RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 PZPP20742 1482 aa11□□□□□ -0.65
RNU1-56P-201ENST00000391303 KDM5DQ9BY66 1539 aa11□□□□□ -0.65
RNU1-56P-201ENST00000391303 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
RNU1-56P-201ENST00000391303 TNRQ92752 1358 aa10.99□□□□□ -0.65
RNU1-56P-201ENST00000391303 A2ML1A8K2U0 1454 aa10.98□□□□□ -0.65
RNU1-56P-201ENST00000391303 TCOF1Q13428 1488 aaKnown RBP10.98□□□□□ -0.65
RNU1-56P-201ENST00000391303 IQSEC2Q5JU85 1478 aa10.98□□□□□ -0.65
RNU1-56P-201ENST00000391303 THEMISQ8N1K5 641 aaPredicted RBP10.97□□□□□ -0.65
RNU1-56P-201ENST00000391303 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
RNU1-56P-201ENST00000391303 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
RNU1-56P-201ENST00000391303 ABCC5O15440 1437 aa10.96□□□□□ -0.65
RNU1-56P-201ENST00000391303 FGD6Q6ZV73 1430 aa10.96□□□□□ -0.65
RNU1-56P-201ENST00000391303 ERBINQ96RT1 1412 aa10.96□□□□□ -0.65
RNU1-56P-201ENST00000391303 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
RNU1-56P-201ENST00000391303 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
RNU1-56P-201ENST00000391303 KIF15Q9NS87 1388 aa10.95□□□□□ -0.66
RNU1-56P-201ENST00000391303 ARHGAP31Q2M1Z3 1444 aa10.94□□□□□ -0.66
RNU1-56P-201ENST00000391303 ANKRD30AQ9BXX3 1397 aa10.94□□□□□ -0.66
RNU1-56P-201ENST00000391303 FBXO31Q5XUX0 539 aaPredicted RBP10.94□□□□□ -0.66
RNU1-56P-201ENST00000391303 DAPK1P53355 1430 aa10.93□□□□□ -0.66
RNU1-56P-201ENST00000391303 NCKAP5LQ9HCH0 1330 aa10.93□□□□□ -0.66
RNU1-56P-201ENST00000391303 CLTCQ00610 1675 aaKnown RBP10.93□□□□□ -0.66
RNU1-56P-201ENST00000391303 ANKLE2Q86XL3 938 aa10.93□□□□□ -0.66
RNU1-56P-201ENST00000391303 EIF2AK4Q9P2K8 1649 aaKnown RBP10.93□□□□□ -0.66
RNU1-56P-201ENST00000391303 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
RNU1-56P-201ENST00000391303 ZNF142P52746 1687 aaPredicted RBP10.92□□□□□ -0.66
RNU1-56P-201ENST00000391303 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
RNU1-56P-201ENST00000391303 RNF17Q9BXT8 1623 aaKnown RBP10.92□□□□□ -0.66
RNU1-56P-201ENST00000391303 ABCC3O15438 1527 aa10.92□□□□□ -0.66
RNU1-56P-201ENST00000391303 KANK1Q14678 1352 aa10.91□□□□□ -0.66
RNU1-56P-201ENST00000391303 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
RNU1-56P-201ENST00000391303 LTBP4Q8N2S1 1624 aa10.91□□□□□ -0.66
RNU1-56P-201ENST00000391303 ADGRL2O95490 1459 aa10.89□□□□□ -0.67
RNU1-56P-201ENST00000391303 ERVK-7P63135 1459 aa10.89□□□□□ -0.67
RNU1-56P-201ENST00000391303 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
RNU1-56P-201ENST00000391303 SPATA31D1Q6ZQQ2 1576 aa10.89□□□□□ -0.67
RNU1-56P-201ENST00000391303 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
RNU1-56P-201ENST00000391303 MED14O60244 1454 aa10.88□□□□□ -0.67
RNU1-56P-201ENST00000391303 DNMT1P26358 1616 aaKnown RBP10.88□□□□□ -0.67
RNU1-56P-201ENST00000391303 PRDM15P57071 1507 aaPredicted RBP10.88□□□□□ -0.67
RNU1-56P-201ENST00000391303 ZNF335Q9H4Z2 1342 aaPredicted RBP10.87□□□□□ -0.67
RNU1-56P-201ENST00000391303 UGGT1Q9NYU2 1555 aa10.87□□□□□ -0.67
RNU1-56P-201ENST00000391303 LMTK2Q8IWU2 1503 aa10.87□□□□□ -0.67
RNU1-56P-201ENST00000391303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.87□□□□□ -0.67
RNU1-56P-201ENST00000391303 MROH1Q8NDA8 1641 aa10.86□□□□□ -0.67
RNU1-56P-201ENST00000391303 NPHP4O75161 1426 aaPredicted RBP10.85□□□□□ -0.67
RNU1-56P-201ENST00000391303 FAM50AQ14320 339 aaKnown RBP10.85□□□□□ -0.67
RNU1-56P-201ENST00000391303 SLC52A1Q9NWF4 448 aa10.85□□□□□ -0.67
RNU1-56P-201ENST00000391303 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
RNU1-56P-201ENST00000391303 ANKRD50Q9ULJ7 1429 aa10.84□□□□□ -0.67
RNU1-56P-201ENST00000391303 CPS1P31327 1500 aa10.84□□□□□ -0.67
RNU1-56P-201ENST00000391303 CHIC2Q9UKJ5 165 aa10.84□□□□□ -0.67
RNU1-56P-201ENST00000391303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.68
RNU1-56P-201ENST00000391303 EID1Q9Y6B2 187 aa10.83□□□□□ -0.68
RNU1-56P-201ENST00000391303 DEPDC5O75140 1603 aa10.83□□□□□ -0.68
RNU1-56P-201ENST00000391303 RPRD2Q5VT52 1461 aaKnown RBP10.82□□□□□ -0.68
RNU1-56P-201ENST00000391303 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
RNU1-56P-201ENST00000391303 VWDEQ8N2E2 1590 aa10.82□□□□□ -0.68
RNU1-56P-201ENST00000391303 SLIT1O75093 1534 aa10.81□□□□□ -0.68
RNU1-56P-201ENST00000391303 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
RNU1-56P-201ENST00000391303 TOM1O60784 492 aa10.81□□□□□ -0.68
RNU1-56P-201ENST00000391303 NOS1P29475 1434 aa10.81□□□□□ -0.68
RNU1-56P-201ENST00000391303 NEURL4Q96JN8 1562 aa10.81□□□□□ -0.68
RNU1-56P-201ENST00000391303 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
RNU1-56P-201ENST00000391303 TMEM2Q9UHN6 1383 aa10.8□□□□□ -0.68
RNU1-56P-201ENST00000391303 CROCC2H7BZ55 1655 aa10.8□□□□□ -0.68
RNU1-56P-201ENST00000391303 TXNDC2Q86VQ3 553 aa10.8□□□□□ -0.68
RNU1-56P-201ENST00000391303 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
RNU1-56P-201ENST00000391303 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
RNU1-56P-201ENST00000391303 IDI1Q13907 227 aa10.79□□□□□ -0.68
RNU1-56P-201ENST00000391303 LTKP29376 864 aa10.77□□□□□ -0.69
RNU1-56P-201ENST00000391303 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.69
RNU1-56P-201ENST00000391303 KDM5AP29375 1690 aaKnown RBP10.74□□□□□ -0.69
RNU1-56P-201ENST00000391303 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.74□□□□□ -0.69
RNU1-56P-201ENST00000391303 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
RNU1-56P-201ENST00000391303 KCNA6P17658 529 aa10.72□□□□□ -0.69
RNU1-56P-201ENST00000391303 RRBP1Q9P2E9 1410 aaKnown RBP10.72□□□□□ -0.69
RNU1-56P-201ENST00000391303 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
RNU1-56P-201ENST00000391303 IQGAP1P46940 1657 aa10.72□□□□□ -0.69
RNU1-56P-201ENST00000391303 ADGRB3O60242 1522 aa10.71□□□□□ -0.69
RNU1-56P-201ENST00000391303 NUP155O75694 1391 aa10.71□□□□□ -0.69
RNU1-56P-201ENST00000391303 CEP152O94986 1710 aa10.71□□□□□ -0.69
RNU1-56P-201ENST00000391303 UBR1Q8IWV7 1749 aa10.71□□□□□ -0.69
RNU1-56P-201ENST00000391303 DISP3Q9P2K9 1392 aa10.71□□□□□ -0.69
RNU1-56P-201ENST00000391303 PLEKHG1Q9ULL1 1385 aa10.7□□□□□ -0.7
RNU1-56P-201ENST00000391303 UNC13BO14795 1591 aa10.69□□□□□ -0.7
RNU1-56P-201ENST00000391303 SYNMO15061 1565 aa10.69□□□□□ -0.7
RNU1-56P-201ENST00000391303 ZFYVE9O95405 1425 aa10.69□□□□□ -0.7
RNU1-56P-201ENST00000391303 TBX22Q9Y458 520 aa10.69□□□□□ -0.7
RNU1-56P-201ENST00000391303 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
RNU1-56P-201ENST00000391303 PIK3R4Q99570 1358 aa10.68□□□□□ -0.7
RNU1-56P-201ENST00000391303 ACIN1Q9UKV3 1341 aaKnown RBP10.68□□□□□ -0.7
RNU1-56P-201ENST00000391303 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
RNU1-56P-201ENST00000391303 TET3O43151 1660 aa10.68□□□□□ -0.7
RNU1-56P-201ENST00000391303 NKTRP30414 1462 aaKnown RBP10.68□□□□□ -0.7
RNU1-56P-201ENST00000391303 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
RNU1-56P-201ENST00000391303 SCAF1Q9H7N4 1312 aaKnown RBP10.67□□□□□ -0.7
RNU1-56P-201ENST00000391303 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
RNU1-56P-201ENST00000391303 HSPA1LP34931 641 aa10.67□□□□□ -0.7
RNU1-56P-201ENST00000391303 ITGAEP38570 1179 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms