RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 DCAF5Q96JK2 942 aa0.21□□□□□ -2.38
RNU6-1340P-201ENST00000384438 ACSS3Q9H6R3 686 aa0.21□□□□□ -2.38
RNU6-1340P-201ENST00000384438 TRPC6Q9Y210 931 aa0.21□□□□□ -2.38
RNU6-1340P-201ENST00000384438 TIE1P35590 1138 aa0.2□□□□□ -2.38
RNU6-1340P-201ENST00000384438 LILRA6Q6PI73 481 aa0.2□□□□□ -2.38
RNU6-1340P-201ENST00000384438 NPAS3Q8IXF0 933 aa0.2□□□□□ -2.38
RNU6-1340P-201ENST00000384438 TTC13Q8NBP0 860 aa0.2□□□□□ -2.38
RNU6-1340P-201ENST00000384438 VWCEQ96DN2 955 aa0.2□□□□□ -2.38
RNU6-1340P-201ENST00000384438 RNF114Q9Y508 228 aa0.2□□□□□ -2.38
RNU6-1340P-201ENST00000384438 PRR29P0C7W0 189 aa0.19□□□□□ -2.38
RNU6-1340P-201ENST00000384438 PBX2P40425 430 aa0.19□□□□□ -2.38
RNU6-1340P-201ENST00000384438 NXF1Q9UBU9 619 aaKnown RBP0.19□□□□□ -2.38
RNU6-1340P-201ENST00000384438 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
RNU6-1340P-201ENST00000384438 MDN1Q9NU22 5596 aa0.19□□□□□ -2.38
RNU6-1340P-201ENST00000384438 H3BM21 787 aa0.18□□□□□ -2.38
RNU6-1340P-201ENST00000384438 CAPNS1P04632 268 aa0.18□□□□□ -2.38
RNU6-1340P-201ENST00000384438 ZNF710Q8N1W2 664 aa0.18□□□□□ -2.38
RNU6-1340P-201ENST00000384438 KRTAP4-1Q9BYQ7 146 aa0.18□□□□□ -2.38
RNU6-1340P-201ENST00000384438 TTLL13PA6NNM8 815 aa0.17□□□□□ -2.38
RNU6-1340P-201ENST00000384438 AMHP03971 560 aa0.17□□□□□ -2.38
RNU6-1340P-201ENST00000384438 IRX5P78411 483 aaPredicted RBP0.17□□□□□ -2.38
RNU6-1340P-201ENST00000384438 TMPRSS5Q9H3S3 457 aa0.17□□□□□ -2.38
RNU6-1340P-201ENST00000384438 PLCG2P16885 1265 aa0.16□□□□□ -2.38
RNU6-1340P-201ENST00000384438 ATXN1P54253 815 aaKnown RBP0.16□□□□□ -2.38
RNU6-1340P-201ENST00000384438 DPY19L2Q6NUT2 758 aa0.16□□□□□ -2.38
RNU6-1340P-201ENST00000384438 THSD4Q6ZMP0 1018 aa0.16□□□□□ -2.38
RNU6-1340P-201ENST00000384438 DBX2Q6ZNG2 339 aa0.16□□□□□ -2.38
RNU6-1340P-201ENST00000384438 IGSF5Q9NSI5 407 aa0.16□□□□□ -2.38
RNU6-1340P-201ENST00000384438 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
RNU6-1340P-201ENST00000384438 KRT10P13645 584 aa0.15□□□□□ -2.39
RNU6-1340P-201ENST00000384438 TGM1P22735 817 aa0.15□□□□□ -2.39
RNU6-1340P-201ENST00000384438 KRTAP5-10Q6L8G5 202 aa0.15□□□□□ -2.39
RNU6-1340P-201ENST00000384438 SEMA6BQ9H3T3 888 aa0.15□□□□□ -2.39
RNU6-1340P-201ENST00000384438 FAM187AA6NFU0 413 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 TK2O00142 265 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 PAK3O75914 559 aaPredicted RBP0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 ARHGEF15O94989 841 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 C8AP07357 584 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 PRR20EP86478 221 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 PRR20CP86479 221 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 PRR20DP86480 221 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 PRR20BP86481 221 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 PRR20AP86496 221 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 TRIM47Q96LD4 638 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 TRIM35Q9UPQ4 493 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 AXIN2Q9Y2T1 843 aa0.14□□□□□ -2.39
RNU6-1340P-201ENST00000384438 HYAL3O43820 417 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1340P-201ENST00000384438 KRTAP10-12P60413 245 aa0.13□□□□□ -2.39
RNU6-1340P-201ENST00000384438 KCNC4Q03721 635 aa0.13□□□□□ -2.39
RNU6-1340P-201ENST00000384438 DMRTA1Q5VZB9 504 aa0.13□□□□□ -2.39
RNU6-1340P-201ENST00000384438 ATG9BQ674R7 924 aa0.13□□□□□ -2.39
RNU6-1340P-201ENST00000384438 SCARF2Q96GP6 870 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1340P-201ENST00000384438 VSIG8P0DPA2 414 aa0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 LRP8Q14114 963 aa0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 DOK7Q18PE1 504 aa0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 LCE3AQ5TA76 89 aa0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 GPR153Q6NV75 609 aa0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 BHLHA9Q7RTU4 235 aa0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 ZNF764Q96H86 408 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 CRELD1Q96HD1 420 aa0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 ZBTB12Q9Y330 459 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 FCGBPQ9Y6R7 5405 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1340P-201ENST00000384438 AVPP01185 164 aa0.11□□□□□ -2.39
RNU6-1340P-201ENST00000384438 TAL1P17542 331 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1340P-201ENST00000384438 VEGFBP49765 207 aa0.11□□□□□ -2.39
RNU6-1340P-201ENST00000384438 KRTAP10-1P60331 282 aa0.11□□□□□ -2.39
RNU6-1340P-201ENST00000384438 TNFRSF18Q9Y5U5 241 aa0.11□□□□□ -2.39
RNU6-1340P-201ENST00000384438 SMCPP49901 116 aaPredicted RBP0.1□□□□□ -2.39
RNU6-1340P-201ENST00000384438 ZNF385CQ66K41 422 aaPredicted RBP0.1□□□□□ -2.39
RNU6-1340P-201ENST00000384438 GGNQ86UU5 652 aa0.1□□□□□ -2.39
RNU6-1340P-201ENST00000384438 ZSWIM6Q9HCJ5 1215 aa0.1□□□□□ -2.39
RNU6-1340P-201ENST00000384438 ZNF316A6NFI3 1004 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1340P-201ENST00000384438 CD97P48960 835 aa0.09□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KRTAP10-8P60410 259 aa0.09□□□□□ -2.4
RNU6-1340P-201ENST00000384438 LRCH2Q5VUJ6 765 aa0.09□□□□□ -2.4
RNU6-1340P-201ENST00000384438 C3orf67Q6ZVT6 689 aa0.09□□□□□ -2.4
RNU6-1340P-201ENST00000384438 EHMT2Q96KQ7 1210 aa0.09□□□□□ -2.4
RNU6-1340P-201ENST00000384438 OCEL1Q9H607 264 aa0.09□□□□□ -2.4
RNU6-1340P-201ENST00000384438 AXIN1O15169 862 aa0.08□□□□□ -2.4
RNU6-1340P-201ENST00000384438 ERBB2P04626 1255 aa0.08□□□□□ -2.4
RNU6-1340P-201ENST00000384438 MARSP56192 900 aaKnown RBP0.08□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KRTAP10-2P60368 255 aa0.08□□□□□ -2.4
RNU6-1340P-201ENST00000384438 CTC1Q2NKJ3 1217 aa0.07□□□□□ -2.4
RNU6-1340P-201ENST00000384438 SALL3Q9BXA9 1300 aa0.07□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KRBA1A5PL33 1030 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 SPDYE2BA6NHP3 402 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 CYSRT1A8MQ03 144 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 RIMBP2O15034 1052 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 SPDYE6P0CI01 402 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 SPDYE2Q495Y8 402 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 LCE1AQ5T7P2 110 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 OGFOD2Q6N063 350 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 POU5F2Q8N7G0 328 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 BRIP1Q9BX63 1249 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 SENP2Q9HC62 589 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 CRCT1Q9UGL9 99 aa0.06□□□□□ -2.4
RNU6-1340P-201ENST00000384438 GDF9O60383 454 aa0.05□□□□□ -2.4
RNU6-1340P-201ENST00000384438 PPP1R18Q6NYC8 613 aa0.05□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KIF12Q96FN5 646 aa0.05□□□□□ -2.4
RNU6-1340P-201ENST00000384438 ATP13A2Q9NQ11 1180 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms