RNA–Protein interactions for RNA: ENST00000389594.7

CCDC196-202, Transcript of coiled-coil domain containing 196, humanhuman

TSL 5

Gene CCDC196, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-202ENST00000389594 CLIP1P30622 1438 aa12.97□□□□□ -0.33
CCDC196-202ENST00000389594 MLECQ14165 292 aa12.97□□□□□ -0.33
CCDC196-202ENST00000389594 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
CCDC196-202ENST00000389594 MROH2AA6NES4 1674 aa12.96□□□□□ -0.34
CCDC196-202ENST00000389594 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
CCDC196-202ENST00000389594 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
CCDC196-202ENST00000389594 UHRF1BP1Q6BDS2 1440 aa12.95□□□□□ -0.34
CCDC196-202ENST00000389594 TRAPPC8Q9Y2L5 1435 aa12.95□□□□□ -0.34
CCDC196-202ENST00000389594 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
CCDC196-202ENST00000389594 CDK11AQ9UQ88 783 aaPredicted RBP12.94□□□□□ -0.34
CCDC196-202ENST00000389594 CASKIN1Q8WXD9 1431 aa12.94□□□□□ -0.34
CCDC196-202ENST00000389594 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
CCDC196-202ENST00000389594 EVX2Q03828 476 aa12.93□□□□□ -0.34
CCDC196-202ENST00000389594 SAMD9LQ8IVG5 1584 aa12.93□□□□□ -0.34
CCDC196-202ENST00000389594 LTBP4Q8N2S1 1624 aa12.91□□□□□ -0.34
CCDC196-202ENST00000389594 PTPRTO14522 1441 aa12.91□□□□□ -0.34
CCDC196-202ENST00000389594 HAX1O00165 279 aa12.91□□□□□ -0.34
CCDC196-202ENST00000389594 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
CCDC196-202ENST00000389594 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
CCDC196-202ENST00000389594 PLXNC1O60486 1568 aa12.9□□□□□ -0.34
CCDC196-202ENST00000389594 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.35
CCDC196-202ENST00000389594 ZNF142P52746 1687 aaPredicted RBP12.89□□□□□ -0.35
CCDC196-202ENST00000389594 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
CCDC196-202ENST00000389594 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
CCDC196-202ENST00000389594 IQSEC2Q5JU85 1478 aa12.88□□□□□ -0.35
CCDC196-202ENST00000389594 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
CCDC196-202ENST00000389594 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
CCDC196-202ENST00000389594 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
CCDC196-202ENST00000389594 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
CCDC196-202ENST00000389594 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
CCDC196-202ENST00000389594 MYO3AQ8NEV4 1616 aa12.86□□□□□ -0.35
CCDC196-202ENST00000389594 NPATQ14207 1427 aa12.86□□□□□ -0.35
CCDC196-202ENST00000389594 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
CCDC196-202ENST00000389594 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
CCDC196-202ENST00000389594 GPATCH8Q9UKJ3 1502 aaKnown RBP12.85□□□□□ -0.35
CCDC196-202ENST00000389594 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
CCDC196-202ENST00000389594 CAMSAP1Q5T5Y3 1602 aa12.84□□□□□ -0.35
CCDC196-202ENST00000389594 SPATA31D1Q6ZQQ2 1576 aa12.82□□□□□ -0.36
CCDC196-202ENST00000389594 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
CCDC196-202ENST00000389594 ADGBQ8N7X0 1667 aa12.82□□□□□ -0.36
CCDC196-202ENST00000389594 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
CCDC196-202ENST00000389594 PLA2R1Q13018 1463 aa12.8□□□□□ -0.36
CCDC196-202ENST00000389594 CEP170BQ9Y4F5 1589 aaPredicted RBP12.8□□□□□ -0.36
CCDC196-202ENST00000389594 TCOF1Q13428 1488 aaKnown RBP12.79□□□□□ -0.36
CCDC196-202ENST00000389594 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
CCDC196-202ENST00000389594 TIAM1Q13009 1591 aa12.79□□□□□ -0.36
CCDC196-202ENST00000389594 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
CCDC196-202ENST00000389594 A2MP01023 1474 aa12.78□□□□□ -0.36
CCDC196-202ENST00000389594 NUBP1P53384 320 aa12.78□□□□□ -0.36
CCDC196-202ENST00000389594 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
CCDC196-202ENST00000389594 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
CCDC196-202ENST00000389594 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
CCDC196-202ENST00000389594 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
CCDC196-202ENST00000389594 PTPRKQ15262 1439 aa12.77□□□□□ -0.37
CCDC196-202ENST00000389594 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
CCDC196-202ENST00000389594 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
CCDC196-202ENST00000389594 ESF1Q9H501 851 aaKnown RBP12.75□□□□□ -0.37
CCDC196-202ENST00000389594 MBD5Q9P267 1494 aa12.75□□□□□ -0.37
CCDC196-202ENST00000389594 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
CCDC196-202ENST00000389594 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
CCDC196-202ENST00000389594 DNMT1P26358 1616 aaKnown RBP12.74□□□□□ -0.37
CCDC196-202ENST00000389594 EHBP1L1Q8N3D4 1523 aa12.74□□□□□ -0.37
CCDC196-202ENST00000389594 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
CCDC196-202ENST00000389594 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
CCDC196-202ENST00000389594 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
CCDC196-202ENST00000389594 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC196-202ENST00000389594 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
CCDC196-202ENST00000389594 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.37
CCDC196-202ENST00000389594 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
CCDC196-202ENST00000389594 ZNF335Q9H4Z2 1342 aaPredicted RBP12.7□□□□□ -0.38
CCDC196-202ENST00000389594 SOCS7O14512 581 aa12.7□□□□□ -0.38
CCDC196-202ENST00000389594 ZNF777Q9ULD5 760 aaPredicted RBP12.7□□□□□ -0.38
CCDC196-202ENST00000389594 A2ML1A8K2U0 1454 aa12.7□□□□□ -0.38
CCDC196-202ENST00000389594 PKD2Q13563 968 aa12.69□□□□□ -0.38
CCDC196-202ENST00000389594 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
CCDC196-202ENST00000389594 CFDP1Q9UEE9 299 aaPredicted RBP12.69□□□□□ -0.38
CCDC196-202ENST00000389594 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
CCDC196-202ENST00000389594 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
CCDC196-202ENST00000389594 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
CCDC196-202ENST00000389594 MTUS2Q5JR59 1369 aa12.68□□□□□ -0.38
CCDC196-202ENST00000389594 PZPP20742 1482 aa12.66□□□□□ -0.38
CCDC196-202ENST00000389594 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
CCDC196-202ENST00000389594 DHX29Q7Z478 1369 aaKnown RBP12.66□□□□□ -0.38
CCDC196-202ENST00000389594 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
CCDC196-202ENST00000389594 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
CCDC196-202ENST00000389594 ZNF644Q9H582 1327 aaPredicted RBP12.65□□□□□ -0.38
CCDC196-202ENST00000389594 ARHGEF5Q12774 1597 aa12.65□□□□□ -0.38
CCDC196-202ENST00000389594 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
CCDC196-202ENST00000389594 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
CCDC196-202ENST00000389594 ALKQ9UM73 1620 aa12.65□□□□□ -0.38
CCDC196-202ENST00000389594 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
CCDC196-202ENST00000389594 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
CCDC196-202ENST00000389594 CPS1P31327 1500 aa12.64□□□□□ -0.39
CCDC196-202ENST00000389594 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
CCDC196-202ENST00000389594 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
CCDC196-202ENST00000389594 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
CCDC196-202ENST00000389594 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
CCDC196-202ENST00000389594 GGT6Q6P531 493 aa12.63□□□□□ -0.39
CCDC196-202ENST00000389594 MAST1Q9Y2H9 1570 aa12.62□□□□□ -0.39
CCDC196-202ENST00000389594 NCOA2Q15596 1464 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms