202ENST00000393119 ABCC3O15438 1527 aa20.89■□□□□ 0.93
MKS1-202ENST00000393119 NUTM2DQ5VT03 806 aaPredicted RBP20.88■□□□□ 0.93
MKS1-202ENST00000393119 ANP32CO43423 234 aa20.87■□□□□ 0.93
MKS1-202ENST00000393119 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
MKS1-202ENST00000393119 LMTK2Q8IWU2 1503 aa20.87■□□□□ 0.93
MKS1-202ENST00000393119 ADGRF5Q8IZF2 1346 aa20.86■□□□□ 0.93
MKS1-202ENST00000393119 TRPM1Q7Z4N2 1603 aa20.85■□□□□ 0.93
MKS1-202ENST00000393119 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
MKS1-202ENST00000393119 TRHP20396 242 aaPredicted RBP20.83■□□□□ 0.93
MKS1-202ENST00000393119 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.92
MKS1-202ENST00000393119 CFAP70Q5T0N1 1121 aa20.82■□□□□ 0.92
MKS1-202ENST00000393119 CNTLNQ9NXG0 1405 aa20.8■□□□□ 0.92
MKS1-202ENST00000393119 IDI1Q13907 227 aa20.79■□□□□ 0.92
MKS1-202ENST00000393119 MROH2AA6NES4 1674 aa20.79■□□□□ 0.92
MKS1-202ENST00000393119 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
MKS1-202ENST00000393119 CAMSAP1Q5T5Y3 1602 aa20.78■□□□□ 0.92
MKS1-202ENST00000393119 GPRASP1Q5JY77 1395 aa20.77■□□□□ 0.92
MKS1-202ENST00000393119 MADDQ8WXG6 1647 aa20.77■□□□□ 0.91
MKS1-202ENST00000393119 TESK2Q96S53 571 aa20.76■□□□□ 0.91
MKS1-202ENST00000393119 NOS1P29475 1434 aa20.76■□□□□ 0.91
MKS1-202ENST00000393119 SYNMO15061 1565 aa20.74■□□□□ 0.91
MKS1-202ENST00000393119 DISP3Q9P2K9 1392 aa20.73■□□□□ 0.91
MKS1-202ENST00000393119 ARID4BQ4LE39 1312 aaPredicted RBP20.73■□□□□ 0.91
MKS1-202ENST00000393119 TMEM132EQ6IEE7 984 aa20.71■□□□□ 0.91
MKS1-202ENST00000393119 PRKRIP1Q9H875 184 aaPredicted RBP20.7■□□□□ 0.9
MKS1-202ENST00000393119 ADGRB3O60242 1522 aa20.7■□□□□ 0.9
MKS1-202ENST00000393119 KIF1BO60333 1816 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms