RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 ALKQ9UM73 1620 aa23.53■■□□□ 1.36
RPL13A-201ENST00000391857 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
RPL13A-201ENST00000391857 THEMISQ8N1K5 641 aaPredicted RBP23.52■■□□□ 1.36
RPL13A-201ENST00000391857 ZNF644Q9H582 1327 aaPredicted RBP23.52■■□□□ 1.36
RPL13A-201ENST00000391857 VWDEQ8N2E2 1590 aa23.51■■□□□ 1.35
RPL13A-201ENST00000391857 DHX29Q7Z478 1369 aaKnown RBP23.51■■□□□ 1.35
RPL13A-201ENST00000391857 FYCO1Q9BQS8 1478 aa23.5■■□□□ 1.35
RPL13A-201ENST00000391857 KIF3BO15066 747 aa23.47■■□□□ 1.35
RPL13A-201ENST00000391857 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
RPL13A-201ENST00000391857 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
RPL13A-201ENST00000391857 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
RPL13A-201ENST00000391857 NPHP4O75161 1426 aaPredicted RBP23.47■■□□□ 1.35
RPL13A-201ENST00000391857 MED14O60244 1454 aa23.47■■□□□ 1.35
RPL13A-201ENST00000391857 MBD5Q9P267 1494 aa23.47■■□□□ 1.35
RPL13A-201ENST00000391857 PZPP20742 1482 aa23.46■■□□□ 1.35
RPL13A-201ENST00000391857 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
RPL13A-201ENST00000391857 POLR1AO95602 1720 aaPredicted RBP23.45■■□□□ 1.34
RPL13A-201ENST00000391857 ADGBQ8N7X0 1667 aa23.44■■□□□ 1.34
RPL13A-201ENST00000391857 WASHC2CQ9Y4E1 1318 aa23.43■■□□□ 1.34
RPL13A-201ENST00000391857 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
RPL13A-201ENST00000391857 NLRP1Q9C000 1473 aa23.4■■□□□ 1.34
RPL13A-201ENST00000391857 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
RPL13A-201ENST00000391857 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
RPL13A-201ENST00000391857 UGGT1Q9NYU2 1555 aa23.38■■□□□ 1.33
RPL13A-201ENST00000391857 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
RPL13A-201ENST00000391857 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
RPL13A-201ENST00000391857 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
RPL13A-201ENST00000391857 RSPH4AQ5TD94 716 aa23.3■■□□□ 1.32
RPL13A-201ENST00000391857 TIAM1Q13009 1591 aa23.3■■□□□ 1.32
RPL13A-201ENST00000391857 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
RPL13A-201ENST00000391857 POTEAQ6S8J7 498 aa23.28■■□□□ 1.32
RPL13A-201ENST00000391857 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
RPL13A-201ENST00000391857 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
RPL13A-201ENST00000391857 CCDC141Q6ZP82 1450 aa23.26■■□□□ 1.31
RPL13A-201ENST00000391857 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
RPL13A-201ENST00000391857 SYNMO15061 1565 aa23.23■■□□□ 1.31
RPL13A-201ENST00000391857 LTKP29376 864 aa23.22■■□□□ 1.31
RPL13A-201ENST00000391857 FAM135BQ49AJ0 1406 aa23.21■■□□□ 1.31
RPL13A-201ENST00000391857 TSPY4P0CV99 314 aa23.19■■□□□ 1.3
RPL13A-201ENST00000391857 TSPY10P0CW01 314 aa23.19■■□□□ 1.3
RPL13A-201ENST00000391857 TXNDC2Q86VQ3 553 aa23.19■■□□□ 1.3
RPL13A-201ENST00000391857 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
RPL13A-201ENST00000391857 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
RPL13A-201ENST00000391857 CAMSAP2Q08AD1 1489 aa23.17■■□□□ 1.3
RPL13A-201ENST00000391857 ABCC3O15438 1527 aa23.17■■□□□ 1.3
RPL13A-201ENST00000391857 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
RPL13A-201ENST00000391857 NCOA2Q15596 1464 aa23.16■■□□□ 1.3
RPL13A-201ENST00000391857 ZC3H13Q5T200 1668 aaKnown RBP23.16■■□□□ 1.3
RPL13A-201ENST00000391857 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
RPL13A-201ENST00000391857 SLIT1O75093 1534 aa23.09■■□□□ 1.29
RPL13A-201ENST00000391857 EID1Q9Y6B2 187 aa23.09■■□□□ 1.29
RPL13A-201ENST00000391857 TMEM94Q12767 1356 aa23.09■■□□□ 1.29
RPL13A-201ENST00000391857 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
RPL13A-201ENST00000391857 UBR1Q8IWV7 1749 aa23.07■■□□□ 1.28
RPL13A-201ENST00000391857 XIRP1Q702N8 1843 aaKnown RBP23.06■■□□□ 1.28
RPL13A-201ENST00000391857 KCNA6P17658 529 aa23.06■■□□□ 1.28
RPL13A-201ENST00000391857 RBM33Q96EV2 1170 aaKnown RBP23.03■■□□□ 1.28
RPL13A-201ENST00000391857 TMEM2Q9UHN6 1383 aa23.02■■□□□ 1.28
RPL13A-201ENST00000391857 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.28
RPL13A-201ENST00000391857 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
RPL13A-201ENST00000391857 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
RPL13A-201ENST00000391857 MAST1Q9Y2H9 1570 aa22.98■■□□□ 1.27
RPL13A-201ENST00000391857 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
RPL13A-201ENST00000391857 MAP3K1Q13233 1512 aa22.97■■□□□ 1.27
RPL13A-201ENST00000391857 EIF2AK4Q9P2K8 1649 aaKnown RBP22.97■■□□□ 1.27
RPL13A-201ENST00000391857 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
RPL13A-201ENST00000391857 UPF1Q92900 1129 aaKnown RBP eCLIP22.96■■□□□ 1.274e-13■□□□□ 9.4
RPL13A-201ENST00000391857 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
RPL13A-201ENST00000391857 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
RPL13A-201ENST00000391857 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
RPL13A-201ENST00000391857 JCADQ9P266 1359 aa22.95■■□□□ 1.26
RPL13A-201ENST00000391857 IDI1Q13907 227 aa22.94■■□□□ 1.26
RPL13A-201ENST00000391857 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
RPL13A-201ENST00000391857 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
RPL13A-201ENST00000391857 CEP152O94986 1710 aa22.92■■□□□ 1.26
RPL13A-201ENST00000391857 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
RPL13A-201ENST00000391857 TET3O43151 1660 aa22.9■■□□□ 1.26
RPL13A-201ENST00000391857 DUOX2Q9NRD8 1548 aa22.9■■□□□ 1.26
RPL13A-201ENST00000391857 MSH6P52701 1360 aa22.89■■□□□ 1.26
RPL13A-201ENST00000391857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.252e-18■□□□□ 8.9
RPL13A-201ENST00000391857 PIK3C2BO00750 1634 aa22.89■■□□□ 1.25
RPL13A-201ENST00000391857 EFCAB6Q5THR3 1501 aa22.87■■□□□ 1.25
RPL13A-201ENST00000391857 NKTRP30414 1462 aaKnown RBP22.86■■□□□ 1.25
RPL13A-201ENST00000391857 ZNF772Q68DY9 489 aaPredicted RBP22.86■■□□□ 1.25
RPL13A-201ENST00000391857 TRIM52Q96A61 297 aa22.85■■□□□ 1.25
RPL13A-201ENST00000391857 RRP7BPQ9NSQ0 103 aa22.85■■□□□ 1.25
RPL13A-201ENST00000391857 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
RPL13A-201ENST00000391857 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
RPL13A-201ENST00000391857 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
RPL13A-201ENST00000391857 ERBINQ96RT1 1412 aa22.82■■□□□ 1.24
RPL13A-201ENST00000391857 LRP6O75581 1613 aa22.82■■□□□ 1.24
RPL13A-201ENST00000391857 NWD1Q149M9 1564 aa22.81■■□□□ 1.24
RPL13A-201ENST00000391857 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
RPL13A-201ENST00000391857 BCANQ96GW7 911 aa22.81■■□□□ 1.24
RPL13A-201ENST00000391857 PHLPP1O60346 1717 aa22.81■■□□□ 1.24
RPL13A-201ENST00000391857 KANK1Q14678 1352 aa22.8■■□□□ 1.24
RPL13A-201ENST00000391857 KANK4Q5T7N3 995 aaPredicted RBP22.8■■□□□ 1.24
RPL13A-201ENST00000391857 FGD6Q6ZV73 1430 aa22.8■■□□□ 1.24
RPL13A-201ENST00000391857 RXRBP28702 533 aa22.78■■□□□ 1.24
RPL13A-201ENST00000391857 KDM5AP29375 1690 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms