RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 ARHGEF5Q12774 1597 aa17.1■□□□□ 0.33
TRAF3IP2-208ENST00000392556 PLA2R1Q13018 1463 aa17.09■□□□□ 0.33
TRAF3IP2-208ENST00000392556 IQSEC2Q5JU85 1478 aa17.09■□□□□ 0.33
TRAF3IP2-208ENST00000392556 CLTCQ00610 1675 aaKnown RBP17.09■□□□□ 0.33
TRAF3IP2-208ENST00000392556 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
TRAF3IP2-208ENST00000392556 PKD2Q13563 968 aa17.08■□□□□ 0.32
TRAF3IP2-208ENST00000392556 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
TRAF3IP2-208ENST00000392556 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
TRAF3IP2-208ENST00000392556 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
TRAF3IP2-208ENST00000392556 CAMSAP1Q5T5Y3 1602 aa17.05■□□□□ 0.32
TRAF3IP2-208ENST00000392556 MIA2Q96PC5 1412 aa17.05■□□□□ 0.32
TRAF3IP2-208ENST00000392556 MYO3AQ8NEV4 1616 aa17.04■□□□□ 0.32
TRAF3IP2-208ENST00000392556 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
TRAF3IP2-208ENST00000392556 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
TRAF3IP2-208ENST00000392556 A2ML1A8K2U0 1454 aa17.02■□□□□ 0.32
TRAF3IP2-208ENST00000392556 KIF3BO15066 747 aa17.02■□□□□ 0.31
TRAF3IP2-208ENST00000392556 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.31
TRAF3IP2-208ENST00000392556 PZPP20742 1482 aa17.01■□□□□ 0.31
TRAF3IP2-208ENST00000392556 TCOF1Q13428 1488 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP2-208ENST00000392556 PRKCSHP14314 528 aaPredicted RBP17.01■□□□□ 0.31
TRAF3IP2-208ENST00000392556 LTBP4Q8N2S1 1624 aa17■□□□□ 0.31
TRAF3IP2-208ENST00000392556 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
TRAF3IP2-208ENST00000392556 WASHC2CQ9Y4E1 1318 aa16.98■□□□□ 0.31
TRAF3IP2-208ENST00000392556 TNRQ92752 1358 aa16.98■□□□□ 0.31
TRAF3IP2-208ENST00000392556 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
TRAF3IP2-208ENST00000392556 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
TRAF3IP2-208ENST00000392556 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.3
TRAF3IP2-208ENST00000392556 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
TRAF3IP2-208ENST00000392556 APLP2Q06481 763 aa16.95■□□□□ 0.3
TRAF3IP2-208ENST00000392556 RNF17Q9BXT8 1623 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP2-208ENST00000392556 DNMT1P26358 1616 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP2-208ENST00000392556 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP2-208ENST00000392556 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
TRAF3IP2-208ENST00000392556 SHANK2Q9UPX8 1470 aa16.92■□□□□ 0.3
TRAF3IP2-208ENST00000392556 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
TRAF3IP2-208ENST00000392556 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
TRAF3IP2-208ENST00000392556 ABCC3O15438 1527 aa16.89■□□□□ 0.29
TRAF3IP2-208ENST00000392556 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ANKLE2Q86XL3 938 aa16.89■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
TRAF3IP2-208ENST00000392556 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
TRAF3IP2-208ENST00000392556 CPS1P31327 1500 aa16.86■□□□□ 0.29
TRAF3IP2-208ENST00000392556 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
TRAF3IP2-208ENST00000392556 POLR1AO95602 1720 aaPredicted RBP16.85■□□□□ 0.29
TRAF3IP2-208ENST00000392556 MED14O60244 1454 aa16.85■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ERICH6Q7L0X2 663 aa16.85■□□□□ 0.29
TRAF3IP2-208ENST00000392556 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ARHGAP31Q2M1Z3 1444 aa16.84■□□□□ 0.29
TRAF3IP2-208ENST00000392556 KIF15Q9NS87 1388 aa16.83■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ERVK-7P63135 1459 aa16.83■□□□□ 0.29
TRAF3IP2-208ENST00000392556 ABCC5O15440 1437 aa16.83■□□□□ 0.28
TRAF3IP2-208ENST00000392556 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.28
TRAF3IP2-208ENST00000392556 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
TRAF3IP2-208ENST00000392556 MROH1Q8NDA8 1641 aa16.82■□□□□ 0.28
TRAF3IP2-208ENST00000392556 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
TRAF3IP2-208ENST00000392556 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
TRAF3IP2-208ENST00000392556 CROCC2H7BZ55 1655 aa16.81■□□□□ 0.28
TRAF3IP2-208ENST00000392556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAF3IP2-208ENST00000392556 DAPK1P53355 1430 aa16.81■□□□□ 0.28
TRAF3IP2-208ENST00000392556 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
TRAF3IP2-208ENST00000392556 KANK1Q14678 1352 aa16.8■□□□□ 0.28
TRAF3IP2-208ENST00000392556 UBAP1LF5GYI3 381 aa16.8■□□□□ 0.28
TRAF3IP2-208ENST00000392556 ANKRD30AQ9BXX3 1397 aa16.8■□□□□ 0.28
TRAF3IP2-208ENST00000392556 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
TRAF3IP2-208ENST00000392556 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.28
TRAF3IP2-208ENST00000392556 TOM1O60784 492 aa16.77■□□□□ 0.27
TRAF3IP2-208ENST00000392556 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
TRAF3IP2-208ENST00000392556 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
TRAF3IP2-208ENST00000392556 VWDEQ8N2E2 1590 aa16.75■□□□□ 0.27
TRAF3IP2-208ENST00000392556 CEP152O94986 1710 aa16.74■□□□□ 0.27
TRAF3IP2-208ENST00000392556 IQGAP1P46940 1657 aa16.74■□□□□ 0.27
TRAF3IP2-208ENST00000392556 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
TRAF3IP2-208ENST00000392556 SLIT1O75093 1534 aa16.73■□□□□ 0.27
TRAF3IP2-208ENST00000392556 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
TRAF3IP2-208ENST00000392556 SCAF11Q99590 1463 aaKnown RBP16.72■□□□□ 0.27
TRAF3IP2-208ENST00000392556 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
TRAF3IP2-208ENST00000392556 EID1Q9Y6B2 187 aa16.71■□□□□ 0.27
TRAF3IP2-208ENST00000392556 KDM5AP29375 1690 aaKnown RBP16.7■□□□□ 0.26
TRAF3IP2-208ENST00000392556 SYNMO15061 1565 aa16.69■□□□□ 0.26
TRAF3IP2-208ENST00000392556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAF3IP2-208ENST00000392556 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
TRAF3IP2-208ENST00000392556 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
TRAF3IP2-208ENST00000392556 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
TRAF3IP2-208ENST00000392556 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
TRAF3IP2-208ENST00000392556 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
TRAF3IP2-208ENST00000392556 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
TRAF3IP2-208ENST00000392556 EFCAB6Q5THR3 1501 aa16.64■□□□□ 0.25
TRAF3IP2-208ENST00000392556 NOS1P29475 1434 aa16.64■□□□□ 0.25
TRAF3IP2-208ENST00000392556 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
TRAF3IP2-208ENST00000392556 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
TRAF3IP2-208ENST00000392556 SOCS7O14512 581 aa16.63■□□□□ 0.25
TRAF3IP2-208ENST00000392556 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
TRAF3IP2-208ENST00000392556 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
TRAF3IP2-208ENST00000392556 PIK3C2BO00750 1634 aa16.62■□□□□ 0.25
TRAF3IP2-208ENST00000392556 LTKP29376 864 aa16.62■□□□□ 0.25
TRAF3IP2-208ENST00000392556 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
TRAF3IP2-208ENST00000392556 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
TRAF3IP2-208ENST00000392556 IDI1Q13907 227 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms