RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 FER1L4A9Z1Z3 1794 aa20.28■□□□□ 0.84
PTN-202ENST00000393083 RIMS1Q86UR5 1692 aaKnown RBP20.28■□□□□ 0.84
PTN-202ENST00000393083 EIF2AK4Q9P2K8 1649 aaKnown RBP20.27■□□□□ 0.84
PTN-202ENST00000393083 HRCP23327 699 aa20.27■□□□□ 0.84
PTN-202ENST00000393083 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
PTN-202ENST00000393083 RNF17Q9BXT8 1623 aaKnown RBP20.25■□□□□ 0.83
PTN-202ENST00000393083 FOXD1Q16676 465 aa20.24■□□□□ 0.83
PTN-202ENST00000393083 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
PTN-202ENST00000393083 ANKRD50Q9ULJ7 1429 aa20.23■□□□□ 0.83
PTN-202ENST00000393083 ESF1Q9H501 851 aaKnown RBP20.22■□□□□ 0.83
PTN-202ENST00000393083 MROH1Q8NDA8 1641 aa20.22■□□□□ 0.83
PTN-202ENST00000393083 CEBPAP49715 358 aaPredicted RBP20.19■□□□□ 0.82
PTN-202ENST00000393083 FAM135AQ9P2D6 1515 aa20.19■□□□□ 0.82
PTN-202ENST00000393083 GCC2Q8IWJ2 1684 aa20.19■□□□□ 0.82
PTN-202ENST00000393083 ZMYM3Q14202 1370 aa20.19■□□□□ 0.82
PTN-202ENST00000393083 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
PTN-202ENST00000393083 CLTCQ00610 1675 aaKnown RBP20.18■□□□□ 0.82
PTN-202ENST00000393083 DEPDC5O75140 1603 aa20.18■□□□□ 0.82
PTN-202ENST00000393083 KDM5DQ9BY66 1539 aa20.18■□□□□ 0.82
PTN-202ENST00000393083 WASHC2CQ9Y4E1 1318 aa20.18■□□□□ 0.82
PTN-202ENST00000393083 MROH2AA6NES4 1674 aa20.17■□□□□ 0.82
PTN-202ENST00000393083 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
PTN-202ENST00000393083 NAIPQ13075 1403 aa20.16■□□□□ 0.82
PTN-202ENST00000393083 SETD5Q9C0A6 1442 aa20.16■□□□□ 0.82
PTN-202ENST00000393083 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
PTN-202ENST00000393083 C3P01024 1663 aa20.15■□□□□ 0.82
PTN-202ENST00000393083 ABCC3O15438 1527 aa20.15■□□□□ 0.82
PTN-202ENST00000393083 HFM1A2PYH4 1435 aa20.14■□□□□ 0.82
PTN-202ENST00000393083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
PTN-202ENST00000393083 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
PTN-202ENST00000393083 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
PTN-202ENST00000393083 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
PTN-202ENST00000393083 KANK1Q14678 1352 aa20.1■□□□□ 0.81
PTN-202ENST00000393083 UNC13BO14795 1591 aa20.09■□□□□ 0.81
PTN-202ENST00000393083 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
PTN-202ENST00000393083 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.81
PTN-202ENST00000393083 CEP152O94986 1710 aa20.08■□□□□ 0.81
PTN-202ENST00000393083 NPATQ14207 1427 aa20.08■□□□□ 0.8
PTN-202ENST00000393083 PZPP20742 1482 aa20.08■□□□□ 0.8
PTN-202ENST00000393083 FBXO31Q5XUX0 539 aaPredicted RBP20.06■□□□□ 0.8
PTN-202ENST00000393083 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
PTN-202ENST00000393083 DHX57Q6P158 1386 aaKnown RBP20.05■□□□□ 0.8
PTN-202ENST00000393083 ARHGAP31Q2M1Z3 1444 aa20.05■□□□□ 0.8
PTN-202ENST00000393083 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
PTN-202ENST00000393083 NUP155O75694 1391 aa20.03■□□□□ 0.8
PTN-202ENST00000393083 LMTK3Q96Q04 1460 aa20.02■□□□□ 0.8
PTN-202ENST00000393083 IQGAP3Q86VI3 1631 aa20.01■□□□□ 0.79
PTN-202ENST00000393083 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
PTN-202ENST00000393083 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
PTN-202ENST00000393083 SPATA31D1Q6ZQQ2 1576 aa19.99■□□□□ 0.79
PTN-202ENST00000393083 ERVK-7P63135 1459 aa19.99■□□□□ 0.79
PTN-202ENST00000393083 UHRF1BP1Q6BDS2 1440 aa19.98■□□□□ 0.79
PTN-202ENST00000393083 TNRQ92752 1358 aa19.98■□□□□ 0.79
PTN-202ENST00000393083 TET3O43151 1660 aa19.98■□□□□ 0.79
PTN-202ENST00000393083 RPRD2Q5VT52 1461 aaKnown RBP19.95■□□□□ 0.78
PTN-202ENST00000393083 MYO3AQ8NEV4 1616 aa19.94■□□□□ 0.78
PTN-202ENST00000393083 NOS1P29475 1434 aa19.93■□□□□ 0.78
PTN-202ENST00000393083 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
PTN-202ENST00000393083 HSPA2P54652 639 aa19.92■□□□□ 0.78
PTN-202ENST00000393083 CFAP65Q6ZU64 1925 aaKnown RBP19.92■□□□□ 0.78
PTN-202ENST00000393083 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
PTN-202ENST00000393083 E9PCH4 1651 aa19.91■□□□□ 0.78
PTN-202ENST00000393083 NLRP1Q9C000 1473 aa19.91■□□□□ 0.78
PTN-202ENST00000393083 CEP170BQ9Y4F5 1589 aaPredicted RBP19.9■□□□□ 0.78
PTN-202ENST00000393083 A2ML1A8K2U0 1454 aa19.9■□□□□ 0.78
PTN-202ENST00000393083 ZNF142P52746 1687 aaPredicted RBP19.9■□□□□ 0.78
PTN-202ENST00000393083 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
PTN-202ENST00000393083 SYNMO15061 1565 aa19.88■□□□□ 0.77
PTN-202ENST00000393083 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
PTN-202ENST00000393083 PKD2Q13563 968 aa19.85■□□□□ 0.77
PTN-202ENST00000393083 IDI1Q13907 227 aa19.85■□□□□ 0.77
PTN-202ENST00000393083 MPHOSPH9Q99550 1183 aa19.84■□□□□ 0.77
PTN-202ENST00000393083 PTPRTO14522 1441 aa19.84■□□□□ 0.77
PTN-202ENST00000393083 SLC52A1Q9NWF4 448 aa19.83■□□□□ 0.77
PTN-202ENST00000393083 UGGT1Q9NYU2 1555 aa19.82■□□□□ 0.76
PTN-202ENST00000393083 THEMISQ8N1K5 641 aaPredicted RBP19.8■□□□□ 0.76
PTN-202ENST00000393083 PLA2R1Q13018 1463 aa19.8■□□□□ 0.76
PTN-202ENST00000393083 PIK3C2BO00750 1634 aa19.79■□□□□ 0.76
PTN-202ENST00000393083 UBR1Q8IWV7 1749 aa19.78■□□□□ 0.76
PTN-202ENST00000393083 SPHKAPQ2M3C7 1700 aa19.78■□□□□ 0.76
PTN-202ENST00000393083 STRCQ7RTU9 1775 aa19.77■□□□□ 0.76
PTN-202ENST00000393083 TRPM2O94759 1503 aa19.76■□□□□ 0.75
PTN-202ENST00000393083 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
PTN-202ENST00000393083 KDM5AP29375 1690 aaKnown RBP19.75■□□□□ 0.75
PTN-202ENST00000393083 ADGRB3O60242 1522 aa19.74■□□□□ 0.75
PTN-202ENST00000393083 NCKAP5LQ9HCH0 1330 aa19.73■□□□□ 0.75
PTN-202ENST00000393083 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
PTN-202ENST00000393083 ARHGAP23Q9P227 1491 aa19.73■□□□□ 0.75
PTN-202ENST00000393083 SLIT1O75093 1534 aa19.72■□□□□ 0.75
PTN-202ENST00000393083 TMEM131LA2VDJ0 1609 aa19.72■□□□□ 0.75
PTN-202ENST00000393083 CLTCL1P53675 1640 aa19.71■□□□□ 0.75
PTN-202ENST00000393083 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
PTN-202ENST00000393083 ANKLE2Q86XL3 938 aa19.7■□□□□ 0.74
PTN-202ENST00000393083 LTKP29376 864 aa19.68■□□□□ 0.74
PTN-202ENST00000393083 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
PTN-202ENST00000393083 NEURL4Q96JN8 1562 aa19.67■□□□□ 0.74
PTN-202ENST00000393083 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
PTN-202ENST00000393083 MYO5BQ9ULV0 1848 aa19.66■□□□□ 0.74
PTN-202ENST00000393083 MED14O60244 1454 aa19.66■□□□□ 0.74
PTN-202ENST00000393083 TXNDC2Q86VQ3 553 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms