RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 MAGI2Q86UL8 1455 aa17.43■□□□□ 0.38
VIL1-202ENST00000392114 KANK1Q14678 1352 aa17.42■□□□□ 0.38
VIL1-202ENST00000392114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.384e-9■□□□□ 10.8
VIL1-202ENST00000392114 A2MP01023 1474 aa17.41■□□□□ 0.38
VIL1-202ENST00000392114 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
VIL1-202ENST00000392114 RAPGEF3O95398 923 aa17.4■□□□□ 0.38
VIL1-202ENST00000392114 DEPDC5O75140 1603 aa17.39■□□□□ 0.38
VIL1-202ENST00000392114 KIF3BO15066 747 aa17.38■□□□□ 0.37
VIL1-202ENST00000392114 FOXD1Q16676 465 aa17.38■□□□□ 0.37
VIL1-202ENST00000392114 RPRD2Q5VT52 1461 aaKnown RBP17.38■□□□□ 0.37
VIL1-202ENST00000392114 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
VIL1-202ENST00000392114 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
VIL1-202ENST00000392114 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
VIL1-202ENST00000392114 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
VIL1-202ENST00000392114 PRDM15P57071 1507 aaPredicted RBP17.33■□□□□ 0.36
VIL1-202ENST00000392114 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
VIL1-202ENST00000392114 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
VIL1-202ENST00000392114 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
VIL1-202ENST00000392114 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
VIL1-202ENST00000392114 TET3O43151 1660 aa17.31■□□□□ 0.36
VIL1-202ENST00000392114 VWDEQ8N2E2 1590 aa17.31■□□□□ 0.36
VIL1-202ENST00000392114 ATP10AO60312 1499 aa17.29■□□□□ 0.36
VIL1-202ENST00000392114 CCDC144AA2RUR9 1427 aa17.28■□□□□ 0.36
VIL1-202ENST00000392114 REREQ9P2R6 1566 aa17.27■□□□□ 0.35
VIL1-202ENST00000392114 LMTK2Q8IWU2 1503 aa17.27■□□□□ 0.35
VIL1-202ENST00000392114 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
VIL1-202ENST00000392114 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
VIL1-202ENST00000392114 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
VIL1-202ENST00000392114 YEATS2Q9ULM3 1422 aa17.25■□□□□ 0.35
VIL1-202ENST00000392114 E9PCH4 1651 aa17.25■□□□□ 0.35
VIL1-202ENST00000392114 GGT6Q6P531 493 aa17.25■□□□□ 0.35
VIL1-202ENST00000392114 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
VIL1-202ENST00000392114 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
VIL1-202ENST00000392114 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
VIL1-202ENST00000392114 AGLP35573 1532 aa17.22■□□□□ 0.35
VIL1-202ENST00000392114 ZC3H13Q5T200 1668 aaKnown RBP17.21■□□□□ 0.35
VIL1-202ENST00000392114 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
VIL1-202ENST00000392114 CEP152O94986 1710 aa17.2■□□□□ 0.34
VIL1-202ENST00000392114 PTPRTO14522 1441 aa17.2■□□□□ 0.34
VIL1-202ENST00000392114 TRPM2O94759 1503 aa17.2■□□□□ 0.34
VIL1-202ENST00000392114 PLA2R1Q13018 1463 aa17.19■□□□□ 0.34
VIL1-202ENST00000392114 COL17A1Q9UMD9 1497 aaPredicted RBP17.19■□□□□ 0.34
VIL1-202ENST00000392114 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
VIL1-202ENST00000392114 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
VIL1-202ENST00000392114 ABCC3O15438 1527 aa17.16■□□□□ 0.34
VIL1-202ENST00000392114 CAMSAP1Q5T5Y3 1602 aa17.15■□□□□ 0.34
VIL1-202ENST00000392114 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
VIL1-202ENST00000392114 DCAF11Q8TEB1 546 aa17.13■□□□□ 0.33
VIL1-202ENST00000392114 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
VIL1-202ENST00000392114 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
VIL1-202ENST00000392114 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
VIL1-202ENST00000392114 KIF1BO60333 1816 aa17.12■□□□□ 0.33
VIL1-202ENST00000392114 NPATQ14207 1427 aa17.11■□□□□ 0.33
VIL1-202ENST00000392114 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
VIL1-202ENST00000392114 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
VIL1-202ENST00000392114 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
VIL1-202ENST00000392114 CLTCL1P53675 1640 aa17.09■□□□□ 0.33
VIL1-202ENST00000392114 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
VIL1-202ENST00000392114 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
VIL1-202ENST00000392114 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.32
VIL1-202ENST00000392114 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
VIL1-202ENST00000392114 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
VIL1-202ENST00000392114 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
VIL1-202ENST00000392114 NOS1P29475 1434 aa17.05■□□□□ 0.32
VIL1-202ENST00000392114 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
VIL1-202ENST00000392114 SLC52A1Q9NWF4 448 aa17.04■□□□□ 0.32
VIL1-202ENST00000392114 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
VIL1-202ENST00000392114 CLTCQ00610 1675 aaKnown RBP17.02■□□□□ 0.31
VIL1-202ENST00000392114 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.31
VIL1-202ENST00000392114 PREX1Q8TCU6 1659 aa17.01■□□□□ 0.31
VIL1-202ENST00000392114 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
VIL1-202ENST00000392114 MLECQ14165 292 aa17■□□□□ 0.31
VIL1-202ENST00000392114 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
VIL1-202ENST00000392114 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
VIL1-202ENST00000392114 HSPA5P11021 654 aaKnown RBP16.99■□□□□ 0.31
VIL1-202ENST00000392114 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
VIL1-202ENST00000392114 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
VIL1-202ENST00000392114 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
VIL1-202ENST00000392114 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
VIL1-202ENST00000392114 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
VIL1-202ENST00000392114 ADGRB3O60242 1522 aa16.97■□□□□ 0.31
VIL1-202ENST00000392114 SYNMO15061 1565 aa16.96■□□□□ 0.31
VIL1-202ENST00000392114 MYOM2P54296 1465 aa16.96■□□□□ 0.31
VIL1-202ENST00000392114 LAMC1P11047 1609 aa16.95■□□□□ 0.3
VIL1-202ENST00000392114 ERVK-7P63135 1459 aa16.95■□□□□ 0.3
VIL1-202ENST00000392114 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
VIL1-202ENST00000392114 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
VIL1-202ENST00000392114 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
VIL1-202ENST00000392114 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
VIL1-202ENST00000392114 USP47Q96K76 1375 aa16.93■□□□□ 0.3
VIL1-202ENST00000392114 HIRIP3Q9BW71 556 aaPredicted RBP16.93■□□□□ 0.3
VIL1-202ENST00000392114 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
VIL1-202ENST00000392114 SPATA31D1Q6ZQQ2 1576 aa16.93■□□□□ 0.3
VIL1-202ENST00000392114 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
VIL1-202ENST00000392114 IDI1Q13907 227 aa16.93■□□□□ 0.3
VIL1-202ENST00000392114 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
VIL1-202ENST00000392114 PPLO60437 1756 aa16.91■□□□□ 0.3
VIL1-202ENST00000392114 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
VIL1-202ENST00000392114 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
VIL1-202ENST00000392114 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms